EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000003704 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 61440 bases
Position: chrMCGX01038931.1:1375319-1436758
Accession: 108525011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000001175	Rif1_N	PF12231.8	7.1e-78	1	1
ENSRBIP00000001173	Rif1_N	PF12231.8	7.2e-78	1	1
ENSRBIP00000001167	Rif1_N	PF12231.8	7.2e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000006659	RIF1-201	7335	-	ENSRBIP00000001167	2444 (aa)	-	A0A2K6JQ75
ENSRBIT00000006680	RIF1-202	7323	XM_017866070	ENSRBIP00000001173	2440 (aa)	XP_017721559	A0A2K6JQ80
ENSRBIT00000006703	RIF1-203	7257	-	ENSRBIP00000001175	2418 (aa)	-	A0A2K6JQ85

Gene Model

Click here to download ENSRBIG00000003704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000003704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000003704	RIF1	100	94.498	ENSG00000080345	RIF1	97	98.538	Homo_sapiens
ENSRBIG00000003704	RIF1	99	79.556	ENSAMEG00000008461	RIF1	100	79.516	Ailuropoda_melanoleuca
ENSRBIG00000003704	RIF1	63	49.843	ENSACIG00000017765	rif1	69	49.843	Amphilophus_citrinellus
ENSRBIG00000003704	RIF1	51	49.796	ENSAOCG00000017231	rif1	50	49.558	Amphiprion_ocellaris
ENSRBIG00000003704	RIF1	70	54.843	ENSAPEG00000013228	rif1	51	54.843	Amphiprion_percula
ENSRBIG00000003704	RIF1	65	47.823	ENSATEG00000022887	rif1	68	47.823	Anabas_testudineus
ENSRBIG00000003704	RIF1	84	66.181	ENSAPLG00000007092	RIF1	92	65.889	Anas_platyrhynchos
ENSRBIG00000003704	RIF1	85	55.342	ENSACAG00000003714	RIF1	91	55.342	Anolis_carolinensis
ENSRBIG00000003704	RIF1	100	89.365	ENSANAG00000024840	RIF1	100	89.244	Aotus_nancymaae
ENSRBIG00000003704	RIF1	63	45.736	ENSAMXG00000010910	rif1	51	51.692	Astyanax_mexicanus
ENSRBIG00000003704	RIF1	94	78.255	ENSBTAG00000021020	RIF1	99	78.255	Bos_taurus
ENSRBIG00000003704	RIF1	100	88.844	ENSCJAG00000003138	RIF1	100	88.723	Callithrix_jacchus
ENSRBIG00000003704	RIF1	100	78.086	ENSCAFG00000005670	RIF1	97	77.925	Canis_familiaris
ENSRBIG00000003704	RIF1	100	77.317	ENSCAFG00020016401	RIF1	100	77.156	Canis_lupus_dingo
ENSRBIG00000003704	RIF1	100	78.387	ENSCHIG00000020327	RIF1	100	78.387	Capra_hircus
ENSRBIG00000003704	RIF1	99	78.862	ENSTSYG00000008861	RIF1	100	78.862	Carlito_syrichta
ENSRBIG00000003704	RIF1	79	86.047	ENSCAPG00000008957	RIF1	96	86.047	Cavia_aperea
ENSRBIG00000003704	RIF1	99	70.475	ENSCPOG00000037898	RIF1	99	70.423	Cavia_porcellus
ENSRBIG00000003704	RIF1	100	88.233	ENSCCAG00000024760	RIF1	100	88.071	Cebus_capucinus
ENSRBIG00000003704	RIF1	100	96.560	ENSCATG00000033353	RIF1	100	96.560	Cercocebus_atys
ENSRBIG00000003704	RIF1	96	73.283	ENSCLAG00000001517	RIF1	99	73.157	Chinchilla_lanigera
ENSRBIG00000003704	RIF1	100	96.479	ENSCSAG00000016089	RIF1	100	96.479	Chlorocebus_sabaeus
ENSRBIG00000003704	RIF1	97	78.261	ENSCHOG00000007187	RIF1	97	78.261	Choloepus_hoffmanni
ENSRBIG00000003704	RIF1	90	72.781	ENSCPBG00000025885	RIF1	95	73.887	Chrysemys_picta_bellii
ENSRBIG00000003704	RIF1	100	95.833	ENSCANG00000028962	RIF1	100	96.997	Colobus_angolensis_palliatus
ENSRBIG00000003704	RIF1	99	69.425	ENSCGRG00001024589	Rif1	100	69.293	Cricetulus_griseus_chok1gshd
ENSRBIG00000003704	RIF1	99	70.485	ENSCGRG00000010713	Rif1	100	70.526	Cricetulus_griseus_crigri
ENSRBIG00000003704	RIF1	65	48.131	ENSCVAG00000022479	rif1	70	47.975	Cyprinodon_variegatus
ENSRBIG00000003704	RIF1	99	76.235	ENSDNOG00000011194	RIF1	97	76.235	Dasypus_novemcinctus
ENSRBIG00000003704	RIF1	94	71.612	ENSETEG00000012421	RIF1	92	71.537	Echinops_telfairi
ENSRBIG00000003704	RIF1	91	92.079	ENSEASG00005023434	RIF1	98	92.079	Equus_asinus_asinus
ENSRBIG00000003704	RIF1	96	90.799	ENSECAG00000012679	RIF1	100	90.799	Equus_caballus
ENSRBIG00000003704	RIF1	67	48.618	ENSELUG00000006826	rif1	59	48.187	Esox_lucius
ENSRBIG00000003704	RIF1	100	78.511	ENSFCAG00000029742	RIF1	100	78.592	Felis_catus
ENSRBIG00000003704	RIF1	78	64.329	ENSFALG00000013874	RIF1	91	64.939	Ficedula_albicollis
ENSRBIG00000003704	RIF1	99	74.526	ENSFDAG00000006538	RIF1	99	74.485	Fukomys_damarensis
ENSRBIG00000003704	RIF1	58	52.747	ENSGMOG00000003517	rif1	89	51.261	Gadus_morhua
ENSRBIG00000003704	RIF1	79	65.294	ENSGALG00000012484	RIF1	91	65.294	Gallus_gallus
ENSRBIG00000003704	RIF1	65	50.648	ENSGAFG00000017196	rif1	70	53.490	Gambusia_affinis
ENSRBIG00000003704	RIF1	59	55.285	ENSGACG00000008579	rif1	65	54.800	Gasterosteus_aculeatus
ENSRBIG00000003704	RIF1	88	72.455	ENSGAGG00000012595	RIF1	97	73.574	Gopherus_agassizii
ENSRBIG00000003704	RIF1	90	98.999	ENSGGOG00000040178	RIF1	96	98.999	Gorilla_gorilla
ENSRBIG00000003704	RIF1	71	50.873	ENSHBUG00000007125	rif1	54	50.713	Haplochromis_burtoni
ENSRBIG00000003704	RIF1	94	74.180	ENSHGLG00100009807	RIF1	99	73.700	Heterocephalus_glaber_male
ENSRBIG00000003704	RIF1	65	47.243	ENSHCOG00000015943	rif1	61	47.090	Hippocampus_comes
ENSRBIG00000003704	RIF1	100	76.803	ENSSTOG00000020712	RIF1	100	76.692	Ictidomys_tridecemlineatus
ENSRBIG00000003704	RIF1	99	69.209	ENSJJAG00000023000	Rif1	100	69.048	Jaculus_jaculus
ENSRBIG00000003704	RIF1	62	50.564	ENSLBEG00000023196	rif1	58	50.403	Labrus_bergylta
ENSRBIG00000003704	RIF1	86	63.905	ENSLACG00000005425	RIF1	91	63.905	Latimeria_chalumnae
ENSRBIG00000003704	RIF1	62	53.275	ENSLOCG00000002657	rif1	82	52.581	Lepisosteus_oculatus
ENSRBIG00000003704	RIF1	99	77.124	ENSLAFG00000009796	RIF1	100	77.106	Loxodonta_africana
ENSRBIG00000003704	RIF1	100	96.601	ENSMFAG00000032233	RIF1	100	96.601	Macaca_fascicularis
ENSRBIG00000003704	RIF1	100	96.560	ENSMMUG00000008611	RIF1	100	96.560	Macaca_mulatta
ENSRBIG00000003704	RIF1	100	96.520	ENSMNEG00000031616	RIF1	100	96.520	Macaca_nemestrina
ENSRBIG00000003704	RIF1	100	96.682	ENSMLEG00000042945	RIF1	100	96.682	Mandrillus_leucophaeus
ENSRBIG00000003704	RIF1	75	48.916	ENSMAMG00000001745	rif1	64	49.046	Mastacembelus_armatus
ENSRBIG00000003704	RIF1	63	50.803	ENSMZEG00005020920	rif1	68	50.641	Maylandia_zebra
ENSRBIG00000003704	RIF1	84	62.040	ENSMGAG00000012732	RIF1	91	62.040	Meleagris_gallopavo
ENSRBIG00000003704	RIF1	94	90.251	ENSMAUG00000013158	Rif1	99	90.251	Mesocricetus_auratus
ENSRBIG00000003704	RIF1	100	83.434	ENSMICG00000046127	RIF1	100	83.266	Microcebus_murinus
ENSRBIG00000003704	RIF1	99	69.572	ENSMOCG00000009381	Rif1	100	69.383	Microtus_ochrogaster
ENSRBIG00000003704	RIF1	62	49.322	ENSMMOG00000006519	rif1	64	48.846	Mola_mola
ENSRBIG00000003704	RIF1	100	59.832	ENSMODG00000003703	RIF1	100	59.624	Monodelphis_domestica
ENSRBIG00000003704	RIF1	63	48.916	ENSMALG00000016759	rif1	66	52.131	Monopterus_albus
ENSRBIG00000003704	RIF1	99	68.334	MGP_CAROLIEiJ_G0023555	Rif1	100	68.536	Mus_caroli
ENSRBIG00000003704	RIF1	99	68.956	ENSMUSG00000036202	Rif1	100	69.157	Mus_musculus
ENSRBIG00000003704	RIF1	99	67.568	MGP_PahariEiJ_G0025006	Rif1	100	67.527	Mus_pahari
ENSRBIG00000003704	RIF1	99	68.856	MGP_SPRETEiJ_G0024476	Rif1	100	68.896	Mus_spretus
ENSRBIG00000003704	RIF1	100	78.816	ENSMPUG00000000371	RIF1	100	78.816	Mustela_putorius_furo
ENSRBIG00000003704	RIF1	90	76.109	ENSMLUG00000003376	RIF1	100	76.109	Myotis_lucifugus
ENSRBIG00000003704	RIF1	100	72.177	ENSNGAG00000009268	Rif1	100	71.843	Nannospalax_galili
ENSRBIG00000003704	RIF1	68	50.040	ENSNBRG00000014257	rif1	68	49.761	Neolamprologus_brichardi
ENSRBIG00000003704	RIF1	100	93.607	ENSNLEG00000010955	RIF1	100	93.607	Nomascus_leucogenys
ENSRBIG00000003704	RIF1	82	78.222	ENSMEUG00000007601	-	88	78.222	Notamacropus_eugenii
ENSRBIG00000003704	RIF1	99	71.262	ENSODEG00000003950	RIF1	99	71.584	Octodon_degus
ENSRBIG00000003704	RIF1	75	49.091	ENSONIG00000013657	rif1	60	49.507	Oreochromis_niloticus
ENSRBIG00000003704	RIF1	76	74.011	ENSOANG00000006078	-	79	74.011	Ornithorhynchus_anatinus
ENSRBIG00000003704	RIF1	100	76.058	ENSOCUG00000017435	RIF1	100	75.877	Oryctolagus_cuniculus
ENSRBIG00000003704	RIF1	64	48.392	ENSORLG00020001302	rif1	69	47.766	Oryzias_latipes_hni
ENSRBIG00000003704	RIF1	62	48.722	ENSORLG00015000009	rif1	66	47.847	Oryzias_latipes_hsok
ENSRBIG00000003704	RIF1	62	48.320	ENSOMEG00000021513	rif1	66	48.516	Oryzias_melastigma
ENSRBIG00000003704	RIF1	99	80.444	ENSOGAG00000006141	RIF1	99	80.323	Otolemur_garnettii
ENSRBIG00000003704	RIF1	100	78.347	ENSOARG00000008930	RIF1	100	78.347	Ovis_aries
ENSRBIG00000003704	RIF1	100	94.258	ENSPPAG00000023754	RIF1	100	94.258	Pan_paniscus
ENSRBIG00000003704	RIF1	100	78.479	ENSPPRG00000003618	RIF1	100	78.560	Panthera_pardus
ENSRBIG00000003704	RIF1	100	78.520	ENSPTIG00000020652	RIF1	100	78.600	Panthera_tigris_altaica
ENSRBIG00000003704	RIF1	100	94.339	ENSPTRG00000012534	RIF1	100	94.339	Pan_troglodytes
ENSRBIG00000003704	RIF1	100	96.358	ENSPANG00000008525	RIF1	100	96.358	Papio_anubis
ENSRBIG00000003704	RIF1	63	51.702	ENSPKIG00000004267	rif1	68	51.888	Paramormyrops_kingsleyae
ENSRBIG00000003704	RIF1	65	46.296	ENSPMGG00000016141	rif1	82	44.321	Periophthalmus_magnuspinnatus
ENSRBIG00000003704	RIF1	99	71.247	ENSPEMG00000000446	Rif1	99	71.236	Peromyscus_maniculatus_bairdii
ENSRBIG00000003704	RIF1	99	59.230	ENSPCIG00000009185	RIF1	99	58.691	Phascolarctos_cinereus
ENSRBIG00000003704	RIF1	63	50.512	ENSPFOG00000017804	rif1	69	50.557	Poecilia_formosa
ENSRBIG00000003704	RIF1	56	50.546	ENSPFOG00000000554	-	67	50.364	Poecilia_formosa
ENSRBIG00000003704	RIF1	63	50.478	ENSPLAG00000017945	rif1	72	50.359	Poecilia_latipinna
ENSRBIG00000003704	RIF1	54	64.894	ENSPREG00000018052	rif1	69	53.406	Poecilia_reticulata
ENSRBIG00000003704	RIF1	100	94.620	ENSPPYG00000012846	RIF1	100	94.620	Pongo_abelii
ENSRBIG00000003704	RIF1	82	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSRBIG00000003704	RIF1	100	83.831	ENSPCOG00000027888	RIF1	100	83.831	Propithecus_coquereli
ENSRBIG00000003704	RIF1	93	89.228	ENSPVAG00000014276	RIF1	95	89.228	Pteropus_vampyrus
ENSRBIG00000003704	RIF1	71	48.991	ENSPNYG00000012940	rif1	80	48.832	Pundamilia_nyererei
ENSRBIG00000003704	RIF1	62	54.194	ENSPNAG00000016685	rif1	64	54.194	Pygocentrus_nattereri
ENSRBIG00000003704	RIF1	99	68.114	ENSRNOG00000054901	Rif1	100	68.061	Rattus_norvegicus
ENSRBIG00000003704	RIF1	100	98.705	ENSRROG00000028206	RIF1	100	98.705	Rhinopithecus_roxellana
ENSRBIG00000003704	RIF1	97	97.849	ENSSBOG00000029530	RIF1	100	97.849	Saimiri_boliviensis_boliviensis
ENSRBIG00000003704	RIF1	99	59.313	ENSSHAG00000018552	RIF1	100	58.408	Sarcophilus_harrisii
ENSRBIG00000003704	RIF1	62	52.462	ENSSFOG00015021539	rif1	75	52.666	Scleropages_formosus
ENSRBIG00000003704	RIF1	50	49.215	ENSSMAG00000011704	rif1	65	49.174	Scophthalmus_maximus
ENSRBIG00000003704	RIF1	62	50.162	ENSSDUG00000015632	rif1	78	47.890	Seriola_dumerili
ENSRBIG00000003704	RIF1	50	49.960	ENSSLDG00000019531	rif1	54	47.311	Seriola_lalandi_dorsalis
ENSRBIG00000003704	RIF1	62	84.407	ENSSARG00000007161	-	62	84.407	Sorex_araneus
ENSRBIG00000003704	RIF1	88	71.257	ENSSPUG00000003062	RIF1	91	71.257	Sphenodon_punctatus
ENSRBIG00000003704	RIF1	50	57.582	ENSSPAG00000018359	rif1	75	57.582	Stegastes_partitus
ENSRBIG00000003704	RIF1	100	78.896	ENSSSCG00000016395	RIF1	100	78.453	Sus_scrofa
ENSRBIG00000003704	RIF1	68	48.618	ENSTRUG00000015808	rif1	75	47.777	Takifugu_rubripes
ENSRBIG00000003704	RIF1	68	49.036	ENSTNIG00000011538	rif1	78	47.072	Tetraodon_nigroviridis
ENSRBIG00000003704	RIF1	83	90.506	ENSTBEG00000016082	RIF1	81	90.506	Tupaia_belangeri
ENSRBIG00000003704	RIF1	100	79.686	ENSTTRG00000011190	RIF1	100	79.686	Tursiops_truncatus
ENSRBIG00000003704	RIF1	90	78.680	ENSUAMG00000026385	RIF1	99	78.635	Ursus_americanus
ENSRBIG00000003704	RIF1	100	79.654	ENSUMAG00000000337	RIF1	100	79.613	Ursus_maritimus
ENSRBIG00000003704	RIF1	100	78.577	ENSVPAG00000002162	RIF1	100	78.383	Vicugna_pacos
ENSRBIG00000003704	RIF1	100	77.478	ENSVVUG00000011293	RIF1	100	77.276	Vulpes_vulpes
ENSRBIG00000003704	RIF1	99	44.295	ENSXETG00000004530	rif1	91	54.073	Xenopus_tropicalis
ENSRBIG00000003704	RIF1	65	48.284	ENSXMAG00000000506	rif1	66	48.287	Xiphophorus_maculatus