EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRBIG00000004781 (Gene tree)
Gene ID
-
Gene Symbol
DDX42
Alias
RHELP|RNAHP|SF3B8|SF3b125
Full Name
DEAD-box helicase 42
Gene Type
protein_coding
Species
Rhinopithecus_bieti
Status
putative
Strand
Minus strand
Length
46449 bases
Position
chrMCGX01004791.1:1061859-1108307
Accession
108536273
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRBIP00000001142ResIIIPF04851.153.7e-0711
ENSRBIP00000001139ResIIIPF04851.155.7e-0711
ENSRBIP00000001131ResIIIPF04851.158.9e-0711
ENSRBIP00000001126ResIIIPF04851.159.1e-0711
ENSRBIP00000001110ResIIIPF04851.159.2e-0711
ENSRBIP00000001112ResIIIPF04851.151.1e-0611
ENSRBIP00000001142DEADPF00270.294.3e-5011
ENSRBIP00000001139DEADPF00270.297e-5011
ENSRBIP00000001131DEADPF00270.299.1e-5011
ENSRBIP00000001126DEADPF00270.299.3e-5011
ENSRBIP00000001110DEADPF00270.299.4e-5011
ENSRBIP00000001112DEADPF00270.291.2e-4911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRBIT00000006352DDX42-2023298-ENSRBIP000000011121004 (aa)-A0A2K6JQ20
ENSRBIT00000006475DDX42-2042778-ENSRBIP00000001131925 (aa)-A0A2K6JQ18
ENSRBIT00000006328DDX42-2013924XM_017882889ENSRBIP00000001110937 (aa)XP_017738378A0A2K6JQ22
ENSRBIT00000006540DDX42-2062103-ENSRBIP00000001142700 (aa)-A0A2K6JQ49
ENSRBIT00000006448DDX42-2032799-ENSRBIP00000001126932 (aa)-A0A2K6JQ15
ENSRBIT00000006521DDX42-2052457XM_017882890ENSRBIP00000001139818 (aa)XP_017738379A0A2K6JQ43
Gene Model
Click here to download ENSRBIG00000004781's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000004781's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRBIG00000004781DDX425032.603ENSRBIG00000044699DDX556132.877
ENSRBIG00000004781DDX425230.914ENSRBIG00000037555-7630.914
ENSRBIG00000004781DDX426533.043ENSRBIG00000043232DDX597333.043
ENSRBIG00000004781DDX425434.177ENSRBIG00000030758DDX497834.177
ENSRBIG00000004781DDX425530.287ENSRBIG00000029705EIF4A39030.729
ENSRBIG00000004781DDX426438.298ENSRBIG00000038465DDX418235.849
ENSRBIG00000004781DDX427838.061ENSRBIG00000038867DDX58441.042
ENSRBIG00000004781DDX425531.920ENSRBIG00000032462DDX526431.920
ENSRBIG00000004781DDX425132.345ENSRBIG00000036313DDX185632.376
ENSRBIG00000004781DDX425131.117ENSRBIG00000036352DDX39A9030.153
ENSRBIG00000004781DDX425032.791ENSRBIG00000042841-6132.791
ENSRBIG00000004781DDX425032.976ENSRBIG00000032422DDX3Y6532.708
ENSRBIG00000004781DDX425130.769ENSRBIG00000032545DDX67230.769
ENSRBIG00000004781DDX425038.202ENSRBIG00000026934DDX477638.202
ENSRBIG00000004781DDX426337.389ENSRBIG00000043253DDX438437.389
ENSRBIG00000004781DDX425334.586ENSRBIG00000036337-5235.000
ENSRBIG00000004781DDX426143.880ENSRBIG00000031437DDX178343.440
ENSRBIG00000004781DDX425033.871ENSRBIG00000043721-7033.065
ENSRBIG00000004781DDX425638.424ENSRBIG00000028795DDX47636.264
ENSRBIG00000004781DDX425636.804ENSRBIG00000042259DDX3X7135.794
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRBIG00000004781DDX4210099.147ENSG00000198231DDX42100100.000Homo_sapiens
ENSRBIG00000004781DDX429481.118ENSAPOG00000017675ddx429774.463Acanthochromis_polyacanthus
ENSRBIG00000004781DDX429997.986ENSAMEG00000003200DDX4210096.684Ailuropoda_melanoleuca
ENSRBIG00000004781DDX429181.649ENSACIG00000007376ddx429972.877Amphilophus_citrinellus
ENSRBIG00000004781DDX429481.231ENSAOCG00000003520ddx429972.152Amphiprion_ocellaris
ENSRBIG00000004781DDX429481.627ENSAPEG00000000984ddx429972.352Amphiprion_percula
ENSRBIG00000004781DDX429479.552ENSATEG00000022920ddx429972.930Anabas_testudineus
ENSRBIG00000004781DDX429990.701ENSAPLG00000010544DDX4210085.134Anas_platyrhynchos
ENSRBIG00000004781DDX429989.065ENSACAG00000003994DDX429984.739Anolis_carolinensis
ENSRBIG00000004781DDX4210098.294ENSANAG00000035693DDX4210098.294Aotus_nancymaae
ENSRBIG00000004781DDX429481.409ENSACLG00000025113ddx429973.106Astatotilapia_calliptera
ENSRBIG00000004781DDX429083.994ENSAMXG00000011435ddx4210069.846Astyanax_mexicanus
ENSRBIG00000004781DDX429996.835ENSBTAG00000021058DDX4210094.872Bos_taurus
ENSRBIG00000004781DDX428452.532WBGene00008119C46F11.47852.895Caenorhabditis_elegans
ENSRBIG00000004781DDX4210098.294ENSCJAG00000019649DDX429999.477Callithrix_jacchus
ENSRBIG00000004781DDX429997.698ENSCAFG00000012818DDX4210096.253Canis_familiaris
ENSRBIG00000004781DDX429997.842ENSCAFG00020026631DDX4210096.360Canis_lupus_dingo
ENSRBIG00000004781DDX429997.701ENSCHIG00000014431DDX4210095.527Capra_hircus
ENSRBIG00000004781DDX429997.122ENSTSYG00000001380DDX4210094.973Carlito_syrichta
ENSRBIG00000004781DDX429675.708ENSCAPG00000013621DDX429475.592Cavia_aperea
ENSRBIG00000004781DDX429997.122ENSCPOG00000005633DDX4210095.279Cavia_porcellus
ENSRBIG00000004781DDX429998.699ENSCCAG00000020612DDX4210097.912Cebus_capucinus
ENSRBIG00000004781DDX4210099.680ENSCATG00000030490DDX4210099.680Cercocebus_atys
ENSRBIG00000004781DDX429997.410ENSCLAG00000003497DDX4210096.026Chinchilla_lanigera
ENSRBIG00000004781DDX4210095.966ENSCSAG00000003914DDX4210095.966Chlorocebus_sabaeus
ENSRBIG00000004781DDX427995.495ENSCHOG00000006241DDX427995.495Choloepus_hoffmanni
ENSRBIG00000004781DDX429791.324ENSCPBG00000026682DDX4210084.559Chrysemys_picta_bellii
ENSRBIG00000004781DDX426466.368ENSCING00000001837-9467.991Ciona_intestinalis
ENSRBIG00000004781DDX425571.802ENSCSAVG00000002180-9972.178Ciona_savignyi
ENSRBIG00000004781DDX4210099.857ENSCANG00000034663DDX4210099.857Colobus_angolensis_palliatus
ENSRBIG00000004781DDX429996.547ENSCGRG00001009775Ddx4210094.946Cricetulus_griseus_chok1gshd
ENSRBIG00000004781DDX429996.547ENSCGRG00000011718Ddx4210094.946Cricetulus_griseus_crigri
ENSRBIG00000004781DDX429479.248ENSCSEG00000021574ddx429968.803Cynoglossus_semilaevis
ENSRBIG00000004781DDX429480.303ENSCVAG00000011404ddx429972.009Cyprinodon_variegatus
ENSRBIG00000004781DDX429183.072ENSDARG00000037928ddx429970.886Danio_rerio
ENSRBIG00000004781DDX4210089.339ENSDNOG00000007961DDX4210089.339Dasypus_novemcinctus
ENSRBIG00000004781DDX429993.094ENSDORG00000004199Ddx4210087.245Dipodomys_ordii
ENSRBIG00000004781DDX428062.324FBgn0036104CG64188756.133Drosophila_melanogaster
ENSRBIG00000004781DDX428976.153ENSEBUG00000001155ddx429173.210Eptatretus_burgeri
ENSRBIG00000004781DDX429997.986ENSEASG00005013089DDX4210096.699Equus_asinus_asinus
ENSRBIG00000004781DDX429998.129ENSECAG00000022684DDX4210096.699Equus_caballus
ENSRBIG00000004781DDX4267100.000ENSEEUG00000009144DDX4285100.000Erinaceus_europaeus
ENSRBIG00000004781DDX429379.819ENSELUG00000020593ddx4210070.886Esox_lucius
ENSRBIG00000004781DDX429998.561ENSFCAG00000003499DDX4210097.109Felis_catus
ENSRBIG00000004781DDX429890.435ENSFALG00000004675DDX427488.228Ficedula_albicollis
ENSRBIG00000004781DDX429997.410ENSFDAG00000020516DDX4210095.708Fukomys_damarensis
ENSRBIG00000004781DDX429975.668ENSFHEG00000023290ddx429971.050Fundulus_heteroclitus
ENSRBIG00000004781DDX428379.387ENSGMOG00000004595ddx428878.279Gadus_morhua
ENSRBIG00000004781DDX429592.814ENSGALG00000000581DDX4210083.577Gallus_gallus
ENSRBIG00000004781DDX429479.819ENSGAFG00000011846ddx429574.074Gambusia_affinis
ENSRBIG00000004781DDX429972.443ENSGACG00000009782ddx429968.240Gasterosteus_aculeatus
ENSRBIG00000004781DDX429791.016ENSGAGG00000024411DDX429984.211Gopherus_agassizii
ENSRBIG00000004781DDX4210099.147ENSGGOG00000006779DDX4210099.147Gorilla_gorilla
ENSRBIG00000004781DDX429481.409ENSHBUG00000008705ddx429973.319Haplochromis_burtoni
ENSRBIG00000004781DDX4210091.505ENSHGLG00000010024DDX4210091.505Heterocephalus_glaber_female
ENSRBIG00000004781DDX429997.122ENSHGLG00100004479-10095.931Heterocephalus_glaber_male
ENSRBIG00000004781DDX429973.851ENSHGLG00100007138-9573.020Heterocephalus_glaber_male
ENSRBIG00000004781DDX429082.222ENSHCOG00000003357ddx429675.336Hippocampus_comes
ENSRBIG00000004781DDX428983.706ENSIPUG00000013327ddx4210070.032Ictalurus_punctatus
ENSRBIG00000004781DDX429997.989ENSSTOG00000008922DDX4210096.599Ictidomys_tridecemlineatus
ENSRBIG00000004781DDX429996.691ENSJJAG00000011727Ddx4210095.059Jaculus_jaculus
ENSRBIG00000004781DDX429479.730ENSKMAG00000009914ddx429971.970Kryptolebias_marmoratus
ENSRBIG00000004781DDX429177.399ENSLBEG00000004687ddx429967.553Labrus_bergylta
ENSRBIG00000004781DDX428987.520ENSLACG00000013476DDX429778.341Latimeria_chalumnae
ENSRBIG00000004781DDX429980.603ENSLOCG00000011764ddx4210075.108Lepisosteus_oculatus
ENSRBIG00000004781DDX429997.266ENSLAFG00000003249DDX4210096.043Loxodonta_africana
ENSRBIG00000004781DDX4210099.680ENSMFAG00000031356DDX4210099.680Macaca_fascicularis
ENSRBIG00000004781DDX4210099.253ENSMMUG00000016762DDX4210099.633Macaca_mulatta
ENSRBIG00000004781DDX4210099.680ENSMNEG00000038250DDX4210099.680Macaca_nemestrina
ENSRBIG00000004781DDX4210099.787ENSMLEG00000043080DDX4210099.787Mandrillus_leucophaeus
ENSRBIG00000004781DDX429481.476ENSMAMG00000021888ddx429871.533Mastacembelus_armatus
ENSRBIG00000004781DDX429481.409ENSMZEG00005023103ddx429973.106Maylandia_zebra
ENSRBIG00000004781DDX429791.837ENSMGAG00000001822DDX4210083.891Meleagris_gallopavo
ENSRBIG00000004781DDX429997.110ENSMAUG00000020774-9496.591Mesocricetus_auratus
ENSRBIG00000004781DDX429997.983ENSMICG00000009952DDX4210096.663Microcebus_murinus
ENSRBIG00000004781DDX429996.691ENSMOCG00000015504Ddx4210094.301Microtus_ochrogaster
ENSRBIG00000004781DDX429176.719ENSMMOG00000016963ddx428671.330Mola_mola
ENSRBIG00000004781DDX425097.859ENSMODG00000009917-9897.859Monodelphis_domestica
ENSRBIG00000004781DDX429480.995ENSMALG00000007800ddx429972.950Monopterus_albus
ENSRBIG00000004781DDX429997.554MGP_CAROLIEiJ_G0017314Ddx4210095.806Mus_caroli
ENSRBIG00000004781DDX429997.410ENSMUSG00000020705Ddx4210095.806Mus_musculus
ENSRBIG00000004781DDX427999.460MGP_PahariEiJ_G0018444-10099.254Mus_pahari
ENSRBIG00000004781DDX429997.698MGP_SPRETEiJ_G0018158Ddx4210095.914Mus_spretus
ENSRBIG00000004781DDX429998.417ENSMPUG00000014921DDX4210096.596Mustela_putorius_furo
ENSRBIG00000004781DDX429997.554ENSMLUG00000011645DDX4210094.858Myotis_lucifugus
ENSRBIG00000004781DDX429997.989ENSNGAG00000021897Ddx4210096.013Nannospalax_galili
ENSRBIG00000004781DDX429479.610ENSNBRG00000004466ddx429971.825Neolamprologus_brichardi
ENSRBIG00000004781DDX4210099.041ENSNLEG00000004248DDX4210099.041Nomascus_leucogenys
ENSRBIG00000004781DDX428582.616ENSMEUG00000013227-8582.616Notamacropus_eugenii
ENSRBIG00000004781DDX429996.835ENSOPRG00000014960DDX4210094.586Ochotona_princeps
ENSRBIG00000004781DDX4210092.481ENSODEG00000007810DDX4210092.481Octodon_degus
ENSRBIG00000004781DDX429481.409ENSONIG00000000734ddx429973.212Oreochromis_niloticus
ENSRBIG00000004781DDX427791.993ENSOANG00000000265DDX4210092.022Ornithorhynchus_anatinus
ENSRBIG00000004781DDX429996.695ENSOCUG00000004304DDX428994.812Oryctolagus_cuniculus
ENSRBIG00000004781DDX428983.148ENSORLG00000002395ddx4210069.515Oryzias_latipes
ENSRBIG00000004781DDX428983.466ENSORLG00020011621ddx4210071.882Oryzias_latipes_hni
ENSRBIG00000004781DDX428983.307ENSORLG00015004487ddx4210071.670Oryzias_latipes_hsok
ENSRBIG00000004781DDX429381.402ENSOMEG00000020093ddx4210071.593Oryzias_melastigma
ENSRBIG00000004781DDX429997.983ENSOGAG00000006872DDX4210096.068Otolemur_garnettii
ENSRBIG00000004781DDX429997.557ENSOARG00000013540DDX4210094.726Ovis_aries
ENSRBIG00000004781DDX4210099.360ENSPPAG00000007496DDX4210099.360Pan_paniscus
ENSRBIG00000004781DDX429998.417ENSPPRG00000002740DDX4210097.002Panthera_pardus
ENSRBIG00000004781DDX429998.417ENSPTIG00000009932DDX4210096.895Panthera_tigris_altaica
ENSRBIG00000004781DDX4210099.360ENSPTRG00000009523DDX4210099.360Pan_troglodytes
ENSRBIG00000004781DDX4210099.680ENSPANG00000020990DDX4210099.680Papio_anubis
ENSRBIG00000004781DDX428983.651ENSPKIG00000002901ddx429970.968Paramormyrops_kingsleyae
ENSRBIG00000004781DDX429791.813ENSPSIG00000010289DDX429891.502Pelodiscus_sinensis
ENSRBIG00000004781DDX428980.542ENSPMGG00000009323ddx4210068.684Periophthalmus_magnuspinnatus
ENSRBIG00000004781DDX429997.122ENSPEMG00000006755Ddx4210095.166Peromyscus_maniculatus_bairdii
ENSRBIG00000004781DDX428975.039ENSPMAG00000005580ddx4210073.097Petromyzon_marinus
ENSRBIG00000004781DDX429993.840ENSPCIG00000009093DDX4210091.534Phascolarctos_cinereus
ENSRBIG00000004781DDX429480.873ENSPFOG00000014104ddx429971.623Poecilia_formosa
ENSRBIG00000004781DDX429480.723ENSPLAG00000010522ddx429971.473Poecilia_latipinna
ENSRBIG00000004781DDX429480.723ENSPMEG00000010744ddx429971.895Poecilia_mexicana
ENSRBIG00000004781DDX429480.120ENSPREG00000009926ddx429971.384Poecilia_reticulata
ENSRBIG00000004781DDX4210096.815ENSPPYG00000008531DDX4210096.815Pongo_abelii
ENSRBIG00000004781DDX429989.928ENSPCAG00000002474DDX4210089.663Procavia_capensis
ENSRBIG00000004781DDX4210087.152ENSPCOG00000001559DDX429988.905Propithecus_coquereli
ENSRBIG00000004781DDX429995.396ENSPVAG00000000160DDX4210092.021Pteropus_vampyrus
ENSRBIG00000004781DDX429278.274ENSPNYG00000013954ddx429770.366Pundamilia_nyererei
ENSRBIG00000004781DDX428983.866ENSPNAG00000017352ddx429969.525Pygocentrus_nattereri
ENSRBIG00000004781DDX429997.266ENSRNOG00000009474Ddx4210095.376Rattus_norvegicus
ENSRBIG00000004781DDX4210099.893ENSRROG00000029794DDX4210099.893Rhinopithecus_roxellana
ENSRBIG00000004781DDX4210098.294ENSSBOG00000029624DDX4210098.294Saimiri_boliviensis_boliviensis
ENSRBIG00000004781DDX429994.269ENSSHAG00000012896-10091.852Sarcophilus_harrisii
ENSRBIG00000004781DDX428161.573ENSSHAG00000007919-9961.128Sarcophilus_harrisii
ENSRBIG00000004781DDX429381.791ENSSFOG00015014064ddx428380.128Scleropages_formosus
ENSRBIG00000004781DDX429480.665ENSSMAG00000009077ddx429971.907Scophthalmus_maximus
ENSRBIG00000004781DDX429480.328ENSSDUG00000022221ddx429971.816Seriola_dumerili
ENSRBIG00000004781DDX429480.363ENSSLDG00000018483ddx429971.792Seriola_lalandi_dorsalis
ENSRBIG00000004781DDX429997.122ENSSARG00000009847DDX4210095.208Sorex_araneus
ENSRBIG00000004781DDX429990.429ENSSPUG00000018806DDX4210084.958Sphenodon_punctatus
ENSRBIG00000004781DDX429480.960ENSSPAG00000013055ddx429972.304Stegastes_partitus
ENSRBIG00000004781DDX429897.813ENSSSCG00000017289DDX429794.789Sus_scrofa
ENSRBIG00000004781DDX429990.831ENSTGUG00000001931DDX4210083.738Taeniopygia_guttata
ENSRBIG00000004781DDX429479.549ENSTRUG00000010711ddx429981.556Takifugu_rubripes
ENSRBIG00000004781DDX429192.801ENSTBEG00000010159DDX429993.421Tupaia_belangeri
ENSRBIG00000004781DDX429997.845ENSTTRG00000006962DDX4210096.261Tursiops_truncatus
ENSRBIG00000004781DDX429997.986ENSUAMG00000007321DDX4210096.257Ursus_americanus
ENSRBIG00000004781DDX429997.986ENSUMAG00000017438DDX4210095.615Ursus_maritimus
ENSRBIG00000004781DDX4210087.487ENSVPAG00000009633DDX4210087.487Vicugna_pacos
ENSRBIG00000004781DDX429997.986ENSVVUG00000006095DDX4210096.574Vulpes_vulpes
ENSRBIG00000004781DDX429982.066ENSXETG00000003245ddx4210076.440Xenopus_tropicalis
ENSRBIG00000004781DDX429180.811ENSXCOG00000017560ddx429771.879Xiphophorus_couchianus
ENSRBIG00000004781DDX429480.572ENSXMAG00000008138ddx429972.601Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us