EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000007566 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 9372 bases
Position: chrMCGX01010198.1:1613839-1623210
Accession: 108512333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000001678	RRM_1	PF00076.22	8.6e-18	1	1
ENSRBIP00000001646	RRM_1	PF00076.22	9.3e-18	1	1
ENSRBIP00000001605	RRM_1	PF00076.22	1e-17	1	1
ENSRBIP00000001663	RRM_1	PF00076.22	1e-17	1	1
ENSRBIP00000001720	RRM_1	PF00076.22	8.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000009194	RBM42-203	1707	XM_017847566	ENSRBIP00000001663	480 (aa)	XP_017703055	A0A2K6JRL5
ENSRBIT00000008902	RBM42-201	1425	-	ENSRBIP00000001605	474 (aa)	-	A0A2K6JRG1
ENSRBIT00000009472	RBM42-206	555	-	ENSRBIP00000001720	184 (aa)	-	A0A2K6JRS7
ENSRBIT00000009089	RBM42-202	1625	XM_017847567	ENSRBIP00000001646	451 (aa)	XP_017703056	A0A2K6JRK2
ENSRBIT00000009305	RBM42-204	1281	-	ENSRBIP00000001678	426 (aa)	-	A0A2K6JRN1
ENSRBIT00000009314	RBM42-205	1161	-	ENSRBIP00000001682	386 (aa)	-	A0A2K6JRM7

Gene Model

Click here to download ENSRBIG00000007566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000007566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000007566	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSRBIG00000007566	RBM42	100	97.510	ENSAMEG00000000524	RBM42	100	97.510	Ailuropoda_melanoleuca
ENSRBIG00000007566	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSRBIG00000007566	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	97.917	Bos_taurus
ENSRBIG00000007566	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSRBIG00000007566	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSRBIG00000007566	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	98.448	Capra_hircus
ENSRBIG00000007566	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSRBIG00000007566	RBM42	81	98.187	ENSCAPG00000009566	RBM42	99	98.187	Cavia_aperea
ENSRBIG00000007566	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.783	Cavia_porcellus
ENSRBIG00000007566	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSRBIG00000007566	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSRBIG00000007566	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.118	Chinchilla_lanigera
ENSRBIG00000007566	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	100.000	Chlorocebus_sabaeus
ENSRBIG00000007566	RBM42	99	90.254	ENSCANG00000030272	RBM42	100	88.750	Colobus_angolensis_palliatus
ENSRBIG00000007566	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	96.842	Cricetulus_griseus_chok1gshd
ENSRBIG00000007566	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.687	Dasypus_novemcinctus
ENSRBIG00000007566	RBM42	97	100.000	ENSDORG00000013001	Rbm42	99	96.639	Dipodomys_ordii
ENSRBIG00000007566	RBM42	91	92.754	ENSETEG00000007878	RBM42	71	92.857	Echinops_telfairi
ENSRBIG00000007566	RBM42	100	97.783	ENSEASG00005001074	RBM42	100	97.783	Equus_asinus_asinus
ENSRBIG00000007566	RBM42	100	97.783	ENSECAG00000018215	RBM42	100	97.783	Equus_caballus
ENSRBIG00000007566	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSRBIG00000007566	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.247	Fukomys_damarensis
ENSRBIG00000007566	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSRBIG00000007566	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSRBIG00000007566	RBM42	100	95.798	ENSHGLG00000008418	RBM42	99	95.798	Heterocephalus_glaber_female
ENSRBIG00000007566	RBM42	100	95.798	ENSHGLG00100018667	RBM42	99	95.798	Heterocephalus_glaber_male
ENSRBIG00000007566	RBM42	100	100.000	ENSSTOG00000013050	RBM42	99	98.004	Ictidomys_tridecemlineatus
ENSRBIG00000007566	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.406	Jaculus_jaculus
ENSRBIG00000007566	RBM42	98	94.692	ENSLAFG00000014993	RBM42	99	91.458	Loxodonta_africana
ENSRBIG00000007566	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSRBIG00000007566	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSRBIG00000007566	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSRBIG00000007566	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000007566	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSRBIG00000007566	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.429	Microtus_ochrogaster
ENSRBIG00000007566	RBM42	84	100.000	ENSMODG00000013957	RBM42	82	82.803	Monodelphis_domestica
ENSRBIG00000007566	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.059	Mus_caroli
ENSRBIG00000007566	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.059	Mus_musculus
ENSRBIG00000007566	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.059	Mus_pahari
ENSRBIG00000007566	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.059	Mus_spretus
ENSRBIG00000007566	RBM42	100	98.004	ENSMPUG00000006288	RBM42	100	98.004	Mustela_putorius_furo
ENSRBIG00000007566	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	96.458	Myotis_lucifugus
ENSRBIG00000007566	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.639	Nannospalax_galili
ENSRBIG00000007566	RBM42	85	85.792	ENSNLEG00000011272	-	94	92.179	Nomascus_leucogenys
ENSRBIG00000007566	RBM42	96	83.188	ENSMEUG00000016300	RBM42	100	81.429	Notamacropus_eugenii
ENSRBIG00000007566	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	91.667	Ochotona_princeps
ENSRBIG00000007566	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.339	Octodon_degus
ENSRBIG00000007566	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	98.226	Oryctolagus_cuniculus
ENSRBIG00000007566	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.083	Otolemur_garnettii
ENSRBIG00000007566	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	92.693	Ovis_aries
ENSRBIG00000007566	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSRBIG00000007566	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSRBIG00000007566	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSRBIG00000007566	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSRBIG00000007566	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSRBIG00000007566	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.479	Peromyscus_maniculatus_bairdii
ENSRBIG00000007566	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	81.818	Phascolarctos_cinereus
ENSRBIG00000007566	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	98.763	Pongo_abelii
ENSRBIG00000007566	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	82.292	Procavia_capensis
ENSRBIG00000007566	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSRBIG00000007566	RBM42	97	75.638	ENSPCOG00000020672	RBM42	81	98.799	Propithecus_coquereli
ENSRBIG00000007566	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	97.500	Pteropus_vampyrus
ENSRBIG00000007566	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.269	Rattus_norvegicus
ENSRBIG00000007566	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000007566	RBM42	90	98.695	ENSSBOG00000030666	RBM42	100	99.507	Saimiri_boliviensis_boliviensis
ENSRBIG00000007566	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSRBIG00000007566	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.339	Sus_scrofa
ENSRBIG00000007566	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	97.708	Ursus_americanus
ENSRBIG00000007566	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	97.708	Ursus_maritimus
ENSRBIG00000007566	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.783	Vulpes_vulpes