EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000008552 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 4688 bases
Position: chrMCGX01015983.1:695426-700113
Accession: 108518847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000001701	MMR_HSR1	PF01926.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000009413	-	1207	XM_017857528	ENSRBIP00000001701	203 (aa)	XP_017713017	A0A2K6JRQ5
ENSRBIT00000009477	-	375	-	ENSRBIP00000001722	124 (aa)	-	A0A2K6JRR8

Gene Model

Click here to download ENSRBIG00000008552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000008552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000008552	-	78	30.189	ENSRBIG00000033607	-	67	30.189
ENSRBIG00000008552	-	78	42.405	ENSRBIG00000031164	RAB6B	76	42.405
ENSRBIG00000008552	-	79	37.423	ENSRBIG00000038196	MRAS	78	37.423
ENSRBIG00000008552	-	85	42.197	ENSRBIG00000044154	RAB25	81	42.197
ENSRBIG00000008552	-	80	38.323	ENSRBIG00000034869	RAB7A	81	38.323
ENSRBIG00000008552	-	62	31.429	ENSRBIG00000044065	ARFRP1	67	31.429
ENSRBIG00000008552	-	91	36.757	ENSRBIG00000037160	KRAS	98	37.436
ENSRBIG00000008552	-	83	47.929	ENSRBIG00000037603	RAB2A	80	47.929
ENSRBIG00000008552	-	79	39.506	ENSRBIG00000034835	HRAS	85	39.506
ENSRBIG00000008552	-	86	46.629	ENSRBIG00000031945	RAB39B	84	46.629
ENSRBIG00000008552	-	84	53.529	ENSRBIG00000030112	RAB15	94	57.143
ENSRBIG00000008552	-	83	41.379	ENSRBIG00000008435	RAB33B	76	41.379
ENSRBIG00000008552	-	84	39.011	ENSRBIG00000038841	RAB34	70	39.011
ENSRBIG00000008552	-	69	32.624	ENSRBIG00000037389	-	69	32.624
ENSRBIG00000008552	-	79	37.888	ENSRBIG00000027991	RAB41	72	37.888
ENSRBIG00000008552	-	75	37.662	ENSRBIG00000030547	RAB23	63	37.662
ENSRBIG00000008552	-	95	37.500	ENSRBIG00000031376	RAB5C	89	37.500
ENSRBIG00000008552	-	95	36.458	ENSRBIG00000013165	RAB5B	89	36.458
ENSRBIG00000008552	-	95	39.583	ENSRBIG00000036122	RAB5A	89	39.583
ENSRBIG00000008552	-	78	43.671	ENSRBIG00000030390	RAB6A	76	43.671
ENSRBIG00000008552	-	84	51.744	ENSRBIG00000028760	RAB12	74	51.744
ENSRBIG00000008552	-	87	56.111	ENSRBIG00000037235	-	97	56.111
ENSRBIG00000008552	-	67	30.882	ENSRBIG00000039868	ARF5	72	30.882
ENSRBIG00000008552	-	91	54.348	ENSRBIG00000035442	RAB1B	92	54.348
ENSRBIG00000008552	-	91	36.702	ENSRBIG00000037689	RAB22A	97	36.702
ENSRBIG00000008552	-	81	44.242	ENSRBIG00000036040	RAB14	77	44.242
ENSRBIG00000008552	-	79	38.272	ENSRBIG00000043132	NRAS	85	38.272
ENSRBIG00000008552	-	87	42.781	ENSRBIG00000027902	RAB33A	79	42.781
ENSRBIG00000008552	-	80	49.383	ENSRBIG00000039227	RAB30	80	49.383
ENSRBIG00000008552	-	83	35.632	ENSRBIG00000036581	RERG	84	35.632
ENSRBIG00000008552	-	83	30.114	ENSRBIG00000041935	-	90	30.818
ENSRBIG00000008552	-	83	48.214	ENSRBIG00000027517	RAB2B	81	48.214
ENSRBIG00000008552	-	81	47.273	ENSRBIG00000035649	RAB11A	76	47.273
ENSRBIG00000008552	-	86	44.318	ENSRBIG00000035948	RAB18	85	44.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000008552	-	100	99.507	ENSG00000143545	RAB13	100	99.507	Homo_sapiens
ENSRBIG00000008552	-	99	75.622	ENSACIG00000008584	rab13	97	75.622	Amphilophus_citrinellus
ENSRBIG00000008552	-	100	98.030	ENSANAG00000030247	-	100	98.030	Aotus_nancymaae
ENSRBIG00000008552	-	99	79.208	ENSAMXG00000030712	rab13	99	79.208	Astyanax_mexicanus
ENSRBIG00000008552	-	100	97.537	ENSBTAG00000017604	RAB13	100	97.537	Bos_taurus
ENSRBIG00000008552	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSRBIG00000008552	-	100	98.522	ENSCJAG00000009933	-	100	98.522	Callithrix_jacchus
ENSRBIG00000008552	-	100	97.044	ENSCHIG00000022271	-	100	97.044	Capra_hircus
ENSRBIG00000008552	-	99	90.594	ENSCPOG00000011491	-	99	90.594	Cavia_porcellus
ENSRBIG00000008552	-	100	99.015	ENSCCAG00000028502	-	100	99.015	Cebus_capucinus
ENSRBIG00000008552	-	100	99.507	ENSCATG00000041779	-	100	99.507	Cercocebus_atys
ENSRBIG00000008552	-	100	90.640	ENSCLAG00000006603	-	100	90.640	Chinchilla_lanigera
ENSRBIG00000008552	-	100	99.507	ENSCANG00000036573	-	100	99.507	Colobus_angolensis_palliatus
ENSRBIG00000008552	-	100	95.074	ENSCGRG00001021505	Rab13	100	95.074	Cricetulus_griseus_chok1gshd
ENSRBIG00000008552	-	100	95.074	ENSCGRG00000012126	Rab13	100	95.074	Cricetulus_griseus_crigri
ENSRBIG00000008552	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSRBIG00000008552	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSRBIG00000008552	-	100	94.089	ENSDORG00000001591	Rab13	100	94.089	Dipodomys_ordii
ENSRBIG00000008552	-	100	98.030	ENSEASG00005000683	-	100	98.030	Equus_asinus_asinus
ENSRBIG00000008552	-	100	98.030	ENSECAG00000016551	RAB13	100	98.030	Equus_caballus
ENSRBIG00000008552	-	99	89.604	ENSEEUG00000001233	-	99	89.604	Erinaceus_europaeus
ENSRBIG00000008552	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSRBIG00000008552	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSRBIG00000008552	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSRBIG00000008552	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSRBIG00000008552	-	99	76.238	ENSGACG00000011925	rab13	99	76.238	Gasterosteus_aculeatus
ENSRBIG00000008552	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSRBIG00000008552	-	100	99.507	ENSGGOG00000023693	RAB13	100	99.507	Gorilla_gorilla
ENSRBIG00000008552	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSRBIG00000008552	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSRBIG00000008552	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSRBIG00000008552	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSRBIG00000008552	-	100	96.552	ENSSTOG00000011222	-	100	96.552	Ictidomys_tridecemlineatus
ENSRBIG00000008552	-	100	92.611	ENSJJAG00000010575	Rab13	100	92.611	Jaculus_jaculus
ENSRBIG00000008552	-	99	76.000	ENSKMAG00000001908	rab13	99	76.000	Kryptolebias_marmoratus
ENSRBIG00000008552	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSRBIG00000008552	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSRBIG00000008552	-	100	99.507	ENSMFAG00000041018	RAB13	100	99.507	Macaca_fascicularis
ENSRBIG00000008552	-	100	99.507	ENSMNEG00000028951	-	100	99.507	Macaca_nemestrina
ENSRBIG00000008552	-	100	99.507	ENSMLEG00000042247	-	100	99.507	Mandrillus_leucophaeus
ENSRBIG00000008552	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSRBIG00000008552	-	100	94.089	ENSMAUG00000015713	Rab13	100	94.089	Mesocricetus_auratus
ENSRBIG00000008552	-	100	96.552	ENSMICG00000010340	-	100	96.552	Microcebus_murinus
ENSRBIG00000008552	-	100	95.074	ENSMOCG00000021448	Rab13	100	95.074	Microtus_ochrogaster
ENSRBIG00000008552	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSRBIG00000008552	-	100	92.118	MGP_CAROLIEiJ_G0025227	Rab13	100	92.118	Mus_caroli
ENSRBIG00000008552	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSRBIG00000008552	-	99	91.584	MGP_PahariEiJ_G0026671	Rab13	99	91.584	Mus_pahari
ENSRBIG00000008552	-	100	95.074	ENSNGAG00000010309	Rab13	100	95.074	Nannospalax_galili
ENSRBIG00000008552	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSRBIG00000008552	-	100	99.507	ENSNLEG00000028944	-	100	99.507	Nomascus_leucogenys
ENSRBIG00000008552	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSRBIG00000008552	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSRBIG00000008552	-	100	89.163	ENSODEG00000010443	-	100	89.163	Octodon_degus
ENSRBIG00000008552	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSRBIG00000008552	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSRBIG00000008552	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSRBIG00000008552	-	99	93.564	ENSOGAG00000016969	-	99	93.564	Otolemur_garnettii
ENSRBIG00000008552	-	100	99.507	ENSPPAG00000028435	-	100	99.507	Pan_paniscus
ENSRBIG00000008552	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSRBIG00000008552	-	100	99.507	ENSPTRG00000001370	RAB13	100	99.507	Pan_troglodytes
ENSRBIG00000008552	-	100	99.507	ENSPANG00000004479	-	100	99.507	Papio_anubis
ENSRBIG00000008552	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSRBIG00000008552	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSRBIG00000008552	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSRBIG00000008552	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSRBIG00000008552	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSRBIG00000008552	-	100	99.507	ENSPPYG00000000790	-	100	99.507	Pongo_abelii
ENSRBIG00000008552	-	100	97.537	ENSPCOG00000012189	-	100	97.537	Propithecus_coquereli
ENSRBIG00000008552	-	100	94.581	ENSPVAG00000011095	-	100	94.581	Pteropus_vampyrus
ENSRBIG00000008552	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSRBIG00000008552	-	100	92.118	ENSRNOG00000016733	Rab13	100	92.118	Rattus_norvegicus
ENSRBIG00000008552	-	100	100.000	ENSRROG00000036885	-	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000008552	-	100	98.522	ENSSBOG00000020342	-	100	98.522	Saimiri_boliviensis_boliviensis
ENSRBIG00000008552	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSRBIG00000008552	-	100	98.030	ENSSSCG00000006564	-	100	98.030	Sus_scrofa
ENSRBIG00000008552	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSRBIG00000008552	-	100	96.552	ENSTBEG00000012734	-	100	96.552	Tupaia_belangeri
ENSRBIG00000008552	-	100	99.015	ENSTTRG00000011183	-	100	99.015	Tursiops_truncatus
ENSRBIG00000008552	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSRBIG00000008552	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus