EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000011760 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrMCGX01022254.1:53618-54766
Accession: 108522529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000002378	RRM_5	PF13893.6	5.1e-13	1	2
ENSRBIP00000002378	RRM_5	PF13893.6	5.1e-13	2	2
ENSRBIP00000002378	RRM_1	PF00076.22	3.6e-77	1	4
ENSRBIP00000002378	RRM_1	PF00076.22	3.6e-77	2	4
ENSRBIP00000002378	RRM_1	PF00076.22	3.6e-77	3	4
ENSRBIP00000002378	RRM_1	PF00076.22	3.6e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000012792	PABPC5-201	1149	XM_017862778	ENSRBIP00000002378	382 (aa)	XP_017718267	A0A2K6JTM9

Gene Model

Click here to download ENSRBIG00000011760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000011760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000011760	PABPC5	95	61.667	ENSRBIG00000029759	-	68	61.032
ENSRBIG00000011760	PABPC5	93	59.694	ENSRBIG00000027173	-	98	59.375
ENSRBIG00000011760	PABPC5	96	62.259	ENSRBIG00000034396	PABPC3	58	62.360
ENSRBIG00000011760	PABPC5	96	66.942	ENSRBIG00000039761	PABPC4	60	67.135
ENSRBIG00000011760	PABPC5	94	35.802	ENSRBIG00000029495	ELAVL2	88	35.802
ENSRBIG00000011760	PABPC5	98	44.947	ENSRBIG00000027660	-	63	46.450
ENSRBIG00000011760	PABPC5	95	63.636	ENSRBIG00000028738	-	68	63.764
ENSRBIG00000011760	PABPC5	74	30.508	ENSRBIG00000029083	TRNAU1AP	58	30.409
ENSRBIG00000011760	PABPC5	96	59.615	ENSRBIG00000030229	PABPC4L	98	59.551
ENSRBIG00000011760	PABPC5	96	59.780	ENSRBIG00000035381	PABPC1L	61	59.831
ENSRBIG00000011760	PABPC5	98	50.266	ENSRBIG00000000042	-	85	50.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000011760	PABPC5	100	99.738	ENSG00000174740	PABPC5	100	99.738	Homo_sapiens
ENSRBIG00000011760	PABPC5	99	97.375	ENSAMEG00000020114	PABPC5	100	97.375	Ailuropoda_melanoleuca
ENSRBIG00000011760	PABPC5	100	99.738	ENSANAG00000005063	PABPC5	100	99.738	Aotus_nancymaae
ENSRBIG00000011760	PABPC5	99	96.588	ENSBTAG00000019942	PABPC5	99	96.588	Bos_taurus
ENSRBIG00000011760	PABPC5	100	99.215	ENSCJAG00000003665	PABPC5	100	99.215	Callithrix_jacchus
ENSRBIG00000011760	PABPC5	99	96.850	ENSCAFG00000017452	PABPC5	99	96.850	Canis_familiaris
ENSRBIG00000011760	PABPC5	99	96.588	ENSCHIG00000019004	PABPC5	99	96.588	Capra_hircus
ENSRBIG00000011760	PABPC5	99	97.638	ENSTSYG00000036351	PABPC5	99	97.638	Carlito_syrichta
ENSRBIG00000011760	PABPC5	99	88.421	ENSCAPG00000010714	PABPC5	99	88.421	Cavia_aperea
ENSRBIG00000011760	PABPC5	99	94.488	ENSCPOG00000002555	PABPC5	99	94.488	Cavia_porcellus
ENSRBIG00000011760	PABPC5	100	99.738	ENSCCAG00000032154	PABPC5	100	99.738	Cebus_capucinus
ENSRBIG00000011760	PABPC5	100	100.000	ENSCATG00000043083	PABPC5	100	100.000	Cercocebus_atys
ENSRBIG00000011760	PABPC5	99	95.801	ENSCLAG00000000647	PABPC5	99	95.801	Chinchilla_lanigera
ENSRBIG00000011760	PABPC5	100	100.000	ENSCSAG00000000065	PABPC5	100	100.000	Chlorocebus_sabaeus
ENSRBIG00000011760	PABPC5	100	100.000	ENSCANG00000011473	PABPC5	100	100.000	Colobus_angolensis_palliatus
ENSRBIG00000011760	PABPC5	99	94.488	ENSCGRG00000018699	Pabpc5	99	94.488	Cricetulus_griseus_crigri
ENSRBIG00000011760	PABPC5	99	78.534	ENSETEG00000011832	PABPC5	99	78.534	Echinops_telfairi
ENSRBIG00000011760	PABPC5	99	97.375	ENSEASG00005014396	PABPC5	99	97.375	Equus_asinus_asinus
ENSRBIG00000011760	PABPC5	99	97.375	ENSECAG00000003452	PABPC5	99	97.375	Equus_caballus
ENSRBIG00000011760	PABPC5	99	97.113	ENSFCAG00000004998	PABPC5	99	97.113	Felis_catus
ENSRBIG00000011760	PABPC5	99	96.325	ENSFDAG00000000126	PABPC5	99	96.325	Fukomys_damarensis
ENSRBIG00000011760	PABPC5	100	99.738	ENSGGOG00000007622	PABPC5	100	99.738	Gorilla_gorilla
ENSRBIG00000011760	PABPC5	95	97.235	ENSJJAG00000011960	Pabpc5	99	97.235	Jaculus_jaculus
ENSRBIG00000011760	PABPC5	100	100.000	ENSMFAG00000024561	PABPC5	100	100.000	Macaca_fascicularis
ENSRBIG00000011760	PABPC5	100	100.000	ENSMMUG00000011562	PABPC5	100	100.000	Macaca_mulatta
ENSRBIG00000011760	PABPC5	100	100.000	ENSMNEG00000037604	PABPC5	100	100.000	Macaca_nemestrina
ENSRBIG00000011760	PABPC5	100	100.000	ENSMLEG00000028318	PABPC5	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000011760	PABPC5	99	96.325	ENSMICG00000041706	PABPC5	99	96.325	Microcebus_murinus
ENSRBIG00000011760	PABPC5	99	95.801	ENSMOCG00000001554	Pabpc5	99	95.801	Microtus_ochrogaster
ENSRBIG00000011760	PABPC5	99	94.723	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.723	Mus_caroli
ENSRBIG00000011760	PABPC5	99	95.251	ENSMUSG00000034732	Pabpc5	99	95.251	Mus_musculus
ENSRBIG00000011760	PABPC5	99	95.538	MGP_PahariEiJ_G0031908	Pabpc5	99	95.538	Mus_pahari
ENSRBIG00000011760	PABPC5	99	95.251	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.251	Mus_spretus
ENSRBIG00000011760	PABPC5	99	96.588	ENSMPUG00000018465	PABPC5	99	96.588	Mustela_putorius_furo
ENSRBIG00000011760	PABPC5	99	96.063	ENSMLUG00000008244	PABPC5	99	96.063	Myotis_lucifugus
ENSRBIG00000011760	PABPC5	95	96.313	ENSNGAG00000004371	Pabpc5	99	96.313	Nannospalax_galili
ENSRBIG00000011760	PABPC5	100	99.738	ENSNLEG00000035086	PABPC5	100	99.738	Nomascus_leucogenys
ENSRBIG00000011760	PABPC5	98	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSRBIG00000011760	PABPC5	99	97.638	ENSOCUG00000010919	PABPC5	99	97.638	Oryctolagus_cuniculus
ENSRBIG00000011760	PABPC5	99	96.850	ENSOGAG00000006882	PABPC5	99	96.850	Otolemur_garnettii
ENSRBIG00000011760	PABPC5	99	96.850	ENSOARG00000010260	PABPC5	99	96.850	Ovis_aries
ENSRBIG00000011760	PABPC5	100	99.476	ENSPPAG00000007378	PABPC5	100	99.476	Pan_paniscus
ENSRBIG00000011760	PABPC5	99	97.113	ENSPPRG00000010742	PABPC5	99	97.113	Panthera_pardus
ENSRBIG00000011760	PABPC5	99	97.113	ENSPTIG00000001480	PABPC5	99	97.113	Panthera_tigris_altaica
ENSRBIG00000011760	PABPC5	100	99.738	ENSPTRG00000022078	PABPC5	100	99.738	Pan_troglodytes
ENSRBIG00000011760	PABPC5	100	100.000	ENSPANG00000018282	PABPC5	100	100.000	Papio_anubis
ENSRBIG00000011760	PABPC5	99	95.276	ENSPEMG00000000171	Pabpc5	99	95.276	Peromyscus_maniculatus_bairdii
ENSRBIG00000011760	PABPC5	100	99.738	ENSPPYG00000020526	PABPC5	100	99.738	Pongo_abelii
ENSRBIG00000011760	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSRBIG00000011760	PABPC5	99	97.113	ENSPCOG00000000676	PABPC5	99	97.113	Propithecus_coquereli
ENSRBIG00000011760	PABPC5	99	97.113	ENSPVAG00000006465	PABPC5	99	97.113	Pteropus_vampyrus
ENSRBIG00000011760	PABPC5	99	95.801	ENSRNOG00000003354	Pabpc5	99	95.801	Rattus_norvegicus
ENSRBIG00000011760	PABPC5	100	100.000	ENSRROG00000036708	PABPC5	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000011760	PABPC5	100	99.476	ENSSBOG00000008658	PABPC5	100	99.476	Saimiri_boliviensis_boliviensis
ENSRBIG00000011760	PABPC5	99	94.488	ENSSARG00000014012	PABPC5	99	94.488	Sorex_araneus
ENSRBIG00000011760	PABPC5	99	97.113	ENSSSCG00000040194	PABPC5	99	97.113	Sus_scrofa
ENSRBIG00000011760	PABPC5	99	98.425	ENSTBEG00000016482	PABPC5	99	98.425	Tupaia_belangeri
ENSRBIG00000011760	PABPC5	99	96.850	ENSUAMG00000013627	PABPC5	99	96.850	Ursus_americanus
ENSRBIG00000011760	PABPC5	99	96.588	ENSUMAG00000023934	PABPC5	99	96.588	Ursus_maritimus
ENSRBIG00000011760	PABPC5	99	97.113	ENSVPAG00000001063	PABPC5	99	97.113	Vicugna_pacos
ENSRBIG00000011760	PABPC5	99	97.113	ENSVVUG00000013172	PABPC5	99	97.113	Vulpes_vulpes