EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000012281 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 122284 bases
Position: chrMCGX01001313.1:3747388-3869671
Accession: 108525645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000002538	UvrD-helicase	PF00580.21	7.3e-05	1	1
ENSRBIP00000002530	UvrD-helicase	PF00580.21	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000013514	TRANK1-201	10915	XM_017866557	ENSRBIP00000002530	3088 (aa)	XP_017722046	A0A2K6JU31
ENSRBIT00000013530	TRANK1-202	8781	XM_017866561	ENSRBIP00000002538	2926 (aa)	XP_017722050	A0A2K6JU48

Gene Model

Click here to download ENSRBIG00000012281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000012281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000012281	TRANK1	84	58.343	ENSAPLG00000010356	TRANK1	99	58.303	Anas_platyrhynchos
ENSRBIG00000012281	TRANK1	54	86.554	ENSCAFG00020001387	TRANK1	99	86.306	Canis_lupus_dingo
ENSRBIG00000012281	TRANK1	99	87.445	ENSTSYG00000025860	TRANK1	99	87.688	Carlito_syrichta
ENSRBIG00000012281	TRANK1	99	82.481	ENSCLAG00000003643	TRANK1	99	83.635	Chinchilla_lanigera
ENSRBIG00000012281	TRANK1	98	65.611	ENSCPBG00000013529	TRANK1	100	65.491	Chrysemys_picta_bellii
ENSRBIG00000012281	TRANK1	99	99.452	ENSCANG00000039915	TRANK1	99	99.452	Colobus_angolensis_palliatus
ENSRBIG00000012281	TRANK1	98	84.148	ENSDNOG00000003573	TRANK1	99	84.147	Dasypus_novemcinctus
ENSRBIG00000012281	TRANK1	99	85.106	ENSEASG00005007374	TRANK1	100	86.697	Equus_asinus_asinus
ENSRBIG00000012281	TRANK1	99	85.617	ENSECAG00000018264	TRANK1	100	85.466	Equus_caballus
ENSRBIG00000012281	TRANK1	82	82.022	ENSEEUG00000008528	TRANK1	99	82.007	Erinaceus_europaeus
ENSRBIG00000012281	TRANK1	99	57.506	ENSFALG00000002875	TRANK1	99	57.361	Ficedula_albicollis
ENSRBIG00000012281	TRANK1	73	62.088	ENSGALG00000037629	TRANK1	100	61.655	Gallus_gallus
ENSRBIG00000012281	TRANK1	91	63.333	ENSGAGG00000009012	TRANK1	100	63.311	Gopherus_agassizii
ENSRBIG00000012281	TRANK1	99	47.472	ENSLOCG00000004808	TRANK1	100	47.243	Lepisosteus_oculatus
ENSRBIG00000012281	TRANK1	99	58.088	ENSMGAG00000011934	TRANK1	99	57.877	Meleagris_gallopavo
ENSRBIG00000012281	TRANK1	99	84.600	ENSMLUG00000003537	TRANK1	99	84.915	Myotis_lucifugus
ENSRBIG00000012281	TRANK1	99	82.503	ENSODEG00000003882	TRANK1	97	83.470	Octodon_degus
ENSRBIG00000012281	TRANK1	99	62.542	ENSPSIG00000010217	TRANK1	100	62.554	Pelodiscus_sinensis
ENSRBIG00000012281	TRANK1	66	73.756	ENSPCAG00000002172	-	87	73.499	Procavia_capensis
ENSRBIG00000012281	TRANK1	81	78.327	ENSPVAG00000004199	TRANK1	100	78.235	Pteropus_vampyrus
ENSRBIG00000012281	TRANK1	100	99.897	ENSRROG00000044487	TRANK1	100	99.897	Rhinopithecus_roxellana
ENSRBIG00000012281	TRANK1	60	88.889	ENSSARG00000007861	-	74	88.889	Sorex_araneus
ENSRBIG00000012281	TRANK1	73	67.204	ENSSPUG00000015974	TRANK1	93	77.160	Sphenodon_punctatus
ENSRBIG00000012281	TRANK1	84	59.328	ENSTGUG00000005694	TRANK1	100	59.328	Taeniopygia_guttata
ENSRBIG00000012281	TRANK1	54	87.123	ENSUAMG00000027609	-	99	87.042	Ursus_americanus
ENSRBIG00000012281	TRANK1	54	86.562	ENSUMAG00000006416	TRANK1	99	86.495	Ursus_maritimus
ENSRBIG00000012281	TRANK1	54	86.304	ENSVVUG00000007788	TRANK1	99	86.062	Vulpes_vulpes