EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000014222 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 100940 bases
Position: chrMCGX01005941.1:7359690-7460629
Accession: 108538830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000003046	Ago_hook	PF10427.9	3.3e-19	1	1
ENSRBIP00000003031	Ago_hook	PF10427.9	5.2e-19	1	1
ENSRBIP00000003026	Ago_hook	PF10427.9	7.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000015755	TNRC6A-201	8681	XM_017887114	ENSRBIP00000003026	1931 (aa)	XP_017742603	A0A2K6JVI0
ENSRBIT00000015799	TNRC6A-202	8534	XM_017887118	ENSRBIP00000003031	1882 (aa)	XP_017742607	A0A2K6JVI4
ENSRBIT00000015895	TNRC6A-203	5856	-	ENSRBIP00000003046	1951 (aa)	-	A0A2K6JVJ9

Gene Model

Click here to download ENSRBIG00000014222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000014222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000014222	TNRC6A	98	40.426	ENSRBIG00000035576	TNRC6B	92	43.478
ENSRBIG00000014222	TNRC6A	98	49.704	ENSRBIG00000027777	TNRC6C	98	44.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000014222	TNRC6A	100	99.018	ENSG00000090905	TNRC6A	99	99.018	Homo_sapiens
ENSRBIG00000014222	TNRC6A	99	96.606	ENSAMEG00000009333	TNRC6A	100	96.606	Ailuropoda_melanoleuca
ENSRBIG00000014222	TNRC6A	99	81.942	ENSAPLG00000009978	TNRC6A	100	81.942	Anas_platyrhynchos
ENSRBIG00000014222	TNRC6A	99	54.181	ENSACAG00000011857	TNRC6A	97	56.128	Anolis_carolinensis
ENSRBIG00000014222	TNRC6A	100	98.964	ENSANAG00000025252	TNRC6A	99	98.964	Aotus_nancymaae
ENSRBIG00000014222	TNRC6A	92	56.928	ENSAMXG00000019919	tnrc6a	99	56.876	Astyanax_mexicanus
ENSRBIG00000014222	TNRC6A	99	95.431	ENSBTAG00000017999	TNRC6A	99	95.011	Bos_taurus
ENSRBIG00000014222	TNRC6A	100	98.660	ENSCJAG00000020677	TNRC6A	99	98.660	Callithrix_jacchus
ENSRBIG00000014222	TNRC6A	100	96.739	ENSCAFG00000017531	TNRC6A	100	96.654	Canis_familiaris
ENSRBIG00000014222	TNRC6A	99	94.948	ENSCAFG00020021160	TNRC6A	99	95.438	Canis_lupus_dingo
ENSRBIG00000014222	TNRC6A	99	94.895	ENSCHIG00000019448	TNRC6A	99	94.343	Capra_hircus
ENSRBIG00000014222	TNRC6A	100	96.789	ENSTSYG00000012711	TNRC6A	99	96.789	Carlito_syrichta
ENSRBIG00000014222	TNRC6A	100	96.227	ENSCPOG00000036684	TNRC6A	99	96.227	Cavia_porcellus
ENSRBIG00000014222	TNRC6A	100	99.172	ENSCCAG00000033664	TNRC6A	99	99.172	Cebus_capucinus
ENSRBIG00000014222	TNRC6A	100	99.155	ENSCATG00000019284	TNRC6A	99	99.155	Cercocebus_atys
ENSRBIG00000014222	TNRC6A	99	91.725	ENSCLAG00000010217	TNRC6A	97	91.725	Chinchilla_lanigera
ENSRBIG00000014222	TNRC6A	100	99.586	ENSCSAG00000006561	TNRC6A	99	99.586	Chlorocebus_sabaeus
ENSRBIG00000014222	TNRC6A	94	91.763	ENSCHOG00000009374	TNRC6A	92	91.763	Choloepus_hoffmanni
ENSRBIG00000014222	TNRC6A	92	82.275	ENSCPBG00000001881	TNRC6A	99	82.275	Chrysemys_picta_bellii
ENSRBIG00000014222	TNRC6A	100	99.586	ENSCANG00000041549	TNRC6A	99	99.586	Colobus_angolensis_palliatus
ENSRBIG00000014222	TNRC6A	99	94.718	ENSCGRG00001015021	Tnrc6a	99	94.662	Cricetulus_griseus_chok1gshd
ENSRBIG00000014222	TNRC6A	99	94.073	ENSCGRG00000013351	Tnrc6a	97	93.750	Cricetulus_griseus_crigri
ENSRBIG00000014222	TNRC6A	92	56.870	ENSDARG00000079688	tnrc6a	99	56.902	Danio_rerio
ENSRBIG00000014222	TNRC6A	99	93.890	ENSDNOG00000013989	TNRC6A	99	93.838	Dasypus_novemcinctus
ENSRBIG00000014222	TNRC6A	99	85.550	ENSETEG00000014658	TNRC6A	99	85.497	Echinops_telfairi
ENSRBIG00000014222	TNRC6A	100	96.532	ENSEASG00005017693	TNRC6A	99	96.532	Equus_asinus_asinus
ENSRBIG00000014222	TNRC6A	100	96.532	ENSECAG00000025056	TNRC6A	100	96.532	Equus_caballus
ENSRBIG00000014222	TNRC6A	99	89.452	ENSEEUG00000004530	TNRC6A	99	89.452	Erinaceus_europaeus
ENSRBIG00000014222	TNRC6A	99	95.497	ENSFCAG00000025236	TNRC6A	99	95.445	Felis_catus
ENSRBIG00000014222	TNRC6A	99	79.339	ENSFALG00000003757	TNRC6A	97	79.742	Ficedula_albicollis
ENSRBIG00000014222	TNRC6A	92	82.305	ENSGALG00000006068	TNRC6A	99	82.709	Gallus_gallus
ENSRBIG00000014222	TNRC6A	92	81.484	ENSGAGG00000023209	TNRC6A	99	81.771	Gopherus_agassizii
ENSRBIG00000014222	TNRC6A	100	98.812	ENSGGOG00000005137	TNRC6A	99	98.812	Gorilla_gorilla
ENSRBIG00000014222	TNRC6A	95	75.195	ENSHGLG00000007368	-	93	74.818	Heterocephalus_glaber_female
ENSRBIG00000014222	TNRC6A	98	94.598	ENSHGLG00000012474	-	97	94.543	Heterocephalus_glaber_female
ENSRBIG00000014222	TNRC6A	98	93.990	ENSHGLG00100012496	-	97	93.936	Heterocephalus_glaber_male
ENSRBIG00000014222	TNRC6A	100	96.027	ENSSTOG00000023394	TNRC6A	97	96.027	Ictidomys_tridecemlineatus
ENSRBIG00000014222	TNRC6A	99	69.628	ENSLACG00000006277	TNRC6A	100	70.300	Latimeria_chalumnae
ENSRBIG00000014222	TNRC6A	100	83.002	ENSLOCG00000005517	tnrc6a	90	83.002	Lepisosteus_oculatus
ENSRBIG00000014222	TNRC6A	99	94.740	ENSLAFG00000004209	TNRC6A	99	94.844	Loxodonta_africana
ENSRBIG00000014222	TNRC6A	99	99.070	ENSMFAG00000003824	TNRC6A	100	99.070	Macaca_fascicularis
ENSRBIG00000014222	TNRC6A	100	99.275	ENSMMUG00000020428	TNRC6A	99	99.275	Macaca_mulatta
ENSRBIG00000014222	TNRC6A	100	99.073	ENSMNEG00000034854	TNRC6A	100	99.070	Macaca_nemestrina
ENSRBIG00000014222	TNRC6A	100	96.707	ENSMLEG00000042737	TNRC6A	99	96.707	Mandrillus_leucophaeus
ENSRBIG00000014222	TNRC6A	99	80.301	ENSMGAG00000006455	TNRC6A	93	82.432	Meleagris_gallopavo
ENSRBIG00000014222	TNRC6A	99	94.468	ENSMAUG00000012750	Tnrc6a	97	94.468	Mesocricetus_auratus
ENSRBIG00000014222	TNRC6A	100	97.778	ENSMICG00000030685	TNRC6A	99	97.778	Microcebus_murinus
ENSRBIG00000014222	TNRC6A	99	94.895	ENSMOCG00000000152	Tnrc6a	97	94.627	Microtus_ochrogaster
ENSRBIG00000014222	TNRC6A	99	81.962	ENSMODG00000016348	TNRC6A	96	82.269	Monodelphis_domestica
ENSRBIG00000014222	TNRC6A	99	93.176	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.711	Mus_caroli
ENSRBIG00000014222	TNRC6A	99	93.713	ENSMUSG00000052707	Tnrc6a	99	95.068	Mus_musculus
ENSRBIG00000014222	TNRC6A	99	93.985	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.354	Mus_pahari
ENSRBIG00000014222	TNRC6A	99	93.927	MGP_SPRETEiJ_G0031539	Tnrc6a	100	95.211	Mus_spretus
ENSRBIG00000014222	TNRC6A	99	84.409	ENSMPUG00000012324	TNRC6A	100	84.355	Mustela_putorius_furo
ENSRBIG00000014222	TNRC6A	99	93.015	ENSMLUG00000002701	TNRC6A	100	92.962	Myotis_lucifugus
ENSRBIG00000014222	TNRC6A	99	95.650	ENSNGAG00000020702	Tnrc6a	98	95.596	Nannospalax_galili
ENSRBIG00000014222	TNRC6A	99	96.594	ENSNLEG00000011851	TNRC6A	99	96.594	Nomascus_leucogenys
ENSRBIG00000014222	TNRC6A	76	89.258	ENSMEUG00000015959	-	74	89.258	Notamacropus_eugenii
ENSRBIG00000014222	TNRC6A	95	99.627	ENSOPRG00000005819	TNRC6A	93	99.627	Ochotona_princeps
ENSRBIG00000014222	TNRC6A	98	90.286	ENSODEG00000012802	TNRC6A	97	90.070	Octodon_degus
ENSRBIG00000014222	TNRC6A	89	83.256	ENSOANG00000007672	TNRC6A	99	83.256	Ornithorhynchus_anatinus
ENSRBIG00000014222	TNRC6A	99	93.228	ENSOCUG00000004325	TNRC6A	100	93.176	Oryctolagus_cuniculus
ENSRBIG00000014222	TNRC6A	100	97.206	ENSOGAG00000006666	TNRC6A	99	97.206	Otolemur_garnettii
ENSRBIG00000014222	TNRC6A	99	94.108	ENSOARG00000017950	TNRC6A	98	95.457	Ovis_aries
ENSRBIG00000014222	TNRC6A	100	98.763	ENSPPAG00000028379	TNRC6A	99	98.763	Pan_paniscus
ENSRBIG00000014222	TNRC6A	99	95.497	ENSPPRG00000005861	TNRC6A	98	95.445	Panthera_pardus
ENSRBIG00000014222	TNRC6A	99	94.360	ENSPTIG00000006346	TNRC6A	98	94.360	Panthera_tigris_altaica
ENSRBIG00000014222	TNRC6A	99	98.542	ENSPTRG00000007898	TNRC6A	99	98.542	Pan_troglodytes
ENSRBIG00000014222	TNRC6A	100	97.059	ENSPANG00000018523	TNRC6A	99	97.248	Papio_anubis
ENSRBIG00000014222	TNRC6A	89	75.862	ENSPKIG00000012859	tnrc6a	96	78.919	Paramormyrops_kingsleyae
ENSRBIG00000014222	TNRC6A	78	77.703	ENSPSIG00000003965	TNRC6A	100	77.703	Pelodiscus_sinensis
ENSRBIG00000014222	TNRC6A	99	94.734	ENSPEMG00000016318	Tnrc6a	98	94.465	Peromyscus_maniculatus_bairdii
ENSRBIG00000014222	TNRC6A	99	83.673	ENSPCIG00000012106	TNRC6A	100	83.883	Phascolarctos_cinereus
ENSRBIG00000014222	TNRC6A	100	98.504	ENSPPYG00000007202	TNRC6A	99	98.504	Pongo_abelii
ENSRBIG00000014222	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	92	100.000	Procavia_capensis
ENSRBIG00000014222	TNRC6A	100	95.398	ENSPCOG00000010134	TNRC6A	99	95.398	Propithecus_coquereli
ENSRBIG00000014222	TNRC6A	89	71.204	ENSPVAG00000012066	TNRC6A	97	71.412	Pteropus_vampyrus
ENSRBIG00000014222	TNRC6A	99	93.847	ENSRNOG00000024737	Tnrc6a	98	93.881	Rattus_norvegicus
ENSRBIG00000014222	TNRC6A	100	99.744	ENSRROG00000032360	TNRC6A	99	99.744	Rhinopithecus_roxellana
ENSRBIG00000014222	TNRC6A	99	98.116	ENSSBOG00000036197	TNRC6A	100	99.473	Saimiri_boliviensis_boliviensis
ENSRBIG00000014222	TNRC6A	92	83.704	ENSSHAG00000008811	TNRC6A	99	84.160	Sarcophilus_harrisii
ENSRBIG00000014222	TNRC6A	88	67.216	ENSSFOG00015008920	tnrc6a	99	63.759	Scleropages_formosus
ENSRBIG00000014222	TNRC6A	73	84.058	ENSSARG00000002479	TNRC6A	89	83.333	Sorex_araneus
ENSRBIG00000014222	TNRC6A	91	78.779	ENSSPUG00000010525	TNRC6A	100	78.779	Sphenodon_punctatus
ENSRBIG00000014222	TNRC6A	100	96.188	ENSSSCG00000038870	TNRC6A	100	97.776	Sus_scrofa
ENSRBIG00000014222	TNRC6A	99	80.150	ENSTGUG00000006142	TNRC6A	97	80.150	Taeniopygia_guttata
ENSRBIG00000014222	TNRC6A	99	94.517	ENSTBEG00000014965	TNRC6A	100	94.517	Tupaia_belangeri
ENSRBIG00000014222	TNRC6A	93	98.058	ENSTTRG00000002008	TNRC6A	90	98.058	Tursiops_truncatus
ENSRBIG00000014222	TNRC6A	80	95.875	ENSUAMG00000006656	-	93	95.875	Ursus_americanus
ENSRBIG00000014222	TNRC6A	99	96.429	ENSUMAG00000008274	TNRC6A	100	97.590	Ursus_maritimus
ENSRBIG00000014222	TNRC6A	52	97.273	ENSVPAG00000010764	-	52	97.273	Vicugna_pacos
ENSRBIG00000014222	TNRC6A	100	96.739	ENSVVUG00000005380	TNRC6A	100	96.739	Vulpes_vulpes
ENSRBIG00000014222	TNRC6A	95	65.667	ENSXETG00000030437	TNRC6A	99	66.073	Xenopus_tropicalis