EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000017275 (Gene tree)
Gene ID: -
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 24773 bases
Position: chrMCGX01005251.1:455203-479975
Accession: 108537763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000003624	zf-C2H2	PF00096.26	5.5e-37	1	6
ENSRBIP00000003624	zf-C2H2	PF00096.26	5.5e-37	2	6
ENSRBIP00000003624	zf-C2H2	PF00096.26	5.5e-37	3	6
ENSRBIP00000003624	zf-C2H2	PF00096.26	5.5e-37	4	6
ENSRBIP00000003624	zf-C2H2	PF00096.26	5.5e-37	5	6
ENSRBIP00000003624	zf-C2H2	PF00096.26	5.5e-37	6	6
ENSRBIP00000003607	zf-C2H2	PF00096.26	1.4e-36	1	6
ENSRBIP00000003607	zf-C2H2	PF00096.26	1.4e-36	2	6
ENSRBIP00000003607	zf-C2H2	PF00096.26	1.4e-36	3	6
ENSRBIP00000003607	zf-C2H2	PF00096.26	1.4e-36	4	6
ENSRBIP00000003607	zf-C2H2	PF00096.26	1.4e-36	5	6
ENSRBIP00000003607	zf-C2H2	PF00096.26	1.4e-36	6	6
ENSRBIP00000003624	zf-met	PF12874.7	0.00017	1	1
ENSRBIP00000003607	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000018863	ZNF550-201	2566	XM_017885455	ENSRBIP00000003607	417 (aa)	XP_017740944	A0A2K6JX67
ENSRBIT00000018924	ZNF550-203	1131	-	ENSRBIP00000003624	376 (aa)	-	A0A2K6JX74
ENSRBIT00000018884	ZNF550-202	378	-	ENSRBIP00000003618	125 (aa)	-	A0A2K6JX72

Gene Model

Click here to download ENSRBIG00000017275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000017275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000017275	ZNF550	98	53.982	ENSRBIG00000035218	ZNF233	98	53.982
ENSRBIG00000017275	ZNF550	99	56.828	ENSRBIG00000015261	ZNF112	99	56.828
ENSRBIG00000017275	ZNF550	99	54.717	ENSRBIG00000043636	ZNF700	99	55.000
ENSRBIG00000017275	ZNF550	99	54.626	ENSRBIG00000026071	ZNF235	99	54.626
ENSRBIG00000017275	ZNF550	99	56.195	ENSRBIG00000036703	ZNF816	97	56.195
ENSRBIG00000017275	ZNF550	99	55.066	ENSRBIG00000037464	ZNF28	99	55.066
ENSRBIG00000017275	ZNF550	100	39.655	ENSRBIG00000044637	ZNF205	74	39.387
ENSRBIG00000017275	ZNF550	99	52.353	ENSRBIG00000027750	ZNF317	90	53.684
ENSRBIG00000017275	ZNF550	99	49.339	ENSRBIG00000033889	ZNF225	98	49.339
ENSRBIG00000017275	ZNF550	99	44.248	ENSRBIG00000034257	ZNF337	98	44.248
ENSRBIG00000017275	ZNF550	82	52.863	ENSRBIG00000041827	ZNF878	86	52.889
ENSRBIG00000017275	ZNF550	99	62.000	ENSRBIG00000027794	ZNF829	92	62.000
ENSRBIG00000017275	ZNF550	99	50.980	ENSRBIG00000040117	ZNF814	99	50.980
ENSRBIG00000017275	ZNF550	99	55.947	ENSRBIG00000041848	ZNF888	99	55.947
ENSRBIG00000017275	ZNF550	99	57.558	ENSRBIG00000011854	ZNF836	97	57.558
ENSRBIG00000017275	ZNF550	60	51.542	ENSRBIG00000042081	ZNF768	64	54.286
ENSRBIG00000017275	ZNF550	99	54.626	ENSRBIG00000035402	-	97	54.626
ENSRBIG00000017275	ZNF550	98	55.702	ENSRBIG00000040720	ZNF226	99	55.702
ENSRBIG00000017275	ZNF550	99	57.709	ENSRBIG00000032168	-	99	57.709
ENSRBIG00000017275	ZNF550	99	55.429	ENSRBIG00000039257	ZFP1	99	55.429
ENSRBIG00000017275	ZNF550	99	56.637	ENSRBIG00000037148	ZNF468	98	56.637
ENSRBIG00000017275	ZNF550	99	53.247	ENSRBIG00000038188	ZNF701	99	53.247
ENSRBIG00000017275	ZNF550	99	61.674	ENSRBIG00000042067	ZNF582	87	61.674
ENSRBIG00000017275	ZNF550	99	55.909	ENSRBIG00000033501	ZFP69B	98	55.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000017275	ZNF550	100	96.325	ENSG00000251369	ZNF550	100	96.325	Homo_sapiens
ENSRBIG00000017275	ZNF550	100	99.041	ENSCATG00000020915	ZNF550	100	99.041	Cercocebus_atys
ENSRBIG00000017275	ZNF550	100	63.446	ENSCLAG00000000250	ZNF550	95	66.142	Chinchilla_lanigera
ENSRBIG00000017275	ZNF550	98	98.039	ENSCSAG00000001629	ZNF550	100	98.039	Chlorocebus_sabaeus
ENSRBIG00000017275	ZNF550	100	98.936	ENSCANG00000033735	ZNF550	100	98.936	Colobus_angolensis_palliatus
ENSRBIG00000017275	ZNF550	89	71.848	ENSDNOG00000033330	-	99	70.391	Dasypus_novemcinctus
ENSRBIG00000017275	ZNF550	99	68.766	ENSFCAG00000034766	ZNF550	99	68.766	Felis_catus
ENSRBIG00000017275	ZNF550	100	95.801	ENSGGOG00000014068	ZNF550	100	95.801	Gorilla_gorilla
ENSRBIG00000017275	ZNF550	100	71.599	ENSHGLG00000018048	ZNF550	100	71.599	Heterocephalus_glaber_female
ENSRBIG00000017275	ZNF550	100	98.561	ENSMFAG00000036005	ZNF550	100	98.561	Macaca_fascicularis
ENSRBIG00000017275	ZNF550	100	98.138	ENSMMUG00000006122	ZNF550	100	98.138	Macaca_mulatta
ENSRBIG00000017275	ZNF550	100	98.561	ENSMNEG00000041366	ZNF550	100	98.561	Macaca_nemestrina
ENSRBIG00000017275	ZNF550	100	98.801	ENSMLEG00000034688	ZNF550	100	98.801	Mandrillus_leucophaeus
ENSRBIG00000017275	ZNF550	100	83.508	ENSMICG00000007561	ZNF550	100	83.508	Microcebus_murinus
ENSRBIG00000017275	ZNF550	99	68.504	ENSPPRG00000013475	ZNF550	99	68.504	Panthera_pardus
ENSRBIG00000017275	ZNF550	100	67.550	ENSPTIG00000018007	ZNF550	80	67.365	Panthera_tigris_altaica
ENSRBIG00000017275	ZNF550	100	95.801	ENSPTRG00000011560	ZNF550	100	95.801	Pan_troglodytes
ENSRBIG00000017275	ZNF550	100	98.138	ENSPANG00000030602	ZNF550	100	98.138	Papio_anubis
ENSRBIG00000017275	ZNF550	100	85.864	ENSPCOG00000018751	ZNF550	100	85.864	Propithecus_coquereli
ENSRBIG00000017275	ZNF550	99	71.875	ENSPVAG00000000908	ZNF550	100	72.115	Pteropus_vampyrus
ENSRBIG00000017275	ZNF550	100	100.000	ENSRROG00000040063	ZNF550	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000017275	ZNF550	98	78.986	ENSTTRG00000000293	ZNF550	100	78.986	Tursiops_truncatus