EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000019547 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 10060 bases
Position: chrMCGX01006948.1:855161-865220
Accession: 108541024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000004190	Gar1	PF04410.14	1.1e-38	1	1
ENSRBIP00000004195	Gar1	PF04410.14	1.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000021388	GAR1-201	3724	-	ENSRBIP00000004190	198 (aa)	-	A0A2K6JYU9
ENSRBIT00000021398	GAR1-202	654	XM_017890426	ENSRBIP00000004195	217 (aa)	XP_017745915	A0A2K6JYV3

Gene Model

Click here to download ENSRBIG00000019547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000019547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000019547	GAR1	57	82.143	ENSRBIG00000042411	-	52	81.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000019547	GAR1	100	99.078	ENSG00000109534	GAR1	100	99.078	Homo_sapiens
ENSRBIG00000019547	GAR1	54	94.393	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSRBIG00000019547	GAR1	55	98.165	ENSAMEG00000004605	GAR1	52	98.131	Ailuropoda_melanoleuca
ENSRBIG00000019547	GAR1	54	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSRBIG00000019547	GAR1	54	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSRBIG00000019547	GAR1	54	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSRBIG00000019547	GAR1	54	89.623	ENSAPLG00000010926	GAR1	59	89.623	Anas_platyrhynchos
ENSRBIG00000019547	GAR1	54	91.509	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSRBIG00000019547	GAR1	100	98.165	ENSANAG00000021608	GAR1	100	98.165	Aotus_nancymaae
ENSRBIG00000019547	GAR1	55	99.083	ENSBTAG00000000748	GAR1	51	99.065	Bos_taurus
ENSRBIG00000019547	GAR1	100	97.706	ENSCJAG00000004041	GAR1	100	97.706	Callithrix_jacchus
ENSRBIG00000019547	GAR1	54	99.057	ENSCAFG00020015566	GAR1	56	99.065	Canis_lupus_dingo
ENSRBIG00000019547	GAR1	56	99.091	ENSCHIG00000016026	-	51	99.065	Capra_hircus
ENSRBIG00000019547	GAR1	100	94.954	ENSTSYG00000013668	-	50	100.000	Carlito_syrichta
ENSRBIG00000019547	GAR1	55	91.743	ENSTSYG00000026632	-	55	91.589	Carlito_syrichta
ENSRBIG00000019547	GAR1	100	98.165	ENSCCAG00000029372	GAR1	100	98.165	Cebus_capucinus
ENSRBIG00000019547	GAR1	100	99.539	ENSCATG00000021854	GAR1	100	99.539	Cercocebus_atys
ENSRBIG00000019547	GAR1	61	97.521	ENSCLAG00000005335	GAR1	99	94.937	Chinchilla_lanigera
ENSRBIG00000019547	GAR1	100	99.495	ENSCSAG00000003922	GAR1	100	99.495	Chlorocebus_sabaeus
ENSRBIG00000019547	GAR1	56	99.099	ENSCHOG00000007484	-	51	99.138	Choloepus_hoffmanni
ENSRBIG00000019547	GAR1	54	92.453	ENSCPBG00000004310	GAR1	54	92.453	Chrysemys_picta_bellii
ENSRBIG00000019547	GAR1	100	98.618	ENSCANG00000039262	GAR1	100	98.618	Colobus_angolensis_palliatus
ENSRBIG00000019547	GAR1	54	94.393	ENSCVAG00000002103	gar1	51	94.393	Cyprinodon_variegatus
ENSRBIG00000019547	GAR1	54	91.589	ENSDARG00000076526	gar1	67	78.000	Danio_rerio
ENSRBIG00000019547	GAR1	55	99.083	ENSDNOG00000037632	GAR1	54	99.065	Dasypus_novemcinctus
ENSRBIG00000019547	GAR1	69	60.345	FBgn0011824	CG4038	68	60.714	Drosophila_melanogaster
ENSRBIG00000019547	GAR1	56	98.182	ENSEASG00005004658	GAR1	50	98.131	Equus_asinus_asinus
ENSRBIG00000019547	GAR1	56	99.091	ENSECAG00000013624	GAR1	54	99.065	Equus_caballus
ENSRBIG00000019547	GAR1	55	99.083	ENSFCAG00000040791	-	51	99.065	Felis_catus
ENSRBIG00000019547	GAR1	87	53.333	ENSFCAG00000025841	-	78	52.899	Felis_catus
ENSRBIG00000019547	GAR1	54	93.396	ENSFALG00000006445	GAR1	65	80.282	Ficedula_albicollis
ENSRBIG00000019547	GAR1	56	91.892	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSRBIG00000019547	GAR1	53	93.269	ENSGAGG00000004393	GAR1	53	93.269	Gopherus_agassizii
ENSRBIG00000019547	GAR1	56	80.180	ENSGGOG00000036205	-	53	80.374	Gorilla_gorilla
ENSRBIG00000019547	GAR1	100	98.618	ENSGGOG00000008681	GAR1	100	98.618	Gorilla_gorilla
ENSRBIG00000019547	GAR1	54	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSRBIG00000019547	GAR1	56	90.000	ENSIPUG00000003194	gar1	51	91.589	Ictalurus_punctatus
ENSRBIG00000019547	GAR1	55	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSRBIG00000019547	GAR1	56	89.189	ENSKMAG00000010402	gar1	51	91.589	Kryptolebias_marmoratus
ENSRBIG00000019547	GAR1	80	84.298	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSRBIG00000019547	GAR1	55	84.259	ENSMFAG00000003572	-	52	84.112	Macaca_fascicularis
ENSRBIG00000019547	GAR1	100	99.539	ENSMFAG00000024592	GAR1	100	99.539	Macaca_fascicularis
ENSRBIG00000019547	GAR1	100	99.539	ENSMMUG00000021225	GAR1	100	99.539	Macaca_mulatta
ENSRBIG00000019547	GAR1	100	99.539	ENSMNEG00000042594	GAR1	100	99.539	Macaca_nemestrina
ENSRBIG00000019547	GAR1	99	99.070	ENSMLEG00000002496	GAR1	99	99.070	Mandrillus_leucophaeus
ENSRBIG00000019547	GAR1	55	96.330	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSRBIG00000019547	GAR1	55	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSRBIG00000019547	GAR1	54	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSRBIG00000019547	GAR1	75	74.497	ENSMALG00000009672	gar1	52	92.035	Monopterus_albus
ENSRBIG00000019547	GAR1	55	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSRBIG00000019547	GAR1	56	96.364	ENSMUSG00000028010	Gar1	90	82.123	Mus_musculus
ENSRBIG00000019547	GAR1	56	98.182	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSRBIG00000019547	GAR1	56	96.364	MGP_SPRETEiJ_G0026580	Gar1	90	82.123	Mus_spretus
ENSRBIG00000019547	GAR1	55	99.083	ENSMPUG00000008615	GAR1	51	99.065	Mustela_putorius_furo
ENSRBIG00000019547	GAR1	100	93.304	ENSMLUG00000003776	GAR1	100	93.304	Myotis_lucifugus
ENSRBIG00000019547	GAR1	56	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSRBIG00000019547	GAR1	100	97.235	ENSNLEG00000016578	GAR1	100	97.235	Nomascus_leucogenys
ENSRBIG00000019547	GAR1	56	83.784	ENSNLEG00000034282	-	54	83.178	Nomascus_leucogenys
ENSRBIG00000019547	GAR1	54	98.131	ENSODEG00000011083	GAR1	55	98.131	Octodon_degus
ENSRBIG00000019547	GAR1	100	95.000	ENSOCUG00000003901	GAR1	100	95.000	Oryctolagus_cuniculus
ENSRBIG00000019547	GAR1	100	94.977	ENSOGAG00000004693	GAR1	50	99.065	Otolemur_garnettii
ENSRBIG00000019547	GAR1	55	99.083	ENSOARG00000004910	GAR1	51	99.065	Ovis_aries
ENSRBIG00000019547	GAR1	100	98.624	ENSPPAG00000014081	GAR1	100	98.624	Pan_paniscus
ENSRBIG00000019547	GAR1	55	99.083	ENSPPRG00000023697	GAR1	51	99.065	Panthera_pardus
ENSRBIG00000019547	GAR1	55	99.083	ENSPTIG00000021565	GAR1	51	99.065	Panthera_tigris_altaica
ENSRBIG00000019547	GAR1	100	98.618	ENSPTRG00000016364	GAR1	100	98.618	Pan_troglodytes
ENSRBIG00000019547	GAR1	88	81.651	ENSPTRG00000049340	-	66	73.723	Pan_troglodytes
ENSRBIG00000019547	GAR1	100	98.618	ENSPANG00000000639	GAR1	100	98.618	Papio_anubis
ENSRBIG00000019547	GAR1	84	73.653	ENSPKIG00000018991	gar1	65	86.111	Paramormyrops_kingsleyae
ENSRBIG00000019547	GAR1	55	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSRBIG00000019547	GAR1	55	92.593	ENSPCIG00000018912	GAR1	51	88.430	Phascolarctos_cinereus
ENSRBIG00000019547	GAR1	54	93.458	ENSPFOG00000024155	gar1	51	93.458	Poecilia_formosa
ENSRBIG00000019547	GAR1	54	93.458	ENSPLAG00000015056	gar1	51	93.458	Poecilia_latipinna
ENSRBIG00000019547	GAR1	54	94.393	ENSPMEG00000009320	gar1	51	94.393	Poecilia_mexicana
ENSRBIG00000019547	GAR1	100	98.618	ENSPPYG00000014996	GAR1	100	98.618	Pongo_abelii
ENSRBIG00000019547	GAR1	54	100.000	ENSPCOG00000027049	GAR1	55	100.000	Propithecus_coquereli
ENSRBIG00000019547	GAR1	85	95.322	ENSRNOG00000061146	Gar1	100	95.322	Rattus_norvegicus
ENSRBIG00000019547	GAR1	100	99.539	ENSRROG00000028454	GAR1	100	99.539	Rhinopithecus_roxellana
ENSRBIG00000019547	GAR1	57	82.143	ENSRROG00000044348	-	51	81.308	Rhinopithecus_roxellana
ENSRBIG00000019547	GAR1	61	52.846	YHR089C	-	78	48.092	Saccharomyces_cerevisiae
ENSRBIG00000019547	GAR1	97	95.897	ENSSBOG00000024785	GAR1	90	95.897	Saimiri_boliviensis_boliviensis
ENSRBIG00000019547	GAR1	54	91.589	ENSSMAG00000009976	gar1	52	90.265	Scophthalmus_maximus
ENSRBIG00000019547	GAR1	54	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSRBIG00000019547	GAR1	54	93.396	ENSSPUG00000008707	GAR1	59	93.396	Sphenodon_punctatus
ENSRBIG00000019547	GAR1	54	94.393	ENSSPAG00000005974	gar1	53	93.388	Stegastes_partitus
ENSRBIG00000019547	GAR1	56	99.091	ENSSSCG00000009137	GAR1	53	99.065	Sus_scrofa
ENSRBIG00000019547	GAR1	50	89.899	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSRBIG00000019547	GAR1	54	90.654	ENSTRUG00000020580	gar1	51	90.654	Takifugu_rubripes
ENSRBIG00000019547	GAR1	53	93.269	ENSTNIG00000013023	gar1	61	93.458	Tetraodon_nigroviridis
ENSRBIG00000019547	GAR1	54	99.057	ENSUAMG00000005652	GAR1	56	99.065	Ursus_americanus
ENSRBIG00000019547	GAR1	55	99.083	ENSUMAG00000000776	GAR1	52	99.065	Ursus_maritimus
ENSRBIG00000019547	GAR1	55	99.083	ENSVVUG00000017612	GAR1	55	99.065	Vulpes_vulpes