EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000024746 (Gene tree)
Gene ID: -
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 265269 bases
Position: chrMCGX01000313.1:1884311-2149579
Accession: 108526270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000005670	EST1	PF10374.9	5.3e-15	1	1
ENSRBIP00000005670	EST1_DNA_bind	PF10373.9	1.6e-60	1	1
ENSRBIP00000005670	PIN_4	PF13638.6	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000027328	SMG6-201	5924	XM_017866931	ENSRBIP00000005670	1419 (aa)	XP_017722420	A0A2K6K317

Gene Model

Click here to download ENSRBIG00000024746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000024746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000024746	SMG6	100	96.899	ENSG00000070366	SMG6	100	98.826	Homo_sapiens
ENSRBIG00000024746	SMG6	83	54.894	ENSAPOG00000019448	smg6	74	55.070	Acanthochromis_polyacanthus
ENSRBIG00000024746	SMG6	100	93.164	ENSAMEG00000007632	SMG6	100	93.164	Ailuropoda_melanoleuca
ENSRBIG00000024746	SMG6	71	59.670	ENSAOCG00000002630	smg6	74	55.234	Amphiprion_ocellaris
ENSRBIG00000024746	SMG6	71	59.762	ENSAPEG00000019101	smg6	74	55.391	Amphiprion_percula
ENSRBIG00000024746	SMG6	86	54.470	ENSATEG00000006483	smg6	75	54.107	Anabas_testudineus
ENSRBIG00000024746	SMG6	87	57.402	ENSACAG00000011783	SMG6	99	58.077	Anolis_carolinensis
ENSRBIG00000024746	SMG6	100	96.054	ENSANAG00000035760	SMG6	100	96.054	Aotus_nancymaae
ENSRBIG00000024746	SMG6	71	59.355	ENSACLG00000005288	smg6	86	53.406	Astatotilapia_calliptera
ENSRBIG00000024746	SMG6	73	61.349	ENSAMXG00000017326	smg6	99	50.933	Astyanax_mexicanus
ENSRBIG00000024746	SMG6	100	92.741	ENSBTAG00000000267	SMG6	100	92.741	Bos_taurus
ENSRBIG00000024746	SMG6	100	95.490	ENSCJAG00000001820	SMG6	100	95.490	Callithrix_jacchus
ENSRBIG00000024746	SMG6	100	93.376	ENSCAFG00000019260	SMG6	100	93.376	Canis_familiaris
ENSRBIG00000024746	SMG6	100	93.376	ENSCAFG00020009770	SMG6	100	93.376	Canis_lupus_dingo
ENSRBIG00000024746	SMG6	100	92.600	ENSCHIG00000021998	SMG6	100	92.600	Capra_hircus
ENSRBIG00000024746	SMG6	100	93.658	ENSTSYG00000003406	SMG6	100	96.673	Carlito_syrichta
ENSRBIG00000024746	SMG6	98	77.338	ENSCAPG00000016197	SMG6	99	82.201	Cavia_aperea
ENSRBIG00000024746	SMG6	100	90.845	ENSCPOG00000014878	SMG6	100	90.845	Cavia_porcellus
ENSRBIG00000024746	SMG6	100	95.983	ENSCCAG00000035801	SMG6	100	95.983	Cebus_capucinus
ENSRBIG00000024746	SMG6	100	98.238	ENSCATG00000031956	SMG6	100	98.238	Cercocebus_atys
ENSRBIG00000024746	SMG6	100	92.389	ENSCLAG00000006748	SMG6	100	92.389	Chinchilla_lanigera
ENSRBIG00000024746	SMG6	100	98.661	ENSCSAG00000013800	SMG6	100	98.661	Chlorocebus_sabaeus
ENSRBIG00000024746	SMG6	57	98.507	ENSCHOG00000005024	-	73	98.507	Choloepus_hoffmanni
ENSRBIG00000024746	SMG6	100	71.933	ENSCPBG00000020369	SMG6	100	72.488	Chrysemys_picta_bellii
ENSRBIG00000024746	SMG6	98	98.992	ENSCANG00000031764	SMG6	100	99.609	Colobus_angolensis_palliatus
ENSRBIG00000024746	SMG6	55	88.107	ENSCGRG00001019595	Smg6	98	88.107	Cricetulus_griseus_chok1gshd
ENSRBIG00000024746	SMG6	98	84.870	ENSCGRG00000007782	Smg6	100	85.014	Cricetulus_griseus_crigri
ENSRBIG00000024746	SMG6	87	53.544	ENSCSEG00000012757	smg6	82	53.434	Cynoglossus_semilaevis
ENSRBIG00000024746	SMG6	74	57.180	ENSCVAG00000012789	smg6	74	53.774	Cyprinodon_variegatus
ENSRBIG00000024746	SMG6	97	55.990	ENSDARG00000100481	smg6	91	56.511	Danio_rerio
ENSRBIG00000024746	SMG6	100	92.812	ENSDNOG00000048283	SMG6	100	92.812	Dasypus_novemcinctus
ENSRBIG00000024746	SMG6	100	88.912	ENSDORG00000016614	Smg6	94	97.297	Dipodomys_ordii
ENSRBIG00000024746	SMG6	93	97.619	ENSETEG00000016790	SMG6	93	97.619	Echinops_telfairi
ENSRBIG00000024746	SMG6	73	49.952	ENSEBUG00000005059	smg6	66	49.854	Eptatretus_burgeri
ENSRBIG00000024746	SMG6	99	93.719	ENSEASG00005009318	SMG6	99	93.719	Equus_asinus_asinus
ENSRBIG00000024746	SMG6	99	93.437	ENSECAG00000006519	SMG6	99	93.437	Equus_caballus
ENSRBIG00000024746	SMG6	100	82.030	ENSEEUG00000003493	SMG6	100	82.030	Erinaceus_europaeus
ENSRBIG00000024746	SMG6	71	60.370	ENSELUG00000005934	smg6	69	55.547	Esox_lucius
ENSRBIG00000024746	SMG6	100	94.080	ENSFCAG00000028817	SMG6	100	94.080	Felis_catus
ENSRBIG00000024746	SMG6	98	71.673	ENSFALG00000006538	SMG6	100	71.744	Ficedula_albicollis
ENSRBIG00000024746	SMG6	100	92.248	ENSFDAG00000015106	SMG6	100	92.248	Fukomys_damarensis
ENSRBIG00000024746	SMG6	83	53.427	ENSFHEG00000013282	smg6	75	53.427	Fundulus_heteroclitus
ENSRBIG00000024746	SMG6	61	69.159	ENSGMOG00000019077	smg6	68	69.159	Gadus_morhua
ENSRBIG00000024746	SMG6	100	71.548	ENSGALG00000003108	SMG6	98	71.617	Gallus_gallus
ENSRBIG00000024746	SMG6	83	53.997	ENSGAFG00000000379	smg6	74	54.261	Gambusia_affinis
ENSRBIG00000024746	SMG6	91	54.498	ENSGACG00000020521	smg6	100	54.201	Gasterosteus_aculeatus
ENSRBIG00000024746	SMG6	98	71.560	ENSGAGG00000025617	SMG6	100	72.128	Gopherus_agassizii
ENSRBIG00000024746	SMG6	100	98.238	ENSGGOG00000017156	SMG6	100	98.238	Gorilla_gorilla
ENSRBIG00000024746	SMG6	88	53.662	ENSHBUG00000021311	smg6	80	53.813	Haplochromis_burtoni
ENSRBIG00000024746	SMG6	100	91.837	ENSHGLG00000012882	SMG6	100	91.837	Heterocephalus_glaber_female
ENSRBIG00000024746	SMG6	100	91.907	ENSHGLG00100017815	SMG6	100	91.907	Heterocephalus_glaber_male
ENSRBIG00000024746	SMG6	71	59.160	ENSHCOG00000008761	smg6	83	59.104	Hippocampus_comes
ENSRBIG00000024746	SMG6	83	55.346	ENSIPUG00000012493	smg6	75	54.659	Ictalurus_punctatus
ENSRBIG00000024746	SMG6	100	93.728	ENSSTOG00000028127	SMG6	100	93.728	Ictidomys_tridecemlineatus
ENSRBIG00000024746	SMG6	79	88.760	ENSJJAG00000015367	Smg6	95	86.828	Jaculus_jaculus
ENSRBIG00000024746	SMG6	73	59.246	ENSKMAG00000000279	smg6	91	48.779	Kryptolebias_marmoratus
ENSRBIG00000024746	SMG6	55	58.974	ENSLACG00000000806	-	98	60.417	Latimeria_chalumnae
ENSRBIG00000024746	SMG6	73	65.482	ENSLOCG00000006448	smg6	100	55.232	Lepisosteus_oculatus
ENSRBIG00000024746	SMG6	100	92.953	ENSLAFG00000001261	SMG6	100	92.953	Loxodonta_africana
ENSRBIG00000024746	SMG6	100	98.732	ENSMFAG00000003394	SMG6	100	98.732	Macaca_fascicularis
ENSRBIG00000024746	SMG6	100	98.661	ENSMMUG00000023161	SMG6	100	98.661	Macaca_mulatta
ENSRBIG00000024746	SMG6	100	93.535	ENSMNEG00000044592	SMG6	100	93.535	Macaca_nemestrina
ENSRBIG00000024746	SMG6	98	96.179	ENSMLEG00000029353	SMG6	99	96.179	Mandrillus_leucophaeus
ENSRBIG00000024746	SMG6	83	56.084	ENSMAMG00000020119	smg6	79	56.191	Mastacembelus_armatus
ENSRBIG00000024746	SMG6	71	59.467	ENSMZEG00005024736	smg6	80	53.639	Maylandia_zebra
ENSRBIG00000024746	SMG6	73	66.225	ENSMGAG00000005401	-	99	66.225	Meleagris_gallopavo
ENSRBIG00000024746	SMG6	100	95.137	ENSMICG00000012913	SMG6	100	95.137	Microcebus_murinus
ENSRBIG00000024746	SMG6	100	47.826	ENSMMOG00000010883	smg6	100	48.095	Mola_mola
ENSRBIG00000024746	SMG6	100	85.935	ENSMODG00000010622	SMG6	100	85.935	Monodelphis_domestica
ENSRBIG00000024746	SMG6	83	54.779	ENSMALG00000001106	smg6	73	55.280	Monopterus_albus
ENSRBIG00000024746	SMG6	100	91.684	MGP_CAROLIEiJ_G0016729	Smg6	100	91.684	Mus_caroli
ENSRBIG00000024746	SMG6	100	91.473	ENSMUSG00000038290	Smg6	100	91.473	Mus_musculus
ENSRBIG00000024746	SMG6	100	91.050	MGP_PahariEiJ_G0017866	Smg6	100	91.050	Mus_pahari
ENSRBIG00000024746	SMG6	100	91.473	MGP_SPRETEiJ_G0017572	Smg6	100	91.473	Mus_spretus
ENSRBIG00000024746	SMG6	100	93.164	ENSMPUG00000013046	SMG6	100	93.164	Mustela_putorius_furo
ENSRBIG00000024746	SMG6	100	92.741	ENSMLUG00000005739	SMG6	100	92.741	Myotis_lucifugus
ENSRBIG00000024746	SMG6	98	90.425	ENSNGAG00000007287	Smg6	100	90.425	Nannospalax_galili
ENSRBIG00000024746	SMG6	88	52.691	ENSNBRG00000009511	smg6	100	49.299	Neolamprologus_brichardi
ENSRBIG00000024746	SMG6	98	97.202	ENSNLEG00000017171	SMG6	100	99.022	Nomascus_leucogenys
ENSRBIG00000024746	SMG6	98	82.112	ENSMEUG00000015804	SMG6	100	82.112	Notamacropus_eugenii
ENSRBIG00000024746	SMG6	62	90.498	ENSOPRG00000000579	SMG6	85	96.842	Ochotona_princeps
ENSRBIG00000024746	SMG6	100	85.362	ENSODEG00000008038	SMG6	100	84.118	Octodon_degus
ENSRBIG00000024746	SMG6	100	50.898	ENSONIG00000005594	smg6	100	51.971	Oreochromis_niloticus
ENSRBIG00000024746	SMG6	100	93.103	ENSOCUG00000013018	SMG6	100	93.244	Oryctolagus_cuniculus
ENSRBIG00000024746	SMG6	83	54.724	ENSORLG00000003317	smg6	74	54.945	Oryzias_latipes
ENSRBIG00000024746	SMG6	83	54.811	ENSORLG00020015343	smg6	74	54.638	Oryzias_latipes_hni
ENSRBIG00000024746	SMG6	83	54.760	ENSORLG00015020454	smg6	74	54.902	Oryzias_latipes_hsok
ENSRBIG00000024746	SMG6	83	53.852	ENSOMEG00000010838	smg6	75	54.137	Oryzias_melastigma
ENSRBIG00000024746	SMG6	100	94.507	ENSOGAG00000004483	SMG6	100	94.507	Otolemur_garnettii
ENSRBIG00000024746	SMG6	100	90.775	ENSOARG00000015076	SMG6	100	92.347	Ovis_aries
ENSRBIG00000024746	SMG6	100	97.956	ENSPPAG00000043296	SMG6	100	97.956	Pan_paniscus
ENSRBIG00000024746	SMG6	100	94.221	ENSPPRG00000014581	SMG6	100	94.221	Panthera_pardus
ENSRBIG00000024746	SMG6	98	94.296	ENSPTIG00000008925	SMG6	100	96.869	Panthera_tigris_altaica
ENSRBIG00000024746	SMG6	100	98.027	ENSPTRG00000008544	SMG6	100	98.826	Pan_troglodytes
ENSRBIG00000024746	SMG6	100	98.591	ENSPANG00000024588	SMG6	100	98.591	Papio_anubis
ENSRBIG00000024746	SMG6	89	70.625	ENSPSIG00000006660	SMG6	96	70.703	Pelodiscus_sinensis
ENSRBIG00000024746	SMG6	98	60.279	ENSPMGG00000000844	smg6	100	60.870	Periophthalmus_magnuspinnatus
ENSRBIG00000024746	SMG6	100	92.319	ENSPEMG00000020707	Smg6	100	92.319	Peromyscus_maniculatus_bairdii
ENSRBIG00000024746	SMG6	100	51.438	ENSPFOG00000012035	smg6	100	51.340	Poecilia_formosa
ENSRBIG00000024746	SMG6	77	56.727	ENSPLAG00000017660	smg6	74	54.203	Poecilia_latipinna
ENSRBIG00000024746	SMG6	77	56.851	ENSPMEG00000000258	smg6	74	54.517	Poecilia_mexicana
ENSRBIG00000024746	SMG6	83	54.710	ENSPREG00000010066	smg6	74	54.631	Poecilia_reticulata
ENSRBIG00000024746	SMG6	100	92.335	ENSPPYG00000007790	SMG6	100	92.335	Pongo_abelii
ENSRBIG00000024746	SMG6	100	88.302	ENSPCAG00000000552	SMG6	100	88.302	Procavia_capensis
ENSRBIG00000024746	SMG6	100	94.785	ENSPCOG00000020925	SMG6	100	94.785	Propithecus_coquereli
ENSRBIG00000024746	SMG6	86	100.000	ENSPVAG00000002159	SMG6	86	100.000	Pteropus_vampyrus
ENSRBIG00000024746	SMG6	88	54.490	ENSPNYG00000024151	smg6	86	55.472	Pundamilia_nyererei
ENSRBIG00000024746	SMG6	87	51.756	ENSPNAG00000015480	smg6	87	63.102	Pygocentrus_nattereri
ENSRBIG00000024746	SMG6	100	91.825	ENSRNOG00000003041	Smg6	96	95.894	Rattus_norvegicus
ENSRBIG00000024746	SMG6	100	99.930	ENSRROG00000030423	SMG6	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000024746	SMG6	100	95.913	ENSSBOG00000022518	SMG6	100	94.292	Saimiri_boliviensis_boliviensis
ENSRBIG00000024746	SMG6	98	85.222	ENSSHAG00000010045	SMG6	98	85.222	Sarcophilus_harrisii
ENSRBIG00000024746	SMG6	72	62.233	ENSSFOG00015005436	smg6	73	55.800	Scleropages_formosus
ENSRBIG00000024746	SMG6	83	55.400	ENSSMAG00000019777	smg6	73	54.961	Scophthalmus_maximus
ENSRBIG00000024746	SMG6	89	52.834	ENSSDUG00000016412	smg6	79	52.689	Seriola_dumerili
ENSRBIG00000024746	SMG6	80	54.251	ENSSLDG00000020747	smg6	77	54.008	Seriola_lalandi_dorsalis
ENSRBIG00000024746	SMG6	99	70.334	ENSSPUG00000007152	SMG6	99	70.334	Sphenodon_punctatus
ENSRBIG00000024746	SMG6	71	59.358	ENSSPAG00000015633	smg6	74	55.024	Stegastes_partitus
ENSRBIG00000024746	SMG6	100	92.394	ENSSSCG00000017826	SMG6	100	92.394	Sus_scrofa
ENSRBIG00000024746	SMG6	100	72.020	ENSTGUG00000005836	SMG6	100	72.160	Taeniopygia_guttata
ENSRBIG00000024746	SMG6	83	54.654	ENSTRUG00000000358	smg6	81	55.422	Takifugu_rubripes
ENSRBIG00000024746	SMG6	100	49.735	ENSTNIG00000016164	smg6	100	50.066	Tetraodon_nigroviridis
ENSRBIG00000024746	SMG6	100	89.218	ENSTBEG00000011424	SMG6	100	89.218	Tupaia_belangeri
ENSRBIG00000024746	SMG6	91	91.515	ENSTTRG00000001175	SMG6	91	91.515	Tursiops_truncatus
ENSRBIG00000024746	SMG6	100	93.390	ENSUAMG00000025152	SMG6	100	92.867	Ursus_americanus
ENSRBIG00000024746	SMG6	98	93.718	ENSUMAG00000009306	SMG6	100	93.718	Ursus_maritimus
ENSRBIG00000024746	SMG6	85	92.593	ENSVPAG00000000225	SMG6	88	92.593	Vicugna_pacos
ENSRBIG00000024746	SMG6	100	93.235	ENSVVUG00000021727	SMG6	100	93.235	Vulpes_vulpes
ENSRBIG00000024746	SMG6	98	59.577	ENSXETG00000023799	SMG6	100	59.366	Xenopus_tropicalis
ENSRBIG00000024746	SMG6	83	54.460	ENSXMAG00000010321	smg6	74	54.418	Xiphophorus_maculatus