EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000026096 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 51530 bases
Position: chrMCGX01001772.1:1486790-1538319
Accession: 108527831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000006358	SF3b1	PF08920.10	6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000029329	SF3B1-201	3825	XM_017869308	ENSRBIP00000006358	1274 (aa)	XP_017724797	A0A2K6K4Z4
ENSRBIT00000029373	SF3B1-203	465	-	ENSRBIP00000006383	154 (aa)	-	A0A2K6K520
ENSRBIT00000029339	SF3B1-202	435	-	ENSRBIP00000006362	144 (aa)	-	A0A2K6K540

Gene Model

Click here to download ENSRBIG00000026096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000026096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000026096	SF3B1	100	96.237	ENSG00000115524	SF3B1	99	96.237	Homo_sapiens
ENSRBIG00000026096	SF3B1	100	89.886	ENSAPOG00000011894	sf3b1	99	89.886	Acanthochromis_polyacanthus
ENSRBIG00000026096	SF3B1	99	96.376	ENSAMEG00000013809	SF3B1	99	96.376	Ailuropoda_melanoleuca
ENSRBIG00000026096	SF3B1	100	89.466	ENSACIG00000020910	sf3b1	97	89.313	Amphilophus_citrinellus
ENSRBIG00000026096	SF3B1	100	89.886	ENSAOCG00000004478	sf3b1	99	89.886	Amphiprion_ocellaris
ENSRBIG00000026096	SF3B1	100	89.886	ENSAPEG00000012937	sf3b1	99	89.886	Amphiprion_percula
ENSRBIG00000026096	SF3B1	100	89.954	ENSATEG00000020435	sf3b1	99	90.008	Anabas_testudineus
ENSRBIG00000026096	SF3B1	99	95.830	ENSAPLG00000003993	SF3B1	99	95.830	Anas_platyrhynchos
ENSRBIG00000026096	SF3B1	100	95.161	ENSACAG00000009612	SF3B1	99	95.161	Anolis_carolinensis
ENSRBIG00000026096	SF3B1	100	96.237	ENSANAG00000021577	SF3B1	100	96.028	Aotus_nancymaae
ENSRBIG00000026096	SF3B1	100	89.117	ENSACLG00000023470	sf3b1	99	88.965	Astatotilapia_calliptera
ENSRBIG00000026096	SF3B1	100	90.411	ENSAMXG00000002219	sf3b1	99	90.259	Astyanax_mexicanus
ENSRBIG00000026096	SF3B1	100	96.160	ENSBTAG00000008915	SF3B1	99	96.160	Bos_taurus
ENSRBIG00000026096	SF3B1	98	64.103	WBGene00011605	sftb-1	98	64.178	Caenorhabditis_elegans
ENSRBIG00000026096	SF3B1	100	96.237	ENSCJAG00000003902	SF3B1	99	96.237	Callithrix_jacchus
ENSRBIG00000026096	SF3B1	100	96.237	ENSCAFG00000010826	SF3B1	99	96.237	Canis_familiaris
ENSRBIG00000026096	SF3B1	100	96.237	ENSCAFG00020004750	SF3B1	99	96.237	Canis_lupus_dingo
ENSRBIG00000026096	SF3B1	100	96.160	ENSCHIG00000015226	SF3B1	99	96.282	Capra_hircus
ENSRBIG00000026096	SF3B1	100	96.160	ENSTSYG00000009214	SF3B1	99	96.371	Carlito_syrichta
ENSRBIG00000026096	SF3B1	99	96.448	ENSCAPG00000006547	SF3B1	99	96.448	Cavia_aperea
ENSRBIG00000026096	SF3B1	99	96.448	ENSCPOG00000009353	SF3B1	100	96.445	Cavia_porcellus
ENSRBIG00000026096	SF3B1	100	96.237	ENSCCAG00000020506	SF3B1	99	96.237	Cebus_capucinus
ENSRBIG00000026096	SF3B1	100	96.237	ENSCATG00000035735	SF3B1	99	96.237	Cercocebus_atys
ENSRBIG00000026096	SF3B1	99	96.451	ENSCLAG00000014767	SF3B1	99	96.451	Chinchilla_lanigera
ENSRBIG00000026096	SF3B1	100	96.237	ENSCSAG00000011505	SF3B1	99	96.237	Chlorocebus_sabaeus
ENSRBIG00000026096	SF3B1	76	96.154	ENSCHOG00000009860	SF3B1	76	96.154	Choloepus_hoffmanni
ENSRBIG00000026096	SF3B1	100	95.469	ENSCPBG00000021902	SF3B1	99	95.505	Chrysemys_picta_bellii
ENSRBIG00000026096	SF3B1	68	73.429	ENSCING00000002558	-	99	74.078	Ciona_intestinalis
ENSRBIG00000026096	SF3B1	99	76.748	ENSCSAVG00000002559	-	99	76.350	Ciona_savignyi
ENSRBIG00000026096	SF3B1	100	96.237	ENSCANG00000029415	SF3B1	99	96.448	Colobus_angolensis_palliatus
ENSRBIG00000026096	SF3B1	100	96.237	ENSCGRG00001016990	Sf3b1	99	96.445	Cricetulus_griseus_chok1gshd
ENSRBIG00000026096	SF3B1	100	96.237	ENSCGRG00000005301	Sf3b1	99	96.445	Cricetulus_griseus_crigri
ENSRBIG00000026096	SF3B1	99	87.782	ENSCSEG00000003860	sf3b1	99	87.626	Cynoglossus_semilaevis
ENSRBIG00000026096	SF3B1	96	89.786	ENSCVAG00000003680	sf3b1	99	89.786	Cyprinodon_variegatus
ENSRBIG00000026096	SF3B1	100	89.886	ENSDARG00000056138	sf3b1	99	89.810	Danio_rerio
ENSRBIG00000026096	SF3B1	100	96.163	ENSDNOG00000011754	SF3B1	99	96.163	Dasypus_novemcinctus
ENSRBIG00000026096	SF3B1	99	93.745	ENSDORG00000002399	Sf3b1	100	93.745	Dipodomys_ordii
ENSRBIG00000026096	SF3B1	99	73.797	FBgn0031266	Sf3b1	99	73.797	Drosophila_melanogaster
ENSRBIG00000026096	SF3B1	83	95.083	ENSETEG00000009188	SF3B1	100	95.083	Echinops_telfairi
ENSRBIG00000026096	SF3B1	99	83.627	ENSEBUG00000004325	sf3b1	100	86.285	Eptatretus_burgeri
ENSRBIG00000026096	SF3B1	100	96.160	ENSEASG00005020159	SF3B1	97	96.160	Equus_asinus_asinus
ENSRBIG00000026096	SF3B1	100	96.160	ENSECAG00000021657	SF3B1	97	96.160	Equus_caballus
ENSRBIG00000026096	SF3B1	84	100.000	ENSEEUG00000000836	SF3B1	76	100.000	Erinaceus_europaeus
ENSRBIG00000026096	SF3B1	100	89.418	ENSELUG00000005977	sf3b1	98	89.267	Esox_lucius
ENSRBIG00000026096	SF3B1	100	96.237	ENSFCAG00000005038	SF3B1	99	96.448	Felis_catus
ENSRBIG00000026096	SF3B1	99	95.907	ENSFALG00000004281	SF3B1	99	95.907	Ficedula_albicollis
ENSRBIG00000026096	SF3B1	100	96.237	ENSFDAG00000017510	SF3B1	99	96.237	Fukomys_damarensis
ENSRBIG00000026096	SF3B1	100	89.202	ENSFHEG00000014333	sf3b1	99	89.202	Fundulus_heteroclitus
ENSRBIG00000026096	SF3B1	100	89.787	ENSGMOG00000006773	sf3b1	99	89.787	Gadus_morhua
ENSRBIG00000026096	SF3B1	100	95.622	ENSGALG00000008038	SF3B1	99	95.622	Gallus_gallus
ENSRBIG00000026096	SF3B1	99	89.892	ENSGAFG00000000704	sf3b1	99	89.892	Gambusia_affinis
ENSRBIG00000026096	SF3B1	100	89.924	ENSGACG00000008839	sf3b1	99	89.924	Gasterosteus_aculeatus
ENSRBIG00000026096	SF3B1	99	95.676	ENSGAGG00000017478	SF3B1	99	95.676	Gopherus_agassizii
ENSRBIG00000026096	SF3B1	99	89.639	ENSGGOG00000009264	SF3B1	99	90.965	Gorilla_gorilla
ENSRBIG00000026096	SF3B1	99	89.177	ENSHBUG00000007705	sf3b1	99	89.024	Haplochromis_burtoni
ENSRBIG00000026096	SF3B1	99	96.451	ENSHGLG00000008285	-	99	96.451	Heterocephalus_glaber_female
ENSRBIG00000026096	SF3B1	99	94.444	ENSHGLG00100005535	-	99	94.444	Heterocephalus_glaber_male
ENSRBIG00000026096	SF3B1	100	89.334	ENSHCOG00000016775	sf3b1	99	89.183	Hippocampus_comes
ENSRBIG00000026096	SF3B1	100	90.259	ENSIPUG00000013171	sf3b1	99	90.259	Ictalurus_punctatus
ENSRBIG00000026096	SF3B1	100	96.237	ENSSTOG00000011034	SF3B1	99	96.237	Ictidomys_tridecemlineatus
ENSRBIG00000026096	SF3B1	99	96.357	ENSJJAG00000010903	Sf3b1	99	96.357	Jaculus_jaculus
ENSRBIG00000026096	SF3B1	100	89.378	ENSKMAG00000004009	sf3b1	99	89.302	Kryptolebias_marmoratus
ENSRBIG00000026096	SF3B1	100	89.832	ENSLBEG00000022208	sf3b1	99	89.679	Labrus_bergylta
ENSRBIG00000026096	SF3B1	99	91.988	ENSLACG00000014832	SF3B1	99	91.865	Latimeria_chalumnae
ENSRBIG00000026096	SF3B1	100	91.185	ENSLOCG00000003899	sf3b1	99	91.033	Lepisosteus_oculatus
ENSRBIG00000026096	SF3B1	100	96.237	ENSLAFG00000001956	SF3B1	99	96.371	Loxodonta_africana
ENSRBIG00000026096	SF3B1	100	96.154	ENSMMUG00000022430	SF3B1	99	96.448	Macaca_mulatta
ENSRBIG00000026096	SF3B1	100	96.237	ENSMNEG00000042333	SF3B1	100	96.028	Macaca_nemestrina
ENSRBIG00000026096	SF3B1	95	89.775	ENSMLEG00000026141	SF3B1	98	90.236	Mandrillus_leucophaeus
ENSRBIG00000026096	SF3B1	100	89.878	ENSMAMG00000010241	sf3b1	99	89.878	Mastacembelus_armatus
ENSRBIG00000026096	SF3B1	100	89.117	ENSMZEG00005021254	sf3b1	99	88.965	Maylandia_zebra
ENSRBIG00000026096	SF3B1	99	95.212	ENSMGAG00000007017	SF3B1	99	95.212	Meleagris_gallopavo
ENSRBIG00000026096	SF3B1	99	92.207	ENSMAUG00000009071	Sf3b1	99	92.207	Mesocricetus_auratus
ENSRBIG00000026096	SF3B1	100	96.160	ENSMICG00000013879	SF3B1	99	96.373	Microcebus_murinus
ENSRBIG00000026096	SF3B1	99	91.840	ENSMOCG00000000455	Sf3b1	99	91.840	Microtus_ochrogaster
ENSRBIG00000026096	SF3B1	83	88.858	ENSMMOG00000000475	sf3b1	99	88.858	Mola_mola
ENSRBIG00000026096	SF3B1	100	95.545	ENSMODG00000012275	SF3B1	99	95.545	Monodelphis_domestica
ENSRBIG00000026096	SF3B1	100	89.802	ENSMALG00000017211	sf3b1	99	89.802	Monopterus_albus
ENSRBIG00000026096	SF3B1	100	96.237	MGP_CAROLIEiJ_G0014141	Sf3b1	99	96.237	Mus_caroli
ENSRBIG00000026096	SF3B1	100	96.237	ENSMUSG00000025982	Sf3b1	99	96.237	Mus_musculus
ENSRBIG00000026096	SF3B1	100	96.237	MGP_SPRETEiJ_G0014947	Sf3b1	99	96.237	Mus_spretus
ENSRBIG00000026096	SF3B1	100	96.237	ENSMPUG00000007799	SF3B1	99	96.237	Mustela_putorius_furo
ENSRBIG00000026096	SF3B1	100	95.008	ENSMLUG00000000840	SF3B1	99	95.008	Myotis_lucifugus
ENSRBIG00000026096	SF3B1	99	96.445	ENSNGAG00000021884	-	99	96.445	Nannospalax_galili
ENSRBIG00000026096	SF3B1	100	85.355	ENSNBRG00000015816	sf3b1	99	85.355	Neolamprologus_brichardi
ENSRBIG00000026096	SF3B1	100	96.237	ENSNLEG00000006861	SF3B1	99	96.237	Nomascus_leucogenys
ENSRBIG00000026096	SF3B1	68	100.000	ENSMEUG00000015848	-	64	100.000	Notamacropus_eugenii
ENSRBIG00000026096	SF3B1	100	87.020	ENSOPRG00000008596	SF3B1	99	87.020	Ochotona_princeps
ENSRBIG00000026096	SF3B1	100	96.237	ENSODEG00000011153	-	99	96.237	Octodon_degus
ENSRBIG00000026096	SF3B1	100	89.117	ENSONIG00000013758	sf3b1	99	88.965	Oreochromis_niloticus
ENSRBIG00000026096	SF3B1	83	94.742	ENSOCUG00000012722	-	96	94.742	Oryctolagus_cuniculus
ENSRBIG00000026096	SF3B1	100	89.650	ENSORLG00000020219	sf3b1	99	89.650	Oryzias_latipes
ENSRBIG00000026096	SF3B1	100	89.650	ENSORLG00020001746	sf3b1	99	89.650	Oryzias_latipes_hni
ENSRBIG00000026096	SF3B1	62	89.084	ENSORLG00015001759	sf3b1	93	89.084	Oryzias_latipes_hsok
ENSRBIG00000026096	SF3B1	100	89.658	ENSOMEG00000019231	sf3b1	99	89.658	Oryzias_melastigma
ENSRBIG00000026096	SF3B1	100	96.160	ENSOARG00000015374	SF3B1	99	96.160	Ovis_aries
ENSRBIG00000026096	SF3B1	100	96.237	ENSPPAG00000035007	SF3B1	99	96.448	Pan_paniscus
ENSRBIG00000026096	SF3B1	100	96.237	ENSPPRG00000009090	SF3B1	99	96.237	Panthera_pardus
ENSRBIG00000026096	SF3B1	100	96.237	ENSPTIG00000021557	SF3B1	99	96.237	Panthera_tigris_altaica
ENSRBIG00000026096	SF3B1	99	87.914	ENSPTRG00000012771	SF3B1	99	87.914	Pan_troglodytes
ENSRBIG00000026096	SF3B1	100	96.237	ENSPANG00000013417	SF3B1	99	96.237	Papio_anubis
ENSRBIG00000026096	SF3B1	100	91.311	ENSPKIG00000000784	sf3b1	99	91.159	Paramormyrops_kingsleyae
ENSRBIG00000026096	SF3B1	99	94.436	ENSPSIG00000017222	SF3B1	98	94.436	Pelodiscus_sinensis
ENSRBIG00000026096	SF3B1	90	89.873	ENSPMGG00000004330	sf3b1	99	89.705	Periophthalmus_magnuspinnatus
ENSRBIG00000026096	SF3B1	99	96.448	ENSPEMG00000010699	Sf3b1	100	96.448	Peromyscus_maniculatus_bairdii
ENSRBIG00000026096	SF3B1	99	86.794	ENSPMAG00000001311	sf3b1	99	86.947	Petromyzon_marinus
ENSRBIG00000026096	SF3B1	100	95.469	ENSPCIG00000010642	SF3B1	99	95.469	Phascolarctos_cinereus
ENSRBIG00000026096	SF3B1	100	89.590	ENSPFOG00000000073	sf3b1	99	89.590	Poecilia_formosa
ENSRBIG00000026096	SF3B1	100	89.658	ENSPLAG00000002293	sf3b1	99	89.658	Poecilia_latipinna
ENSRBIG00000026096	SF3B1	100	89.658	ENSPMEG00000000446	sf3b1	98	89.658	Poecilia_mexicana
ENSRBIG00000026096	SF3B1	100	89.734	ENSPREG00000019652	sf3b1	99	89.734	Poecilia_reticulata
ENSRBIG00000026096	SF3B1	100	94.617	ENSPPYG00000013044	SF3B1	99	94.617	Pongo_abelii
ENSRBIG00000026096	SF3B1	100	96.083	ENSPCAG00000009292	SF3B1	99	96.083	Procavia_capensis
ENSRBIG00000026096	SF3B1	100	96.160	ENSPCOG00000024074	SF3B1	99	96.160	Propithecus_coquereli
ENSRBIG00000026096	SF3B1	100	96.237	ENSPVAG00000008302	SF3B1	99	96.237	Pteropus_vampyrus
ENSRBIG00000026096	SF3B1	100	89.041	ENSPNYG00000014939	sf3b1	99	88.889	Pundamilia_nyererei
ENSRBIG00000026096	SF3B1	100	90.259	ENSPNAG00000008288	sf3b1	99	90.259	Pygocentrus_nattereri
ENSRBIG00000026096	SF3B1	100	96.237	ENSRNOG00000013516	Sf3b1	99	96.237	Rattus_norvegicus
ENSRBIG00000026096	SF3B1	100	96.462	ENSRROG00000031308	SF3B1	100	96.462	Rhinopithecus_roxellana
ENSRBIG00000026096	SF3B1	100	96.237	ENSSBOG00000020080	SF3B1	99	96.237	Saimiri_boliviensis_boliviensis
ENSRBIG00000026096	SF3B1	100	95.545	ENSSHAG00000017564	SF3B1	99	95.545	Sarcophilus_harrisii
ENSRBIG00000026096	SF3B1	100	90.875	ENSSFOG00015021535	sf3b1	99	91.027	Scleropages_formosus
ENSRBIG00000026096	SF3B1	99	89.226	ENSSMAG00000013977	sf3b1	99	89.074	Scophthalmus_maximus
ENSRBIG00000026096	SF3B1	100	89.650	ENSSDUG00000017422	sf3b1	99	89.650	Seriola_dumerili
ENSRBIG00000026096	SF3B1	100	89.574	ENSSLDG00000019495	sf3b1	99	89.574	Seriola_lalandi_dorsalis
ENSRBIG00000026096	SF3B1	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSRBIG00000026096	SF3B1	100	95.315	ENSSPUG00000000410	SF3B1	99	95.315	Sphenodon_punctatus
ENSRBIG00000026096	SF3B1	100	89.954	ENSSPAG00000010451	sf3b1	99	89.954	Stegastes_partitus
ENSRBIG00000026096	SF3B1	91	95.451	ENSSSCG00000016075	SF3B1	100	96.028	Sus_scrofa
ENSRBIG00000026096	SF3B1	100	95.545	ENSTGUG00000010553	SF3B1	99	95.545	Taeniopygia_guttata
ENSRBIG00000026096	SF3B1	99	89.901	ENSTRUG00000015534	sf3b1	99	89.748	Takifugu_rubripes
ENSRBIG00000026096	SF3B1	87	97.794	ENSTBEG00000008714	SF3B1	93	97.794	Tupaia_belangeri
ENSRBIG00000026096	SF3B1	92	90.754	ENSTTRG00000003414	SF3B1	92	90.754	Tursiops_truncatus
ENSRBIG00000026096	SF3B1	84	100.000	ENSUAMG00000018506	SF3B1	97	100.000	Ursus_americanus
ENSRBIG00000026096	SF3B1	100	96.237	ENSUMAG00000020945	SF3B1	99	96.237	Ursus_maritimus
ENSRBIG00000026096	SF3B1	100	88.095	ENSVPAG00000005798	SF3B1	99	88.095	Vicugna_pacos
ENSRBIG00000026096	SF3B1	100	96.237	ENSVVUG00000025948	SF3B1	94	96.237	Vulpes_vulpes
ENSRBIG00000026096	SF3B1	100	92.923	ENSXETG00000013339	sf3b1	99	92.923	Xenopus_tropicalis
ENSRBIG00000026096	SF3B1	100	86.141	ENSXCOG00000018086	sf3b1	99	86.041	Xiphophorus_couchianus
ENSRBIG00000026096	SF3B1	100	89.658	ENSXMAG00000007369	sf3b1	99	89.908	Xiphophorus_maculatus