EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000027722 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 12684 bases
Position: chrMCGX01005181.1:4098502-4111185
Accession: 108537514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000007645	MBD	PF01429.19	2.5e-21	1	1
ENSRBIP00000007656	MBD	PF01429.19	5.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000031257	MBD4-202	1509	-	ENSRBIP00000007656	502 (aa)	-	A0A2K6K8N3
ENSRBIT00000031246	MBD4-201	2306	XM_017885020	ENSRBIP00000007645	572 (aa)	XP_017740509	A0A2K6K8P2

Gene Model

Click here to download ENSRBIG00000027722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000027722's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000027722	MBD4	100	94.261	ENSG00000129071	MBD4	100	94.261	Homo_sapiens
ENSRBIG00000027722	MBD4	99	76.430	ENSAMEG00000004562	MBD4	99	76.430	Ailuropoda_melanoleuca
ENSRBIG00000027722	MBD4	52	59.494	ENSAOCG00000001157	mbd4	62	59.494	Amphiprion_ocellaris
ENSRBIG00000027722	MBD4	99	71.030	ENSBTAG00000021645	MBD4	100	71.030	Bos_taurus
ENSRBIG00000027722	MBD4	100	86.874	ENSCJAG00000017293	MBD4	100	86.874	Callithrix_jacchus
ENSRBIG00000027722	MBD4	99	76.042	ENSCAFG00000004867	MBD4	99	76.042	Canis_familiaris
ENSRBIG00000027722	MBD4	99	76.042	ENSCAFG00020007082	MBD4	99	76.042	Canis_lupus_dingo
ENSRBIG00000027722	MBD4	99	69.808	ENSCHIG00000009760	MBD4	100	69.808	Capra_hircus
ENSRBIG00000027722	MBD4	100	88.083	ENSCCAG00000029796	MBD4	100	88.083	Cebus_capucinus
ENSRBIG00000027722	MBD4	100	98.427	ENSCATG00000035211	MBD4	100	98.427	Cercocebus_atys
ENSRBIG00000027722	MBD4	98	69.894	ENSCLAG00000008974	MBD4	99	69.542	Chinchilla_lanigera
ENSRBIG00000027722	MBD4	100	97.378	ENSCSAG00000009037	MBD4	100	97.378	Chlorocebus_sabaeus
ENSRBIG00000027722	MBD4	65	87.023	ENSCPBG00000014704	MBD4	60	87.023	Chrysemys_picta_bellii
ENSRBIG00000027722	MBD4	100	98.951	ENSCANG00000007120	MBD4	100	98.951	Colobus_angolensis_palliatus
ENSRBIG00000027722	MBD4	99	67.483	ENSCGRG00001003507	Mbd4	100	67.483	Cricetulus_griseus_chok1gshd
ENSRBIG00000027722	MBD4	99	67.483	ENSCGRG00000010974	Mbd4	100	67.483	Cricetulus_griseus_crigri
ENSRBIG00000027722	MBD4	99	76.357	ENSDNOG00000049619	MBD4	100	76.357	Dasypus_novemcinctus
ENSRBIG00000027722	MBD4	80	63.169	ENSDORG00000000902	-	95	63.169	Dipodomys_ordii
ENSRBIG00000027722	MBD4	54	50.382	ENSEBUG00000010816	mbd4	73	50.382	Eptatretus_burgeri
ENSRBIG00000027722	MBD4	99	78.360	ENSEASG00005014800	MBD4	100	78.360	Equus_asinus_asinus
ENSRBIG00000027722	MBD4	99	78.360	ENSECAG00000022106	MBD4	100	78.360	Equus_caballus
ENSRBIG00000027722	MBD4	95	60.909	ENSEEUG00000011459	MBD4	93	63.889	Erinaceus_europaeus
ENSRBIG00000027722	MBD4	99	77.855	ENSFCAG00000000083	MBD4	99	77.855	Felis_catus
ENSRBIG00000027722	MBD4	81	45.267	ENSFALG00000013663	MBD4	67	81.061	Ficedula_albicollis
ENSRBIG00000027722	MBD4	70	87.786	ENSGAGG00000018644	MBD4	65	87.786	Gopherus_agassizii
ENSRBIG00000027722	MBD4	100	92.599	ENSGGOG00000010698	MBD4	100	92.599	Gorilla_gorilla
ENSRBIG00000027722	MBD4	96	73.070	ENSHGLG00000009034	MBD4	98	73.070	Heterocephalus_glaber_female
ENSRBIG00000027722	MBD4	96	73.070	ENSHGLG00100000135	MBD4	98	73.070	Heterocephalus_glaber_male
ENSRBIG00000027722	MBD4	99	73.063	ENSSTOG00000020663	MBD4	100	73.063	Ictidomys_tridecemlineatus
ENSRBIG00000027722	MBD4	99	74.870	ENSLAFG00000010609	MBD4	99	74.870	Loxodonta_africana
ENSRBIG00000027722	MBD4	100	97.378	ENSMFAG00000002266	MBD4	100	97.378	Macaca_fascicularis
ENSRBIG00000027722	MBD4	100	97.012	ENSMMUG00000012723	MBD4	100	97.012	Macaca_mulatta
ENSRBIG00000027722	MBD4	96	97.080	ENSMNEG00000029752	MBD4	99	97.080	Macaca_nemestrina
ENSRBIG00000027722	MBD4	100	98.252	ENSMLEG00000024859	MBD4	100	98.252	Mandrillus_leucophaeus
ENSRBIG00000027722	MBD4	100	80.656	ENSMICG00000008022	MBD4	100	80.656	Microcebus_murinus
ENSRBIG00000027722	MBD4	75	50.000	ENSMOCG00000002466	-	99	49.476	Microtus_ochrogaster
ENSRBIG00000027722	MBD4	86	58.882	ENSMODG00000006399	-	99	58.483	Monodelphis_domestica
ENSRBIG00000027722	MBD4	99	66.608	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.608	Mus_caroli
ENSRBIG00000027722	MBD4	99	66.084	ENSMUSG00000030322	Mbd4	100	66.084	Mus_musculus
ENSRBIG00000027722	MBD4	99	67.365	MGP_PahariEiJ_G0022511	-	100	67.365	Mus_pahari
ENSRBIG00000027722	MBD4	99	65.559	MGP_SPRETEiJ_G0029788	Mbd4	100	65.559	Mus_spretus
ENSRBIG00000027722	MBD4	99	75.044	ENSMPUG00000017195	MBD4	99	75.044	Mustela_putorius_furo
ENSRBIG00000027722	MBD4	94	79.121	ENSMLUG00000014766	MBD4	97	80.114	Myotis_lucifugus
ENSRBIG00000027722	MBD4	100	93.264	ENSNLEG00000005337	MBD4	100	93.264	Nomascus_leucogenys
ENSRBIG00000027722	MBD4	99	64.594	ENSOPRG00000000473	MBD4	99	64.594	Ochotona_princeps
ENSRBIG00000027722	MBD4	85	40.901	ENSONIG00000017212	mbd4	100	40.338	Oreochromis_niloticus
ENSRBIG00000027722	MBD4	72	45.863	ENSOANG00000004589	-	89	48.205	Ornithorhynchus_anatinus
ENSRBIG00000027722	MBD4	99	67.526	ENSOCUG00000013006	MBD4	100	67.526	Oryctolagus_cuniculus
ENSRBIG00000027722	MBD4	99	76.696	ENSOGAG00000010236	MBD4	100	76.348	Otolemur_garnettii
ENSRBIG00000027722	MBD4	99	69.983	ENSOARG00000014699	MBD4	100	69.983	Ovis_aries
ENSRBIG00000027722	MBD4	100	93.913	ENSPPAG00000036528	MBD4	100	93.913	Pan_paniscus
ENSRBIG00000027722	MBD4	99	77.622	ENSPPRG00000016480	MBD4	99	77.622	Panthera_pardus
ENSRBIG00000027722	MBD4	100	92.771	ENSPTRG00000015377	MBD4	100	92.771	Pan_troglodytes
ENSRBIG00000027722	MBD4	100	97.610	ENSPANG00000015047	MBD4	100	97.610	Papio_anubis
ENSRBIG00000027722	MBD4	65	83.824	ENSPSIG00000007892	MBD4	59	83.824	Pelodiscus_sinensis
ENSRBIG00000027722	MBD4	90	61.686	ENSPEMG00000006226	Mbd4	97	61.686	Peromyscus_maniculatus_bairdii
ENSRBIG00000027722	MBD4	89	58.206	ENSPCIG00000002276	-	98	57.824	Phascolarctos_cinereus
ENSRBIG00000027722	MBD4	83	40.774	ENSPFOG00000014471	mbd4	54	78.363	Poecilia_formosa
ENSRBIG00000027722	MBD4	100	93.892	ENSPPYG00000013417	MBD4	100	93.892	Pongo_abelii
ENSRBIG00000027722	MBD4	95	70.705	ENSPCAG00000012915	MBD4	99	70.705	Procavia_capensis
ENSRBIG00000027722	MBD4	99	78.683	ENSPVAG00000005238	MBD4	99	78.336	Pteropus_vampyrus
ENSRBIG00000027722	MBD4	99	66.609	ENSRNOG00000010919	Mbd4	100	66.609	Rattus_norvegicus
ENSRBIG00000027722	MBD4	100	99.650	ENSRROG00000029136	MBD4	100	99.650	Rhinopithecus_roxellana
ENSRBIG00000027722	MBD4	99	88.021	ENSSBOG00000016810	MBD4	100	87.500	Saimiri_boliviensis_boliviensis
ENSRBIG00000027722	MBD4	93	56.007	ENSSHAG00000012953	MBD4	92	56.391	Sarcophilus_harrisii
ENSRBIG00000027722	MBD4	85	43.874	ENSSFOG00015016292	mbd4	95	43.676	Scleropages_formosus
ENSRBIG00000027722	MBD4	86	44.639	ENSSMAG00000013958	-	68	44.291	Scophthalmus_maximus
ENSRBIG00000027722	MBD4	80	61.588	ENSSARG00000004496	-	80	61.588	Sorex_araneus
ENSRBIG00000027722	MBD4	69	86.154	ENSSPUG00000017344	MBD4	67	86.154	Sphenodon_punctatus
ENSRBIG00000027722	MBD4	99	75.044	ENSSSCG00000033303	MBD4	100	75.044	Sus_scrofa
ENSRBIG00000027722	MBD4	83	37.826	ENSTNIG00000017927	mbd4	100	37.199	Tetraodon_nigroviridis
ENSRBIG00000027722	MBD4	95	60.550	ENSTBEG00000003041	-	86	60.550	Tupaia_belangeri
ENSRBIG00000027722	MBD4	97	76.418	ENSTTRG00000011265	MBD4	100	76.418	Tursiops_truncatus
ENSRBIG00000027722	MBD4	86	78.958	ENSUAMG00000000814	MBD4	99	78.958	Ursus_americanus
ENSRBIG00000027722	MBD4	99	76.614	ENSUMAG00000017542	MBD4	100	76.614	Ursus_maritimus
ENSRBIG00000027722	MBD4	60	95.238	ENSVPAG00000004040	-	55	95.238	Vicugna_pacos
ENSRBIG00000027722	MBD4	99	75.390	ENSVVUG00000014222	MBD4	99	75.521	Vulpes_vulpes
ENSRBIG00000027722	MBD4	83	41.758	ENSXETG00000026622	mbd4	89	41.758	Xenopus_tropicalis