EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000027777 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 86339 bases
Position: chrMCGX01004156.1:5021723-5108061
Accession: 108534195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000007799	Ago_hook	PF10427.9	2e-21	1	1
ENSRBIP00000007803	Ago_hook	PF10427.9	2.2e-21	1	1
ENSRBIP00000007779	Ago_hook	PF10427.9	8.4e-21	1	1
ENSRBIP00000007803	RRM_1	PF00076.22	0.00033	1	1
ENSRBIP00000007779	RRM_1	PF00076.22	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000031401	TNRC6C-202	5808	-	ENSRBIP00000007799	1935 (aa)	-	A0A2K6K967
ENSRBIT00000031381	TNRC6C-201	9662	XM_017879418	ENSRBIP00000007779	1725 (aa)	XP_017734907	A0A2K6K938
ENSRBIT00000031405	TNRC6C-203	5070	XM_017879421	ENSRBIP00000007803	1689 (aa)	XP_017734910	A0A2K6K963

Gene Model

Click here to download ENSRBIG00000027777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000027777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000027777	TNRC6C	98	37.307	ENSRBIG00000035576	TNRC6B	92	51.282
ENSRBIG00000027777	TNRC6C	98	44.320	ENSRBIG00000014222	TNRC6A	98	49.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000027777	TNRC6C	100	98.957	ENSG00000078687	TNRC6C	100	100.000	Homo_sapiens
ENSRBIG00000027777	TNRC6C	80	54.689	ENSAPOG00000019749	tnrc6c1	98	49.262	Acanthochromis_polyacanthus
ENSRBIG00000027777	TNRC6C	100	89.416	ENSAMEG00000013756	TNRC6C	99	89.010	Ailuropoda_melanoleuca
ENSRBIG00000027777	TNRC6C	94	50.240	ENSACIG00000008075	tnrc6c1	98	54.303	Amphilophus_citrinellus
ENSRBIG00000027777	TNRC6C	77	69.120	ENSAOCG00000023968	tnrc6c1	99	49.155	Amphiprion_ocellaris
ENSRBIG00000027777	TNRC6C	80	54.405	ENSAPEG00000009020	tnrc6c1	99	49.053	Amphiprion_percula
ENSRBIG00000027777	TNRC6C	100	86.991	ENSAPLG00000005456	TNRC6C	100	86.422	Anas_platyrhynchos
ENSRBIG00000027777	TNRC6C	100	87.731	ENSACAG00000016198	TNRC6C	98	86.823	Anolis_carolinensis
ENSRBIG00000027777	TNRC6C	100	97.987	ENSANAG00000021554	TNRC6C	100	97.987	Aotus_nancymaae
ENSRBIG00000027777	TNRC6C	100	48.806	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSRBIG00000027777	TNRC6C	97	91.076	ENSBTAG00000018658	TNRC6C	100	88.128	Bos_taurus
ENSRBIG00000027777	TNRC6C	100	97.928	ENSCJAG00000019431	TNRC6C	100	97.928	Callithrix_jacchus
ENSRBIG00000027777	TNRC6C	100	91.430	ENSCAFG00000005224	TNRC6C	99	90.923	Canis_familiaris
ENSRBIG00000027777	TNRC6C	100	91.066	ENSCAFG00020006661	TNRC6C	100	90.361	Canis_lupus_dingo
ENSRBIG00000027777	TNRC6C	100	87.515	ENSCHIG00000026004	TNRC6C	100	86.059	Capra_hircus
ENSRBIG00000027777	TNRC6C	100	96.000	ENSTSYG00000005403	TNRC6C	100	96.000	Carlito_syrichta
ENSRBIG00000027777	TNRC6C	100	84.706	ENSCAPG00000007307	TNRC6C	99	83.814	Cavia_aperea
ENSRBIG00000027777	TNRC6C	100	89.994	ENSCPOG00000000467	TNRC6C	100	88.054	Cavia_porcellus
ENSRBIG00000027777	TNRC6C	100	98.319	ENSCCAG00000030524	TNRC6C	100	98.319	Cebus_capucinus
ENSRBIG00000027777	TNRC6C	100	99.362	ENSCATG00000033135	TNRC6C	100	99.362	Cercocebus_atys
ENSRBIG00000027777	TNRC6C	100	92.895	ENSCLAG00000011139	TNRC6C	99	90.183	Chinchilla_lanigera
ENSRBIG00000027777	TNRC6C	100	99.304	ENSCSAG00000005167	TNRC6C	99	98.903	Chlorocebus_sabaeus
ENSRBIG00000027777	TNRC6C	75	92.210	ENSCHOG00000000088	TNRC6C	72	91.332	Choloepus_hoffmanni
ENSRBIG00000027777	TNRC6C	100	88.187	ENSCPBG00000027960	TNRC6C	100	88.187	Chrysemys_picta_bellii
ENSRBIG00000027777	TNRC6C	100	99.188	ENSCANG00000041771	TNRC6C	100	99.188	Colobus_angolensis_palliatus
ENSRBIG00000027777	TNRC6C	100	89.747	ENSCGRG00001022686	Tnrc6c	100	88.568	Cricetulus_griseus_chok1gshd
ENSRBIG00000027777	TNRC6C	100	90.172	ENSCGRG00000018041	Tnrc6c	100	88.568	Cricetulus_griseus_crigri
ENSRBIG00000027777	TNRC6C	80	52.990	ENSCSEG00000012744	tnrc6c1	98	45.815	Cynoglossus_semilaevis
ENSRBIG00000027777	TNRC6C	100	54.365	ENSDARG00000076847	tnrc6c1	99	54.370	Danio_rerio
ENSRBIG00000027777	TNRC6C	100	91.151	ENSDNOG00000003247	TNRC6C	99	88.953	Dasypus_novemcinctus
ENSRBIG00000027777	TNRC6C	100	85.756	ENSDORG00000004558	Tnrc6c	100	85.580	Dipodomys_ordii
ENSRBIG00000027777	TNRC6C	90	83.130	ENSETEG00000005527	TNRC6C	86	83.715	Echinops_telfairi
ENSRBIG00000027777	TNRC6C	100	91.065	ENSEASG00005004799	TNRC6C	100	91.124	Equus_asinus_asinus
ENSRBIG00000027777	TNRC6C	100	91.194	ENSECAG00000012486	TNRC6C	99	90.083	Equus_caballus
ENSRBIG00000027777	TNRC6C	96	91.312	ENSEEUG00000010008	TNRC6C	96	91.878	Erinaceus_europaeus
ENSRBIG00000027777	TNRC6C	100	89.073	ENSFCAG00000028358	TNRC6C	100	89.014	Felis_catus
ENSRBIG00000027777	TNRC6C	100	87.124	ENSFALG00000000848	TNRC6C	100	86.387	Ficedula_albicollis
ENSRBIG00000027777	TNRC6C	100	91.237	ENSFDAG00000010368	TNRC6C	100	89.568	Fukomys_damarensis
ENSRBIG00000027777	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.788	Fundulus_heteroclitus
ENSRBIG00000027777	TNRC6C	100	88.992	ENSGALG00000001725	TNRC6C	100	88.521	Gallus_gallus
ENSRBIG00000027777	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSRBIG00000027777	TNRC6C	92	52.701	ENSGACG00000012320	tnrc6c1	97	48.016	Gasterosteus_aculeatus
ENSRBIG00000027777	TNRC6C	100	87.803	ENSGAGG00000022043	TNRC6C	99	87.596	Gopherus_agassizii
ENSRBIG00000027777	TNRC6C	100	98.204	ENSGGOG00000011304	TNRC6C	100	98.204	Gorilla_gorilla
ENSRBIG00000027777	TNRC6C	100	47.802	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSRBIG00000027777	TNRC6C	100	92.540	ENSHGLG00000004809	TNRC6C	99	89.718	Heterocephalus_glaber_female
ENSRBIG00000027777	TNRC6C	100	91.514	ENSHGLG00100012597	TNRC6C	99	89.875	Heterocephalus_glaber_male
ENSRBIG00000027777	TNRC6C	98	51.167	ENSIPUG00000000818	tnrc6c1	98	51.705	Ictalurus_punctatus
ENSRBIG00000027777	TNRC6C	100	91.189	ENSSTOG00000009101	TNRC6C	100	88.908	Ictidomys_tridecemlineatus
ENSRBIG00000027777	TNRC6C	100	88.568	ENSJJAG00000017055	Tnrc6c	99	86.750	Jaculus_jaculus
ENSRBIG00000027777	TNRC6C	98	48.878	ENSKMAG00000021023	tnrc6c1	100	50.720	Kryptolebias_marmoratus
ENSRBIG00000027777	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.138	Latimeria_chalumnae
ENSRBIG00000027777	TNRC6C	99	56.696	ENSLOCG00000013377	tnrc6c1	98	55.594	Lepisosteus_oculatus
ENSRBIG00000027777	TNRC6C	100	90.572	ENSLAFG00000011122	TNRC6C	99	88.773	Loxodonta_africana
ENSRBIG00000027777	TNRC6C	100	99.478	ENSMFAG00000043943	TNRC6C	100	99.478	Macaca_fascicularis
ENSRBIG00000027777	TNRC6C	100	99.478	ENSMMUG00000011924	TNRC6C	100	99.467	Macaca_mulatta
ENSRBIG00000027777	TNRC6C	100	99.408	ENSMNEG00000030405	TNRC6C	100	99.408	Macaca_nemestrina
ENSRBIG00000027777	TNRC6C	100	99.420	ENSMLEG00000033436	TNRC6C	100	99.420	Mandrillus_leucophaeus
ENSRBIG00000027777	TNRC6C	94	55.108	ENSMAMG00000023613	tnrc6c1	100	51.314	Mastacembelus_armatus
ENSRBIG00000027777	TNRC6C	100	48.806	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSRBIG00000027777	TNRC6C	100	80.126	ENSMGAG00000003906	TNRC6C	100	80.558	Meleagris_gallopavo
ENSRBIG00000027777	TNRC6C	100	89.452	ENSMAUG00000021618	Tnrc6c	100	89.393	Mesocricetus_auratus
ENSRBIG00000027777	TNRC6C	100	94.435	ENSMICG00000003952	TNRC6C	100	94.319	Microcebus_murinus
ENSRBIG00000027777	TNRC6C	100	91.711	ENSMOCG00000015879	Tnrc6c	100	89.232	Microtus_ochrogaster
ENSRBIG00000027777	TNRC6C	79	55.971	ENSMMOG00000005203	tnrc6c1	100	50.536	Mola_mola
ENSRBIG00000027777	TNRC6C	100	87.294	ENSMODG00000001785	TNRC6C	99	85.297	Monodelphis_domestica
ENSRBIG00000027777	TNRC6C	100	91.178	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.727	Mus_caroli
ENSRBIG00000027777	TNRC6C	100	90.941	ENSMUSG00000025571	Tnrc6c	100	88.503	Mus_musculus
ENSRBIG00000027777	TNRC6C	100	91.001	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.559	Mus_pahari
ENSRBIG00000027777	TNRC6C	100	91.001	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.559	Mus_spretus
ENSRBIG00000027777	TNRC6C	100	88.882	ENSMPUG00000013348	TNRC6C	97	88.472	Mustela_putorius_furo
ENSRBIG00000027777	TNRC6C	100	82.417	ENSMLUG00000014431	TNRC6C	97	81.846	Myotis_lucifugus
ENSRBIG00000027777	TNRC6C	100	90.689	ENSNGAG00000012203	Tnrc6c	99	89.086	Nannospalax_galili
ENSRBIG00000027777	TNRC6C	93	48.140	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSRBIG00000027777	TNRC6C	100	95.672	ENSNLEG00000000047	TNRC6C	99	95.944	Nomascus_leucogenys
ENSRBIG00000027777	TNRC6C	97	81.939	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSRBIG00000027777	TNRC6C	100	91.829	ENSODEG00000012499	TNRC6C	100	92.007	Octodon_degus
ENSRBIG00000027777	TNRC6C	94	51.399	ENSONIG00000002210	tnrc6c1	96	52.257	Oreochromis_niloticus
ENSRBIG00000027777	TNRC6C	99	63.689	ENSOANG00000009758	-	100	61.285	Ornithorhynchus_anatinus
ENSRBIG00000027777	TNRC6C	91	50.245	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSRBIG00000027777	TNRC6C	92	50.120	ENSORLG00020016510	tnrc6c1	100	49.279	Oryzias_latipes_hni
ENSRBIG00000027777	TNRC6C	72	45.227	ENSORLG00015000171	tnrc6c1	98	44.851	Oryzias_latipes_hsok
ENSRBIG00000027777	TNRC6C	92	51.050	ENSOMEG00000000357	tnrc6c1	99	48.292	Oryzias_melastigma
ENSRBIG00000027777	TNRC6C	100	93.101	ENSOGAG00000007197	TNRC6C	100	93.101	Otolemur_garnettii
ENSRBIG00000027777	TNRC6C	96	84.746	ENSOARG00000006041	TNRC6C	97	84.902	Ovis_aries
ENSRBIG00000027777	TNRC6C	100	98.899	ENSPPAG00000027160	TNRC6C	100	98.899	Pan_paniscus
ENSRBIG00000027777	TNRC6C	100	89.073	ENSPPRG00000018881	TNRC6C	100	89.014	Panthera_pardus
ENSRBIG00000027777	TNRC6C	90	86.026	ENSPTIG00000008791	TNRC6C	81	96.726	Panthera_tigris_altaica
ENSRBIG00000027777	TNRC6C	100	98.899	ENSPTRG00000009699	TNRC6C	100	98.899	Pan_troglodytes
ENSRBIG00000027777	TNRC6C	100	99.290	ENSPANG00000019994	TNRC6C	100	99.290	Papio_anubis
ENSRBIG00000027777	TNRC6C	96	52.840	ENSPKIG00000005428	tnrc6c1	100	51.745	Paramormyrops_kingsleyae
ENSRBIG00000027777	TNRC6C	100	86.576	ENSPSIG00000018069	TNRC6C	100	84.172	Pelodiscus_sinensis
ENSRBIG00000027777	TNRC6C	79	54.409	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSRBIG00000027777	TNRC6C	100	90.807	ENSPEMG00000009785	Tnrc6c	100	88.391	Peromyscus_maniculatus_bairdii
ENSRBIG00000027777	TNRC6C	58	86.154	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSRBIG00000027777	TNRC6C	100	48.947	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSRBIG00000027777	TNRC6C	100	50.000	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSRBIG00000027777	TNRC6C	100	99.130	ENSPPYG00000008679	TNRC6C	97	98.642	Pongo_abelii
ENSRBIG00000027777	TNRC6C	93	92.891	ENSPCAG00000012510	TNRC6C	91	92.891	Procavia_capensis
ENSRBIG00000027777	TNRC6C	100	94.899	ENSPCOG00000021451	TNRC6C	100	94.899	Propithecus_coquereli
ENSRBIG00000027777	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSRBIG00000027777	TNRC6C	100	47.640	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSRBIG00000027777	TNRC6C	100	90.242	ENSRNOG00000022395	Tnrc6c	100	90.302	Rattus_norvegicus
ENSRBIG00000027777	TNRC6C	100	99.948	ENSRROG00000042912	TNRC6C	100	99.948	Rhinopithecus_roxellana
ENSRBIG00000027777	TNRC6C	100	97.855	ENSSBOG00000023981	TNRC6C	100	97.855	Saimiri_boliviensis_boliviensis
ENSRBIG00000027777	TNRC6C	54	90.486	ENSSHAG00000018330	-	100	89.838	Sarcophilus_harrisii
ENSRBIG00000027777	TNRC6C	76	56.499	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSRBIG00000027777	TNRC6C	93	57.799	ENSSFOG00015006475	tnrc6c1	99	51.902	Scleropages_formosus
ENSRBIG00000027777	TNRC6C	100	49.002	ENSSMAG00000012761	tnrc6c1	99	50.603	Scophthalmus_maximus
ENSRBIG00000027777	TNRC6C	100	50.885	ENSSDUG00000002366	tnrc6c1	99	49.605	Seriola_dumerili
ENSRBIG00000027777	TNRC6C	100	49.112	ENSSLDG00000025613	tnrc6c1	100	50.222	Seriola_lalandi_dorsalis
ENSRBIG00000027777	TNRC6C	91	90.086	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSRBIG00000027777	TNRC6C	83	87.014	ENSSPUG00000007341	TNRC6C	98	87.083	Sphenodon_punctatus
ENSRBIG00000027777	TNRC6C	79	54.089	ENSSPAG00000014977	tnrc6c1	97	49.041	Stegastes_partitus
ENSRBIG00000027777	TNRC6C	97	90.951	ENSSSCG00000034373	TNRC6C	100	88.149	Sus_scrofa
ENSRBIG00000027777	TNRC6C	100	88.587	ENSTGUG00000007733	TNRC6C	100	86.130	Taeniopygia_guttata
ENSRBIG00000027777	TNRC6C	87	55.056	ENSTRUG00000011685	tnrc6c1	100	50.000	Takifugu_rubripes
ENSRBIG00000027777	TNRC6C	88	52.937	ENSTNIG00000005273	tnrc6c1	100	61.078	Tetraodon_nigroviridis
ENSRBIG00000027777	TNRC6C	67	82.146	ENSTBEG00000005046	TNRC6C	100	82.498	Tupaia_belangeri
ENSRBIG00000027777	TNRC6C	100	90.893	ENSTTRG00000010828	TNRC6C	97	90.952	Tursiops_truncatus
ENSRBIG00000027777	TNRC6C	100	89.234	ENSUMAG00000013614	TNRC6C	99	88.860	Ursus_maritimus
ENSRBIG00000027777	TNRC6C	52	81.207	ENSVPAG00000006765	-	99	81.214	Vicugna_pacos
ENSRBIG00000027777	TNRC6C	100	91.721	ENSVVUG00000015268	TNRC6C	100	91.721	Vulpes_vulpes
ENSRBIG00000027777	TNRC6C	100	75.206	ENSXETG00000019470	tnrc6c	100	74.501	Xenopus_tropicalis
ENSRBIG00000027777	TNRC6C	100	49.885	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus