EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000027782 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: TDRD11|p100
Full Name: staphylococcal nuclease domain-containing protein 1-like
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 258571 bases
Position: chrMCGX01003011.1:3213308-3471878
Accession: 108530765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000007827	SNase	PF00565.17	5e-45	1	3
ENSRBIP00000007827	SNase	PF00565.17	5e-45	2	3
ENSRBIP00000007827	SNase	PF00565.17	5e-45	3	3
ENSRBIP00000007833	SNase	PF00565.17	5.8e-45	1	3
ENSRBIP00000007833	SNase	PF00565.17	5.8e-45	2	3
ENSRBIP00000007833	SNase	PF00565.17	5.8e-45	3	3
ENSRBIP00000007823	SNase	PF00565.17	6.7e-45	1	3
ENSRBIP00000007823	SNase	PF00565.17	6.7e-45	2	3
ENSRBIP00000007823	SNase	PF00565.17	6.7e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000031430	-	1707	XM_017873813	ENSRBIP00000007827	568 (aa)	XP_017729302	A0A2K6K9B5
ENSRBIT00000031436	-	1770	-	ENSRBIP00000007833	589 (aa)	-	A0A2K6K989
ENSRBIT00000031426	-	1812	-	ENSRBIP00000007823	603 (aa)	-	A0A2K6K979

Gene Model

Click here to download ENSRBIG00000027782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000027782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000027782	-	93	99.810	ENSG00000197157	SND1	73	99.624	Homo_sapiens
ENSRBIG00000027782	-	93	87.879	ENSAPOG00000017599	snd1	69	87.879	Acanthochromis_polyacanthus
ENSRBIG00000027782	-	93	99.238	ENSAMEG00000004664	SND1	69	99.238	Ailuropoda_melanoleuca
ENSRBIG00000027782	-	93	83.302	ENSACIG00000003551	snd1	69	83.302	Amphilophus_citrinellus
ENSRBIG00000027782	-	93	87.689	ENSAOCG00000014166	snd1	69	87.689	Amphiprion_ocellaris
ENSRBIG00000027782	-	93	87.689	ENSAPEG00000007067	snd1	69	87.689	Amphiprion_percula
ENSRBIG00000027782	-	93	88.258	ENSATEG00000018475	snd1	63	88.258	Anabas_testudineus
ENSRBIG00000027782	-	93	99.430	ENSANAG00000034463	SND1	74	99.435	Aotus_nancymaae
ENSRBIG00000027782	-	93	87.121	ENSACLG00000022897	snd1	70	87.079	Astatotilapia_calliptera
ENSRBIG00000027782	-	93	88.113	ENSAMXG00000016318	snd1	74	88.060	Astyanax_mexicanus
ENSRBIG00000027782	-	93	98.859	ENSBTAG00000010692	SND1	73	98.684	Bos_taurus
ENSRBIG00000027782	-	93	51.220	WBGene00006626	tsn-1	75	51.487	Caenorhabditis_elegans
ENSRBIG00000027782	-	93	99.240	ENSCJAG00000017668	SND1	76	98.185	Callithrix_jacchus
ENSRBIG00000027782	-	93	99.620	ENSCAFG00000001700	SND1	73	99.436	Canis_familiaris
ENSRBIG00000027782	-	93	99.620	ENSCAFG00020021639	SND1	73	99.436	Canis_lupus_dingo
ENSRBIG00000027782	-	93	99.430	ENSCHIG00000023390	SND1	74	99.435	Capra_hircus
ENSRBIG00000027782	-	93	99.430	ENSTSYG00000004979	SND1	97	99.250	Carlito_syrichta
ENSRBIG00000027782	-	93	85.606	ENSCAPG00000010677	SND1	78	85.741	Cavia_aperea
ENSRBIG00000027782	-	93	99.240	ENSCPOG00000006251	SND1	73	99.060	Cavia_porcellus
ENSRBIG00000027782	-	93	99.620	ENSCCAG00000036847	SND1	75	97.989	Cebus_capucinus
ENSRBIG00000027782	-	93	99.810	ENSCATG00000035214	SND1	75	99.812	Cercocebus_atys
ENSRBIG00000027782	-	93	99.240	ENSCLAG00000011796	SND1	95	99.060	Chinchilla_lanigera
ENSRBIG00000027782	-	93	99.810	ENSCSAG00000010182	SND1	73	99.624	Chlorocebus_sabaeus
ENSRBIG00000027782	-	84	79.079	ENSCHOG00000002218	SND1	62	79.296	Choloepus_hoffmanni
ENSRBIG00000027782	-	93	95.057	ENSCPBG00000018094	SND1	73	94.925	Chrysemys_picta_bellii
ENSRBIG00000027782	-	93	62.082	ENSCING00000000524	-	71	62.132	Ciona_intestinalis
ENSRBIG00000027782	-	93	63.465	ENSCSAVG00000008807	-	71	63.501	Ciona_savignyi
ENSRBIG00000027782	-	95	99.825	ENSCANG00000035119	SND1	76	99.825	Colobus_angolensis_palliatus
ENSRBIG00000027782	-	93	97.909	ENSCGRG00001022514	Snd1	95	97.744	Cricetulus_griseus_chok1gshd
ENSRBIG00000027782	-	93	97.909	ENSCGRG00000012277	Snd1	75	97.928	Cricetulus_griseus_crigri
ENSRBIG00000027782	-	93	87.879	ENSCSEG00000008661	snd1	71	87.879	Cynoglossus_semilaevis
ENSRBIG00000027782	-	93	89.015	ENSCVAG00000010316	snd1	71	88.781	Cyprinodon_variegatus
ENSRBIG00000027782	-	93	88.868	ENSDARG00000006766	snd1	93	88.806	Danio_rerio
ENSRBIG00000027782	-	93	95.238	ENSDNOG00000006795	SND1	75	95.238	Dasypus_novemcinctus
ENSRBIG00000027782	-	93	99.240	ENSDORG00000000336	Snd1	73	99.060	Dipodomys_ordii
ENSRBIG00000027782	-	93	53.493	FBgn0035121	Tudor-SN	70	53.636	Drosophila_melanogaster
ENSRBIG00000027782	-	93	69.772	ENSETEG00000000375	SND1	72	69.680	Echinops_telfairi
ENSRBIG00000027782	-	90	66.967	ENSEBUG00000014201	-	85	74.731	Eptatretus_burgeri
ENSRBIG00000027782	-	93	99.430	ENSEASG00005008513	SND1	73	96.494	Equus_asinus_asinus
ENSRBIG00000027782	-	93	99.430	ENSECAG00000011451	SND1	72	99.248	Equus_caballus
ENSRBIG00000027782	-	93	96.958	ENSEEUG00000014737	SND1	62	96.958	Erinaceus_europaeus
ENSRBIG00000027782	-	93	85.660	ENSELUG00000001805	snd1	69	84.249	Esox_lucius
ENSRBIG00000027782	-	93	99.810	ENSFCAG00000008289	SND1	75	99.810	Felis_catus
ENSRBIG00000027782	-	93	99.430	ENSFDAG00000015881	SND1	73	99.060	Fukomys_damarensis
ENSRBIG00000027782	-	93	88.447	ENSFHEG00000004093	snd1	72	88.447	Fundulus_heteroclitus
ENSRBIG00000027782	-	51	95.833	ENSGALG00000052684	-	50	92.667	Gallus_gallus
ENSRBIG00000027782	-	93	88.636	ENSGAFG00000008421	snd1	72	88.577	Gambusia_affinis
ENSRBIG00000027782	-	93	38.175	ENSGACG00000019793	snd1	73	38.351	Gasterosteus_aculeatus
ENSRBIG00000027782	-	93	99.810	ENSGGOG00000009614	SND1	74	99.812	Gorilla_gorilla
ENSRBIG00000027782	-	93	87.121	ENSHBUG00000019135	snd1	70	87.079	Haplochromis_burtoni
ENSRBIG00000027782	-	93	98.859	ENSHGLG00000003618	SND1	93	98.684	Heterocephalus_glaber_female
ENSRBIG00000027782	-	93	98.859	ENSHGLG00100012449	SND1	73	98.859	Heterocephalus_glaber_male
ENSRBIG00000027782	-	93	88.068	ENSHCOG00000005266	snd1	72	87.085	Hippocampus_comes
ENSRBIG00000027782	-	93	87.547	ENSIPUG00000013279	snd1	71	87.547	Ictalurus_punctatus
ENSRBIG00000027782	-	93	99.240	ENSSTOG00000002140	SND1	73	99.060	Ictidomys_tridecemlineatus
ENSRBIG00000027782	-	93	99.240	ENSJJAG00000009561	Snd1	73	99.060	Jaculus_jaculus
ENSRBIG00000027782	-	93	88.636	ENSKMAG00000016997	snd1	70	88.577	Kryptolebias_marmoratus
ENSRBIG00000027782	-	93	86.932	ENSLBEG00000013563	snd1	73	86.891	Labrus_bergylta
ENSRBIG00000027782	-	93	86.940	ENSLOCG00000015537	snd1	73	86.900	Lepisosteus_oculatus
ENSRBIG00000027782	-	93	98.669	ENSLAFG00000009696	SND1	73	98.496	Loxodonta_africana
ENSRBIG00000027782	-	93	99.810	ENSMFAG00000038114	SND1	75	99.812	Macaca_fascicularis
ENSRBIG00000027782	-	93	99.810	ENSMMUG00000015432	SND1	93	99.624	Macaca_mulatta
ENSRBIG00000027782	-	93	99.810	ENSMNEG00000039808	SND1	97	99.812	Macaca_nemestrina
ENSRBIG00000027782	-	93	99.810	ENSMLEG00000029040	SND1	97	99.812	Mandrillus_leucophaeus
ENSRBIG00000027782	-	93	88.636	ENSMAMG00000011739	snd1	70	88.577	Mastacembelus_armatus
ENSRBIG00000027782	-	93	87.121	ENSMZEG00005005681	snd1	71	87.121	Maylandia_zebra
ENSRBIG00000027782	-	93	99.620	ENSMICG00000000097	SND1	73	99.436	Microcebus_murinus
ENSRBIG00000027782	-	93	98.669	ENSMOCG00000005040	Snd1	73	98.496	Microtus_ochrogaster
ENSRBIG00000027782	-	93	87.689	ENSMMOG00000001795	snd1	70	87.640	Mola_mola
ENSRBIG00000027782	-	93	95.247	ENSMODG00000015182	SND1	73	95.113	Monodelphis_domestica
ENSRBIG00000027782	-	93	87.311	ENSMALG00000012071	snd1	71	87.266	Monopterus_albus
ENSRBIG00000027782	-	93	98.289	MGP_CAROLIEiJ_G0028159	Snd1	95	98.120	Mus_caroli
ENSRBIG00000027782	-	93	97.909	ENSMUSG00000001424	Snd1	95	97.744	Mus_musculus
ENSRBIG00000027782	-	93	98.289	MGP_PahariEiJ_G0021917	Snd1	96	98.120	Mus_pahari
ENSRBIG00000027782	-	93	98.289	MGP_SPRETEiJ_G0029159	Snd1	95	98.120	Mus_spretus
ENSRBIG00000027782	-	93	99.430	ENSMPUG00000006545	SND1	76	95.691	Mustela_putorius_furo
ENSRBIG00000027782	-	93	99.048	ENSMLUG00000017130	SND1	71	99.057	Myotis_lucifugus
ENSRBIG00000027782	-	93	98.479	ENSNGAG00000011186	Snd1	73	98.308	Nannospalax_galili
ENSRBIG00000027782	-	93	87.121	ENSNBRG00000006681	snd1	70	87.079	Neolamprologus_brichardi
ENSRBIG00000027782	-	93	99.810	ENSNLEG00000012263	SND1	95	99.624	Nomascus_leucogenys
ENSRBIG00000027782	-	93	95.607	ENSOPRG00000013405	SND1	54	95.607	Ochotona_princeps
ENSRBIG00000027782	-	93	99.430	ENSODEG00000011502	SND1	73	99.248	Octodon_degus
ENSRBIG00000027782	-	93	87.121	ENSONIG00000011481	snd1	68	87.079	Oreochromis_niloticus
ENSRBIG00000027782	-	93	95.247	ENSOANG00000000817	SND1	73	95.292	Ornithorhynchus_anatinus
ENSRBIG00000027782	-	93	97.719	ENSOCUG00000001620	SND1	73	97.556	Oryctolagus_cuniculus
ENSRBIG00000027782	-	93	88.447	ENSORLG00000015201	snd1	71	88.447	Oryzias_latipes
ENSRBIG00000027782	-	93	88.447	ENSORLG00020013991	snd1	71	88.447	Oryzias_latipes_hni
ENSRBIG00000027782	-	93	88.447	ENSORLG00015012436	snd1	70	88.390	Oryzias_latipes_hsok
ENSRBIG00000027782	-	93	87.689	ENSOMEG00000006406	snd1	70	87.640	Oryzias_melastigma
ENSRBIG00000027782	-	93	99.429	ENSOGAG00000013356	SND1	69	99.429	Otolemur_garnettii
ENSRBIG00000027782	-	93	99.430	ENSOARG00000002149	SND1	75	99.248	Ovis_aries
ENSRBIG00000027782	-	93	99.810	ENSPPAG00000042947	SND1	74	99.812	Pan_paniscus
ENSRBIG00000027782	-	93	99.810	ENSPPRG00000004494	SND1	73	99.624	Panthera_pardus
ENSRBIG00000027782	-	93	99.810	ENSPTIG00000014214	SND1	73	99.810	Panthera_tigris_altaica
ENSRBIG00000027782	-	93	99.810	ENSPTRG00000023911	SND1	74	99.812	Pan_troglodytes
ENSRBIG00000027782	-	93	99.810	ENSPANG00000011997	SND1	75	99.812	Papio_anubis
ENSRBIG00000027782	-	93	85.981	ENSPKIG00000023494	snd1	71	85.952	Paramormyrops_kingsleyae
ENSRBIG00000027782	-	91	86.628	ENSPMGG00000003629	snd1	74	86.628	Periophthalmus_magnuspinnatus
ENSRBIG00000027782	-	93	98.669	ENSPEMG00000010240	Snd1	73	98.496	Peromyscus_maniculatus_bairdii
ENSRBIG00000027782	-	93	79.962	ENSPMAG00000007915	-	72	79.963	Petromyzon_marinus
ENSRBIG00000027782	-	93	95.817	ENSPCIG00000011561	SND1	73	95.677	Phascolarctos_cinereus
ENSRBIG00000027782	-	93	88.258	ENSPFOG00000001557	snd1	70	88.202	Poecilia_formosa
ENSRBIG00000027782	-	93	88.447	ENSPLAG00000018459	snd1	68	88.390	Poecilia_latipinna
ENSRBIG00000027782	-	93	88.826	ENSPMEG00000006803	snd1	70	88.764	Poecilia_mexicana
ENSRBIG00000027782	-	93	88.826	ENSPREG00000002189	snd1	71	88.764	Poecilia_reticulata
ENSRBIG00000027782	-	93	99.620	ENSPPYG00000017972	SND1	79	99.436	Pongo_abelii
ENSRBIG00000027782	-	93	87.029	ENSPCAG00000011305	SND1	68	87.029	Procavia_capensis
ENSRBIG00000027782	-	93	99.620	ENSPCOG00000026791	SND1	95	97.645	Propithecus_coquereli
ENSRBIG00000027782	-	93	96.008	ENSPVAG00000013945	SND1	76	92.101	Pteropus_vampyrus
ENSRBIG00000027782	-	93	87.121	ENSPNYG00000000932	snd1	70	87.079	Pundamilia_nyererei
ENSRBIG00000027782	-	93	87.925	ENSPNAG00000001206	snd1	71	87.925	Pygocentrus_nattereri
ENSRBIG00000027782	-	93	98.479	ENSRNOG00000031173	Snd1	75	97.338	Rattus_norvegicus
ENSRBIG00000027782	-	93	99.810	ENSRROG00000033020	SND1	76	96.991	Rhinopithecus_roxellana
ENSRBIG00000027782	-	93	99.620	ENSSBOG00000032461	SND1	96	97.468	Saimiri_boliviensis_boliviensis
ENSRBIG00000027782	-	93	91.255	ENSSHAG00000015359	SND1	75	91.337	Sarcophilus_harrisii
ENSRBIG00000027782	-	93	86.542	ENSSFOG00015001103	snd1	72	86.481	Scleropages_formosus
ENSRBIG00000027782	-	93	86.742	ENSSMAG00000001932	snd1	66	86.742	Scophthalmus_maximus
ENSRBIG00000027782	-	93	87.879	ENSSDUG00000002699	snd1	65	87.879	Seriola_dumerili
ENSRBIG00000027782	-	84	81.875	ENSSLDG00000001950	snd1	68	81.893	Seriola_lalandi_dorsalis
ENSRBIG00000027782	-	93	91.255	ENSSARG00000004877	SND1	78	91.337	Sorex_araneus
ENSRBIG00000027782	-	93	88.932	ENSSPUG00000017586	SND1	87	89.038	Sphenodon_punctatus
ENSRBIG00000027782	-	93	87.476	ENSSPAG00000021398	snd1	95	87.430	Stegastes_partitus
ENSRBIG00000027782	-	93	98.859	ENSSSCG00000016590	SND1	70	98.684	Sus_scrofa
ENSRBIG00000027782	-	93	89.300	ENSTRUG00000014067	snd1	70	87.453	Takifugu_rubripes
ENSRBIG00000027782	-	93	87.879	ENSTNIG00000011019	snd1	94	87.828	Tetraodon_nigroviridis
ENSRBIG00000027782	-	93	99.372	ENSTBEG00000003999	SND1	57	99.379	Tupaia_belangeri
ENSRBIG00000027782	-	93	91.825	ENSTTRG00000006059	SND1	76	88.151	Tursiops_truncatus
ENSRBIG00000027782	-	62	89.831	ENSUAMG00000002820	-	83	89.722	Ursus_americanus
ENSRBIG00000027782	-	83	99.422	ENSUAMG00000005604	-	54	99.422	Ursus_americanus
ENSRBIG00000027782	-	93	99.620	ENSUMAG00000005960	SND1	73	99.436	Ursus_maritimus
ENSRBIG00000027782	-	93	86.882	ENSVPAG00000008302	SND1	63	87.006	Vicugna_pacos
ENSRBIG00000027782	-	93	99.240	ENSVVUG00000007226	SND1	73	99.060	Vulpes_vulpes
ENSRBIG00000027782	-	93	91.255	ENSXETG00000023043	snd1	76	91.337	Xenopus_tropicalis
ENSRBIG00000027782	-	90	88.372	ENSXCOG00000013629	snd1	74	88.372	Xiphophorus_couchianus
ENSRBIG00000027782	-	93	88.636	ENSXMAG00000011469	snd1	70	88.577	Xiphophorus_maculatus