EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000028028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 46059 bases
Position: chrMCGX01000489.1:2388335-2434393
Accession: 108531232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000008291	PRP4	PF08799.11	1.5e-13	1	1
ENSRBIP00000008295	PRP4	PF08799.11	1.5e-13	1	1
ENSRBIP00000008329	PRP4	PF08799.11	1.6e-13	1	1
ENSRBIP00000008291	Prp18	PF02840.15	1.9e-62	1	1
ENSRBIP00000008329	Prp18	PF02840.15	2.3e-62	1	1
ENSRBIP00000008295	Prp18	PF02840.15	2.2e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000031898	-	2310	-	ENSRBIP00000008295	319 (aa)	-	A0A2K6KAH4
ENSRBIT00000031894	-	2379	XM_017874599	ENSRBIP00000008291	342 (aa)	XP_017730088	A0A2K6KAG5
ENSRBIT00000031932	-	1731	XM_017874591	ENSRBIP00000008329	351 (aa)	XP_017730080	A0A2K6KAN9

Gene Model

Click here to download ENSRBIG00000028028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000028028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000028028	-	100	99.415	ENSG00000165630	PRPF18	100	99.415	Homo_sapiens
ENSRBIG00000028028	-	100	85.965	ENSAPOG00000024177	prpf18	100	85.965	Acanthochromis_polyacanthus
ENSRBIG00000028028	-	100	98.830	ENSAMEG00000013591	-	100	98.830	Ailuropoda_melanoleuca
ENSRBIG00000028028	-	100	84.795	ENSACIG00000001186	prpf18	100	84.795	Amphilophus_citrinellus
ENSRBIG00000028028	-	98	85.970	ENSAOCG00000006572	prpf18	94	84.257	Amphiprion_ocellaris
ENSRBIG00000028028	-	100	86.257	ENSAPEG00000004564	prpf18	100	86.257	Amphiprion_percula
ENSRBIG00000028028	-	100	84.795	ENSATEG00000000303	prpf18	100	84.795	Anabas_testudineus
ENSRBIG00000028028	-	99	90.882	ENSAPLG00000003387	-	99	90.882	Anas_platyrhynchos
ENSRBIG00000028028	-	100	91.279	ENSACAG00000000818	-	100	91.279	Anolis_carolinensis
ENSRBIG00000028028	-	100	99.430	ENSANAG00000037445	-	100	99.430	Aotus_nancymaae
ENSRBIG00000028028	-	100	84.795	ENSACLG00000026296	prpf18	100	84.795	Astatotilapia_calliptera
ENSRBIG00000028028	-	100	84.900	ENSAMXG00000012848	prpf18	100	84.900	Astyanax_mexicanus
ENSRBIG00000028028	-	100	98.575	ENSBTAG00000017244	PRPF18	100	98.575	Bos_taurus
ENSRBIG00000028028	-	98	38.793	WBGene00009320	F32B6.3	97	38.793	Caenorhabditis_elegans
ENSRBIG00000028028	-	100	99.430	ENSCJAG00000009432	-	100	99.430	Callithrix_jacchus
ENSRBIG00000028028	-	100	98.830	ENSCAFG00000004735	-	100	98.830	Canis_familiaris
ENSRBIG00000028028	-	100	98.830	ENSCAFG00020007712	-	100	98.830	Canis_lupus_dingo
ENSRBIG00000028028	-	100	98.575	ENSCHIG00000000499	-	100	98.575	Capra_hircus
ENSRBIG00000028028	-	100	98.575	ENSTSYG00000003517	-	100	98.575	Carlito_syrichta
ENSRBIG00000028028	-	100	99.415	ENSCPOG00000021069	-	100	99.415	Cavia_porcellus
ENSRBIG00000028028	-	100	99.430	ENSCCAG00000036822	-	100	99.430	Cebus_capucinus
ENSRBIG00000028028	-	100	88.304	ENSCATG00000016633	-	100	88.304	Cercocebus_atys
ENSRBIG00000028028	-	100	98.538	ENSCLAG00000011770	-	100	98.538	Chinchilla_lanigera
ENSRBIG00000028028	-	100	99.430	ENSCSAG00000013109	-	100	99.430	Chlorocebus_sabaeus
ENSRBIG00000028028	-	100	88.764	ENSCPBG00000003100	-	100	89.326	Chrysemys_picta_bellii
ENSRBIG00000028028	-	99	55.000	ENSCING00000020481	-	97	55.000	Ciona_intestinalis
ENSRBIG00000028028	-	99	54.624	ENSCSAVG00000010546	-	99	54.651	Ciona_savignyi
ENSRBIG00000028028	-	100	99.715	ENSCANG00000034900	-	100	99.715	Colobus_angolensis_palliatus
ENSRBIG00000028028	-	100	98.830	ENSCGRG00001023665	Prpf18	100	98.830	Cricetulus_griseus_chok1gshd
ENSRBIG00000028028	-	100	98.830	ENSCGRG00000014690	Prpf18	100	98.830	Cricetulus_griseus_crigri
ENSRBIG00000028028	-	100	83.591	ENSCSEG00000005536	prpf18	100	83.591	Cynoglossus_semilaevis
ENSRBIG00000028028	-	100	84.795	ENSCVAG00000012401	prpf18	100	84.795	Cyprinodon_variegatus
ENSRBIG00000028028	-	100	84.795	ENSDARG00000058306	prpf18	100	84.795	Danio_rerio
ENSRBIG00000028028	-	100	98.246	ENSDNOG00000035607	-	100	98.246	Dasypus_novemcinctus
ENSRBIG00000028028	-	100	98.538	ENSDORG00000000858	Prpf18	100	98.538	Dipodomys_ordii
ENSRBIG00000028028	-	99	51.917	FBgn0027784	Prp18	98	51.622	Drosophila_melanogaster
ENSRBIG00000028028	-	100	87.427	ENSETEG00000015060	-	100	87.427	Echinops_telfairi
ENSRBIG00000028028	-	100	66.282	ENSEBUG00000016502	prpf18	99	65.418	Eptatretus_burgeri
ENSRBIG00000028028	-	100	99.145	ENSEASG00005019373	-	100	99.145	Equus_asinus_asinus
ENSRBIG00000028028	-	100	99.145	ENSECAG00000006997	PRPF18	100	99.145	Equus_caballus
ENSRBIG00000028028	-	70	100.000	ENSEEUG00000001171	-	71	100.000	Erinaceus_europaeus
ENSRBIG00000028028	-	100	82.799	ENSELUG00000022190	prpf18	100	82.799	Esox_lucius
ENSRBIG00000028028	-	100	98.575	ENSFCAG00000004436	-	100	98.575	Felis_catus
ENSRBIG00000028028	-	93	90.769	ENSFALG00000001912	-	97	90.769	Ficedula_albicollis
ENSRBIG00000028028	-	99	64.928	ENSFDAG00000010713	-	97	64.928	Fukomys_damarensis
ENSRBIG00000028028	-	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSRBIG00000028028	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSRBIG00000028028	-	99	80.352	ENSGMOG00000012210	prpf18	99	80.352	Gadus_morhua
ENSRBIG00000028028	-	100	91.813	ENSGALG00000043593	-	100	91.813	Gallus_gallus
ENSRBIG00000028028	-	100	83.626	ENSGAFG00000006034	prpf18	100	83.626	Gambusia_affinis
ENSRBIG00000028028	-	100	82.164	ENSGACG00000012232	prpf18	100	82.164	Gasterosteus_aculeatus
ENSRBIG00000028028	-	100	92.105	ENSGAGG00000016878	-	100	92.105	Gopherus_agassizii
ENSRBIG00000028028	-	93	99.385	ENSGGOG00000025188	-	96	99.385	Gorilla_gorilla
ENSRBIG00000028028	-	100	84.795	ENSHBUG00000010264	prpf18	100	84.795	Haplochromis_burtoni
ENSRBIG00000028028	-	100	98.830	ENSHGLG00000018534	PRPF18	100	98.830	Heterocephalus_glaber_female
ENSRBIG00000028028	-	94	99.062	ENSHGLG00100012161	-	98	99.062	Heterocephalus_glaber_male
ENSRBIG00000028028	-	100	84.795	ENSHCOG00000015987	prpf18	100	84.795	Hippocampus_comes
ENSRBIG00000028028	-	100	82.436	ENSIPUG00000007432	prpf18	100	83.286	Ictalurus_punctatus
ENSRBIG00000028028	-	100	97.661	ENSSTOG00000008735	-	100	97.661	Ictidomys_tridecemlineatus
ENSRBIG00000028028	-	100	77.160	ENSJJAG00000015191	-	100	77.160	Jaculus_jaculus
ENSRBIG00000028028	-	100	99.415	ENSJJAG00000024041	-	100	99.415	Jaculus_jaculus
ENSRBIG00000028028	-	100	84.375	ENSKMAG00000012124	prpf18	100	84.375	Kryptolebias_marmoratus
ENSRBIG00000028028	-	99	84.024	ENSLBEG00000028466	prpf18	99	84.024	Labrus_bergylta
ENSRBIG00000028028	-	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSRBIG00000028028	-	100	90.643	ENSLOCG00000016736	prpf18	100	90.643	Lepisosteus_oculatus
ENSRBIG00000028028	-	100	99.415	ENSLAFG00000007753	-	100	99.415	Loxodonta_africana
ENSRBIG00000028028	-	100	99.430	ENSMFAG00000000540	-	100	99.430	Macaca_fascicularis
ENSRBIG00000028028	-	100	99.430	ENSMMUG00000015071	PRPF18	100	99.430	Macaca_mulatta
ENSRBIG00000028028	-	100	99.430	ENSMNEG00000024679	-	100	99.430	Macaca_nemestrina
ENSRBIG00000028028	-	100	84.211	ENSMLEG00000031715	-	100	84.211	Mandrillus_leucophaeus
ENSRBIG00000028028	-	100	83.918	ENSMAMG00000006610	prpf18	100	83.918	Mastacembelus_armatus
ENSRBIG00000028028	-	100	84.795	ENSMZEG00005019392	prpf18	100	84.795	Maylandia_zebra
ENSRBIG00000028028	-	100	91.813	ENSMGAG00000005023	-	100	91.813	Meleagris_gallopavo
ENSRBIG00000028028	-	100	99.715	ENSMICG00000006572	-	100	99.715	Microcebus_murinus
ENSRBIG00000028028	-	100	99.415	ENSMOCG00000021468	Prpf18	100	99.415	Microtus_ochrogaster
ENSRBIG00000028028	-	100	83.626	ENSMMOG00000013012	prpf18	100	83.626	Mola_mola
ENSRBIG00000028028	-	96	92.604	ENSMODG00000016902	-	92	92.604	Monodelphis_domestica
ENSRBIG00000028028	-	100	85.673	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSRBIG00000028028	-	100	78.286	ENSMALG00000005486	prpf18	100	78.571	Monopterus_albus
ENSRBIG00000028028	-	100	98.830	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSRBIG00000028028	-	100	98.538	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSRBIG00000028028	-	100	99.123	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSRBIG00000028028	-	100	98.246	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSRBIG00000028028	-	100	98.538	ENSMPUG00000000938	-	100	98.538	Mustela_putorius_furo
ENSRBIG00000028028	-	100	98.538	ENSMLUG00000009200	-	100	98.538	Myotis_lucifugus
ENSRBIG00000028028	-	100	98.830	ENSNGAG00000012500	-	100	98.830	Nannospalax_galili
ENSRBIG00000028028	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSRBIG00000028028	-	100	84.795	ENSNBRG00000001778	prpf18	100	84.795	Neolamprologus_brichardi
ENSRBIG00000028028	-	100	99.430	ENSNLEG00000012186	-	100	99.430	Nomascus_leucogenys
ENSRBIG00000028028	-	100	61.721	ENSMEUG00000005032	-	100	65.205	Notamacropus_eugenii
ENSRBIG00000028028	-	77	81.132	ENSOPRG00000002153	-	100	81.132	Ochotona_princeps
ENSRBIG00000028028	-	100	98.538	ENSODEG00000003770	-	100	98.538	Octodon_degus
ENSRBIG00000028028	-	98	84.179	ENSONIG00000014854	prpf18	96	84.179	Oreochromis_niloticus
ENSRBIG00000028028	-	100	94.152	ENSOANG00000015404	-	100	94.152	Ornithorhynchus_anatinus
ENSRBIG00000028028	-	100	99.123	ENSOCUG00000027756	-	100	95.029	Oryctolagus_cuniculus
ENSRBIG00000028028	-	100	82.621	ENSORLG00000010293	prpf18	100	82.621	Oryzias_latipes
ENSRBIG00000028028	-	100	85.625	ENSORLG00020001530	prpf18	100	85.625	Oryzias_latipes_hni
ENSRBIG00000028028	-	100	83.918	ENSORLG00015013705	prpf18	100	83.918	Oryzias_latipes_hsok
ENSRBIG00000028028	-	100	85.380	ENSOMEG00000009167	prpf18	100	85.380	Oryzias_melastigma
ENSRBIG00000028028	-	100	98.246	ENSOGAG00000007294	-	100	98.246	Otolemur_garnettii
ENSRBIG00000028028	-	100	98.575	ENSOARG00000006243	-	100	98.575	Ovis_aries
ENSRBIG00000028028	-	100	99.430	ENSPPAG00000041959	-	100	99.430	Pan_paniscus
ENSRBIG00000028028	-	100	98.538	ENSPPRG00000000107	-	100	98.538	Panthera_pardus
ENSRBIG00000028028	-	100	98.246	ENSPTIG00000021094	-	100	98.246	Panthera_tigris_altaica
ENSRBIG00000028028	-	100	99.430	ENSPTRG00000002306	PRPF18	100	99.430	Pan_troglodytes
ENSRBIG00000028028	-	100	99.145	ENSPANG00000023346	-	100	99.145	Papio_anubis
ENSRBIG00000028028	-	86	98.113	ENSPKIG00000014128	prpf18	96	83.761	Paramormyrops_kingsleyae
ENSRBIG00000028028	-	100	92.398	ENSPSIG00000016064	-	100	92.398	Pelodiscus_sinensis
ENSRBIG00000028028	-	100	83.333	ENSPMGG00000016486	prpf18	100	83.333	Periophthalmus_magnuspinnatus
ENSRBIG00000028028	-	100	99.123	ENSPEMG00000013704	Prpf18	100	99.123	Peromyscus_maniculatus_bairdii
ENSRBIG00000028028	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSRBIG00000028028	-	93	96.000	ENSPCIG00000012963	-	99	96.203	Phascolarctos_cinereus
ENSRBIG00000028028	-	100	82.336	ENSPFOG00000017611	prpf18	100	82.336	Poecilia_formosa
ENSRBIG00000028028	-	100	83.918	ENSPLAG00000000369	prpf18	100	83.918	Poecilia_latipinna
ENSRBIG00000028028	-	100	83.918	ENSPMEG00000005183	prpf18	100	83.918	Poecilia_mexicana
ENSRBIG00000028028	-	100	83.333	ENSPREG00000015232	prpf18	100	83.333	Poecilia_reticulata
ENSRBIG00000028028	-	100	99.123	ENSPPYG00000002101	PRPF18	100	99.123	Pongo_abelii
ENSRBIG00000028028	-	100	80.409	ENSPCAG00000010833	-	100	80.409	Procavia_capensis
ENSRBIG00000028028	-	100	92.105	ENSPCOG00000013057	-	100	92.105	Propithecus_coquereli
ENSRBIG00000028028	-	100	61.111	ENSPVAG00000002947	-	100	61.111	Pteropus_vampyrus
ENSRBIG00000028028	-	100	84.795	ENSPNYG00000003554	prpf18	100	84.795	Pundamilia_nyererei
ENSRBIG00000028028	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSRBIG00000028028	-	100	98.538	ENSRNOG00000018396	Prpf18	100	98.538	Rattus_norvegicus
ENSRBIG00000028028	-	100	99.715	ENSRROG00000040695	-	100	99.715	Rhinopithecus_roxellana
ENSRBIG00000028028	-	100	99.430	ENSSBOG00000034482	-	100	99.430	Saimiri_boliviensis_boliviensis
ENSRBIG00000028028	-	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSRBIG00000028028	-	100	96.199	ENSSHAG00000016463	-	100	96.199	Sarcophilus_harrisii
ENSRBIG00000028028	-	100	82.407	ENSSFOG00015022118	prpf18	100	82.407	Scleropages_formosus
ENSRBIG00000028028	-	76	47.934	ENSSFOG00015021154	-	89	51.905	Scleropages_formosus
ENSRBIG00000028028	-	100	83.626	ENSSMAG00000005308	prpf18	100	83.626	Scophthalmus_maximus
ENSRBIG00000028028	-	100	85.673	ENSSDUG00000015428	prpf18	100	85.673	Seriola_dumerili
ENSRBIG00000028028	-	100	85.673	ENSSLDG00000023989	prpf18	100	85.673	Seriola_lalandi_dorsalis
ENSRBIG00000028028	-	100	68.421	ENSSARG00000005307	-	100	68.421	Sorex_araneus
ENSRBIG00000028028	-	100	92.398	ENSSPUG00000002619	-	100	92.398	Sphenodon_punctatus
ENSRBIG00000028028	-	100	85.088	ENSSPAG00000019502	prpf18	100	85.088	Stegastes_partitus
ENSRBIG00000028028	-	100	98.860	ENSSSCG00000026354	-	100	98.860	Sus_scrofa
ENSRBIG00000028028	-	100	91.813	ENSTGUG00000002286	-	100	91.813	Taeniopygia_guttata
ENSRBIG00000028028	-	100	82.749	ENSTRUG00000011278	prpf18	100	82.749	Takifugu_rubripes
ENSRBIG00000028028	-	100	82.456	ENSTNIG00000000911	prpf18	100	82.456	Tetraodon_nigroviridis
ENSRBIG00000028028	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSRBIG00000028028	-	100	99.123	ENSTTRG00000011117	PRPF18	100	99.123	Tursiops_truncatus
ENSRBIG00000028028	-	95	96.000	ENSUAMG00000001815	-	94	96.000	Ursus_americanus
ENSRBIG00000028028	-	100	93.860	ENSUMAG00000012329	-	100	93.860	Ursus_maritimus
ENSRBIG00000028028	-	100	93.275	ENSVPAG00000011486	-	100	93.275	Vicugna_pacos
ENSRBIG00000028028	-	100	98.860	ENSVVUG00000005453	-	100	98.860	Vulpes_vulpes
ENSRBIG00000028028	-	100	80.000	ENSXETG00000024057	prpf18	100	80.000	Xenopus_tropicalis
ENSRBIG00000028028	-	100	83.140	ENSXCOG00000020414	prpf18	100	83.140	Xiphophorus_couchianus
ENSRBIG00000028028	-	100	83.626	ENSXMAG00000004713	prpf18	91	83.626	Xiphophorus_maculatus