EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000028279 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 28511 bases
Position: chrMCGX01009064.1:31755-60265
Accession: 108544221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000009139	YTH	PF04146.15	9.5e-40	1	1
ENSRBIP00000009069	YTH	PF04146.15	1.6e-39	1	1
ENSRBIP00000009091	YTH	PF04146.15	1.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000032681	YTHDC1-201	2187	XM_017895260	ENSRBIP00000009069	728 (aa)	XP_017750749	A0A2K6KCS5
ENSRBIT00000032752	YTHDC1-203	1614	-	ENSRBIP00000009139	537 (aa)	-	A0A2K6KD03
ENSRBIT00000032704	YTHDC1-202	2031	-	ENSRBIP00000009091	676 (aa)	-	A0A2K6KCS3

Gene Model

Click here to download ENSRBIG00000028279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000028279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000028279	YTHDC1	99	98.487	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSRBIG00000028279	YTHDC1	54	54.756	ENSAPOG00000013997	ythdc1	57	62.118	Acanthochromis_polyacanthus
ENSRBIG00000028279	YTHDC1	99	95.342	ENSAMEG00000005688	YTHDC1	99	95.342	Ailuropoda_melanoleuca
ENSRBIG00000028279	YTHDC1	78	62.614	ENSACIG00000019728	ythdc1	78	59.434	Amphilophus_citrinellus
ENSRBIG00000028279	YTHDC1	58	60.860	ENSAOCG00000000239	ythdc1	59	65.843	Amphiprion_ocellaris
ENSRBIG00000028279	YTHDC1	50	65.041	ENSAPEG00000000618	ythdc1	53	67.196	Amphiprion_percula
ENSRBIG00000028279	YTHDC1	96	81.346	ENSAPLG00000009921	YTHDC1	92	83.507	Anas_platyrhynchos
ENSRBIG00000028279	YTHDC1	96	80.077	ENSACAG00000009697	YTHDC1	91	81.454	Anolis_carolinensis
ENSRBIG00000028279	YTHDC1	100	97.811	ENSANAG00000001522	YTHDC1	100	97.811	Aotus_nancymaae
ENSRBIG00000028279	YTHDC1	92	53.229	ENSACLG00000019371	ythdc1	59	65.463	Astatotilapia_calliptera
ENSRBIG00000028279	YTHDC1	96	61.321	ENSAMXG00000006978	ythdc1	91	64.731	Astyanax_mexicanus
ENSRBIG00000028279	YTHDC1	99	95.192	ENSBTAG00000015572	YTHDC1	99	95.192	Bos_taurus
ENSRBIG00000028279	YTHDC1	99	97.387	ENSCJAG00000009934	YTHDC1	99	97.387	Callithrix_jacchus
ENSRBIG00000028279	YTHDC1	99	95.342	ENSCAFG00000002821	YTHDC1	99	95.342	Canis_familiaris
ENSRBIG00000028279	YTHDC1	99	95.342	ENSCAFG00020027112	YTHDC1	99	95.342	Canis_lupus_dingo
ENSRBIG00000028279	YTHDC1	99	93.878	ENSCHIG00000004810	YTHDC1	98	93.878	Capra_hircus
ENSRBIG00000028279	YTHDC1	99	96.699	ENSTSYG00000011668	YTHDC1	99	96.699	Carlito_syrichta
ENSRBIG00000028279	YTHDC1	98	71.563	ENSCAPG00000008722	YTHDC1	91	67.496	Cavia_aperea
ENSRBIG00000028279	YTHDC1	96	93.714	ENSCPOG00000010929	YTHDC1	91	86.776	Cavia_porcellus
ENSRBIG00000028279	YTHDC1	99	97.257	ENSCCAG00000035754	YTHDC1	99	97.257	Cebus_capucinus
ENSRBIG00000028279	YTHDC1	99	98.762	ENSCATG00000036320	YTHDC1	100	98.321	Cercocebus_atys
ENSRBIG00000028279	YTHDC1	99	96.694	ENSCLAG00000005482	YTHDC1	99	96.694	Chinchilla_lanigera
ENSRBIG00000028279	YTHDC1	99	97.524	ENSCSAG00000005252	YTHDC1	99	97.524	Chlorocebus_sabaeus
ENSRBIG00000028279	YTHDC1	97	83.238	ENSCPBG00000021965	YTHDC1	94	84.932	Chrysemys_picta_bellii
ENSRBIG00000028279	YTHDC1	100	98.906	ENSCANG00000004769	YTHDC1	100	98.906	Colobus_angolensis_palliatus
ENSRBIG00000028279	YTHDC1	99	96.149	ENSCGRG00001000816	Ythdc1	99	96.149	Cricetulus_griseus_chok1gshd
ENSRBIG00000028279	YTHDC1	99	95.048	ENSCGRG00000009807	Ythdc1	99	95.048	Cricetulus_griseus_crigri
ENSRBIG00000028279	YTHDC1	58	59.783	ENSCSEG00000020404	ythdc1	59	65.541	Cynoglossus_semilaevis
ENSRBIG00000028279	YTHDC1	50	68.015	ENSCVAG00000022349	ythdc1	59	64.480	Cyprinodon_variegatus
ENSRBIG00000028279	YTHDC1	96	58.891	ENSDARG00000051953	ythdc1	58	76.798	Danio_rerio
ENSRBIG00000028279	YTHDC1	99	94.505	ENSDNOG00000004949	YTHDC1	99	94.505	Dasypus_novemcinctus
ENSRBIG00000028279	YTHDC1	99	97.662	ENSDORG00000013045	Ythdc1	99	97.662	Dipodomys_ordii
ENSRBIG00000028279	YTHDC1	78	98.718	ENSETEG00000001878	YTHDC1	77	98.718	Echinops_telfairi
ENSRBIG00000028279	YTHDC1	99	95.890	ENSEASG00005018383	YTHDC1	100	96.512	Equus_asinus_asinus
ENSRBIG00000028279	YTHDC1	99	95.479	ENSECAG00000018303	YTHDC1	100	96.076	Equus_caballus
ENSRBIG00000028279	YTHDC1	99	94.643	ENSEEUG00000015466	YTHDC1	99	94.643	Erinaceus_europaeus
ENSRBIG00000028279	YTHDC1	95	59.733	ENSELUG00000014029	ythdc1	57	75.121	Esox_lucius
ENSRBIG00000028279	YTHDC1	99	95.199	ENSFCAG00000026791	YTHDC1	99	95.199	Felis_catus
ENSRBIG00000028279	YTHDC1	68	87.387	ENSFALG00000006581	YTHDC1	85	91.408	Ficedula_albicollis
ENSRBIG00000028279	YTHDC1	99	95.592	ENSFDAG00000018560	YTHDC1	100	95.592	Fukomys_damarensis
ENSRBIG00000028279	YTHDC1	63	64.643	ENSGMOG00000018815	ythdc1	73	65.882	Gadus_morhua
ENSRBIG00000028279	YTHDC1	99	83.209	ENSGALG00000035906	YTHDC1	90	83.396	Gallus_gallus
ENSRBIG00000028279	YTHDC1	67	66.544	ENSGAFG00000001759	ythdc1	56	66.436	Gambusia_affinis
ENSRBIG00000028279	YTHDC1	58	62.617	ENSGACG00000015486	ythdc1	57	62.731	Gasterosteus_aculeatus
ENSRBIG00000028279	YTHDC1	96	83.846	ENSGAGG00000007108	YTHDC1	91	86.033	Gopherus_agassizii
ENSRBIG00000028279	YTHDC1	99	98.760	ENSGGOG00000021958	YTHDC1	99	98.760	Gorilla_gorilla
ENSRBIG00000028279	YTHDC1	92	53.425	ENSHBUG00000019288	ythdc1	59	65.463	Haplochromis_burtoni
ENSRBIG00000028279	YTHDC1	99	92.710	ENSHGLG00000006319	-	99	92.710	Heterocephalus_glaber_female
ENSRBIG00000028279	YTHDC1	96	70.656	ENSHGLG00000003239	-	68	72.780	Heterocephalus_glaber_female
ENSRBIG00000028279	YTHDC1	99	94.254	ENSHGLG00100001556	-	99	94.254	Heterocephalus_glaber_male
ENSRBIG00000028279	YTHDC1	96	68.714	ENSHGLG00100008060	-	68	70.825	Heterocephalus_glaber_male
ENSRBIG00000028279	YTHDC1	58	63.158	ENSHCOG00000001520	ythdc1	83	63.158	Hippocampus_comes
ENSRBIG00000028279	YTHDC1	96	63.048	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSRBIG00000028279	YTHDC1	99	97.937	ENSSTOG00000013652	YTHDC1	99	97.937	Ictidomys_tridecemlineatus
ENSRBIG00000028279	YTHDC1	96	91.923	ENSJJAG00000010268	Ythdc1	93	92.125	Jaculus_jaculus
ENSRBIG00000028279	YTHDC1	58	59.685	ENSKMAG00000006483	ythdc1	85	64.653	Kryptolebias_marmoratus
ENSRBIG00000028279	YTHDC1	62	69.697	ENSLBEG00000020831	ythdc1	71	69.697	Labrus_bergylta
ENSRBIG00000028279	YTHDC1	88	72.755	ENSLACG00000004893	YTHDC1	92	72.685	Latimeria_chalumnae
ENSRBIG00000028279	YTHDC1	92	72.485	ENSLOCG00000003045	ythdc1	91	86.792	Lepisosteus_oculatus
ENSRBIG00000028279	YTHDC1	96	94.808	ENSLAFG00000021592	YTHDC1	91	94.948	Loxodonta_africana
ENSRBIG00000028279	YTHDC1	100	98.906	ENSMFAG00000031927	YTHDC1	100	98.906	Macaca_fascicularis
ENSRBIG00000028279	YTHDC1	99	98.898	ENSMMUG00000002265	YTHDC1	99	98.898	Macaca_mulatta
ENSRBIG00000028279	YTHDC1	100	98.906	ENSMNEG00000033751	YTHDC1	100	98.906	Macaca_nemestrina
ENSRBIG00000028279	YTHDC1	100	98.906	ENSMLEG00000042147	YTHDC1	100	98.906	Mandrillus_leucophaeus
ENSRBIG00000028279	YTHDC1	54	55.637	ENSMAMG00000013122	ythdc1	58	65.471	Mastacembelus_armatus
ENSRBIG00000028279	YTHDC1	92	53.229	ENSMZEG00005023173	ythdc1	59	65.463	Maylandia_zebra
ENSRBIG00000028279	YTHDC1	96	79.846	ENSMGAG00000010391	YTHDC1	91	83.680	Meleagris_gallopavo
ENSRBIG00000028279	YTHDC1	99	95.873	ENSMAUG00000001286	Ythdc1	99	95.873	Mesocricetus_auratus
ENSRBIG00000028279	YTHDC1	99	97.115	ENSMICG00000034640	YTHDC1	99	97.115	Microcebus_murinus
ENSRBIG00000028279	YTHDC1	99	96.149	ENSMOCG00000020201	Ythdc1	99	96.149	Microtus_ochrogaster
ENSRBIG00000028279	YTHDC1	65	56.695	ENSMODG00000009173	-	88	60.190	Monodelphis_domestica
ENSRBIG00000028279	YTHDC1	94	51.830	ENSMODG00000010076	-	72	51.479	Monodelphis_domestica
ENSRBIG00000028279	YTHDC1	96	85.962	ENSMODG00000020754	-	91	86.181	Monodelphis_domestica
ENSRBIG00000028279	YTHDC1	85	73.818	ENSMODG00000014337	-	94	68.496	Monodelphis_domestica
ENSRBIG00000028279	YTHDC1	57	65.306	ENSMALG00000013412	ythdc1	56	67.287	Monopterus_albus
ENSRBIG00000028279	YTHDC1	99	92.066	MGP_CAROLIEiJ_G0027347	Ythdc1	96	92.251	Mus_caroli
ENSRBIG00000028279	YTHDC1	99	94.780	ENSMUSG00000035851	Ythdc1	99	94.780	Mus_musculus
ENSRBIG00000028279	YTHDC1	99	96.154	MGP_PahariEiJ_G0017126	Ythdc1	99	96.154	Mus_pahari
ENSRBIG00000028279	YTHDC1	99	95.055	MGP_SPRETEiJ_G0028339	Ythdc1	99	95.055	Mus_spretus
ENSRBIG00000028279	YTHDC1	92	70.631	ENSMPUG00000001743	YTHDC1	53	95.908	Mustela_putorius_furo
ENSRBIG00000028279	YTHDC1	99	95.179	ENSMLUG00000016300	YTHDC1	100	95.179	Myotis_lucifugus
ENSRBIG00000028279	YTHDC1	81	86.230	ENSNGAG00000024000	Ythdc1	93	87.016	Nannospalax_galili
ENSRBIG00000028279	YTHDC1	60	63.950	ENSNBRG00000007663	ythdc1	70	65.668	Neolamprologus_brichardi
ENSRBIG00000028279	YTHDC1	100	98.085	ENSNLEG00000009202	YTHDC1	100	98.085	Nomascus_leucogenys
ENSRBIG00000028279	YTHDC1	74	81.940	ENSMEUG00000007128	YTHDC1	68	81.940	Notamacropus_eugenii
ENSRBIG00000028279	YTHDC1	79	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSRBIG00000028279	YTHDC1	99	94.911	ENSODEG00000001715	YTHDC1	99	94.911	Octodon_degus
ENSRBIG00000028279	YTHDC1	92	53.620	ENSONIG00000012651	ythdc1	63	69.697	Oreochromis_niloticus
ENSRBIG00000028279	YTHDC1	89	76.723	ENSOANG00000014398	YTHDC1	78	83.038	Ornithorhynchus_anatinus
ENSRBIG00000028279	YTHDC1	92	79.586	ENSOCUG00000015886	YTHDC1	57	93.350	Oryctolagus_cuniculus
ENSRBIG00000028279	YTHDC1	54	56.511	ENSOMEG00000000551	ythdc1	72	53.271	Oryzias_melastigma
ENSRBIG00000028279	YTHDC1	99	95.461	ENSOGAG00000003362	YTHDC1	99	95.461	Otolemur_garnettii
ENSRBIG00000028279	YTHDC1	99	95.192	ENSOARG00000008633	YTHDC1	99	95.192	Ovis_aries
ENSRBIG00000028279	YTHDC1	99	98.623	ENSPPAG00000041315	YTHDC1	99	98.623	Pan_paniscus
ENSRBIG00000028279	YTHDC1	99	96.433	ENSPPRG00000011979	YTHDC1	99	96.433	Panthera_pardus
ENSRBIG00000028279	YTHDC1	99	92.720	ENSPTIG00000015527	YTHDC1	100	92.720	Panthera_tigris_altaica
ENSRBIG00000028279	YTHDC1	99	98.623	ENSPTRG00000016105	YTHDC1	99	98.623	Pan_troglodytes
ENSRBIG00000028279	YTHDC1	100	98.231	ENSPANG00000021590	YTHDC1	100	98.231	Papio_anubis
ENSRBIG00000028279	YTHDC1	96	66.858	ENSPKIG00000018497	ythdc1	91	67.638	Paramormyrops_kingsleyae
ENSRBIG00000028279	YTHDC1	96	83.493	ENSPSIG00000002782	YTHDC1	92	84.570	Pelodiscus_sinensis
ENSRBIG00000028279	YTHDC1	99	96.561	ENSPEMG00000013850	Ythdc1	99	96.561	Peromyscus_maniculatus_bairdii
ENSRBIG00000028279	YTHDC1	96	85.769	ENSPCIG00000006870	YTHDC1	91	86.033	Phascolarctos_cinereus
ENSRBIG00000028279	YTHDC1	58	58.744	ENSPLAG00000011079	ythdc1	85	63.883	Poecilia_latipinna
ENSRBIG00000028279	YTHDC1	70	58.865	ENSPREG00000016973	ythdc1	76	51.145	Poecilia_reticulata
ENSRBIG00000028279	YTHDC1	88	97.969	ENSPPYG00000014726	YTHDC1	100	97.969	Pongo_abelii
ENSRBIG00000028279	YTHDC1	76	100.000	ENSPCAG00000009607	YTHDC1	73	89.091	Procavia_capensis
ENSRBIG00000028279	YTHDC1	99	95.858	ENSPCOG00000019105	YTHDC1	99	95.858	Propithecus_coquereli
ENSRBIG00000028279	YTHDC1	99	87.828	ENSPVAG00000015551	YTHDC1	99	87.828	Pteropus_vampyrus
ENSRBIG00000028279	YTHDC1	92	53.229	ENSPNYG00000011687	ythdc1	59	65.463	Pundamilia_nyererei
ENSRBIG00000028279	YTHDC1	96	67.173	ENSPNAG00000028365	ythdc1	91	68.017	Pygocentrus_nattereri
ENSRBIG00000028279	YTHDC1	96	91.304	ENSRNOG00000001996	Ythdc1	91	93.195	Rattus_norvegicus
ENSRBIG00000028279	YTHDC1	100	98.906	ENSRROG00000035028	YTHDC1	100	98.906	Rhinopithecus_roxellana
ENSRBIG00000028279	YTHDC1	100	98.495	ENSSBOG00000022353	YTHDC1	100	98.495	Saimiri_boliviensis_boliviensis
ENSRBIG00000028279	YTHDC1	96	85.962	ENSSHAG00000002538	YTHDC1	91	86.623	Sarcophilus_harrisii
ENSRBIG00000028279	YTHDC1	96	66.414	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSRBIG00000028279	YTHDC1	57	59.513	ENSSMAG00000009086	ythdc1	60	64.640	Scophthalmus_maximus
ENSRBIG00000028279	YTHDC1	54	56.020	ENSSDUG00000022008	ythdc1	59	66.366	Seriola_dumerili
ENSRBIG00000028279	YTHDC1	54	56.020	ENSSLDG00000007926	ythdc1	59	65.914	Seriola_lalandi_dorsalis
ENSRBIG00000028279	YTHDC1	80	96.758	ENSSARG00000010960	YTHDC1	100	96.758	Sorex_araneus
ENSRBIG00000028279	YTHDC1	96	78.887	ENSSPUG00000009357	YTHDC1	92	82.280	Sphenodon_punctatus
ENSRBIG00000028279	YTHDC1	58	61.538	ENSSPAG00000011449	ythdc1	59	65.843	Stegastes_partitus
ENSRBIG00000028279	YTHDC1	99	94.550	ENSSSCG00000035505	YTHDC1	100	96.377	Sus_scrofa
ENSRBIG00000028279	YTHDC1	96	82.726	ENSTGUG00000004452	-	91	84.273	Taeniopygia_guttata
ENSRBIG00000028279	YTHDC1	63	65.000	ENSTRUG00000010142	ythdc1	69	66.667	Takifugu_rubripes
ENSRBIG00000028279	YTHDC1	90	63.636	ENSTNIG00000013243	ythdc1	88	65.367	Tetraodon_nigroviridis
ENSRBIG00000028279	YTHDC1	96	84.466	ENSTBEG00000011546	YTHDC1	91	86.527	Tupaia_belangeri
ENSRBIG00000028279	YTHDC1	99	94.384	ENSTTRG00000005083	YTHDC1	99	94.384	Tursiops_truncatus
ENSRBIG00000028279	YTHDC1	94	96.070	ENSUAMG00000010388	YTHDC1	100	96.070	Ursus_americanus
ENSRBIG00000028279	YTHDC1	99	82.118	ENSUMAG00000013668	YTHDC1	98	82.118	Ursus_maritimus
ENSRBIG00000028279	YTHDC1	99	93.122	ENSVPAG00000009040	YTHDC1	99	93.122	Vicugna_pacos
ENSRBIG00000028279	YTHDC1	99	96.438	ENSVVUG00000005387	YTHDC1	100	95.930	Vulpes_vulpes
ENSRBIG00000028279	YTHDC1	97	68.691	ENSXETG00000017960	ythdc1	91	70.501	Xenopus_tropicalis
ENSRBIG00000028279	YTHDC1	71	51.027	ENSXCOG00000000530	ythdc1	87	52.041	Xiphophorus_couchianus
ENSRBIG00000028279	YTHDC1	58	58.744	ENSXMAG00000005196	ythdc1	61	64.253	Xiphophorus_maculatus