EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000028335 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 74926 bases
Position: chrMCGX01015066.1:619710-694635
Accession: 108518132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000008965	RNA_pol_Rpb1_5	PF04998.17	6.1e-104	1	1
ENSRBIP00000008965	RNA_pol_Rpb1_4	PF05000.17	1.7e-25	1	1
ENSRBIP00000008965	RNA_pol_Rpb1_2	PF00623.20	1.8e-70	1	1
ENSRBIP00000008965	RNA_pol_Rpb1_3	PF04983.18	4.1e-36	1	1
ENSRBIP00000008965	RNA_pol_Rpb1_1	PF04997.12	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000032577	POLR1A-201	8499	XM_017856322	ENSRBIP00000008965	1720 (aa)	XP_017711811	A0A2K6KCF5

Gene Model

Click here to download ENSRBIG00000028335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000028335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000028335	POLR1A	62	31.068	ENSRBIG00000034967	POLR3A	69	31.068
ENSRBIG00000028335	POLR1A	88	30.769	ENSRBIG00000002471	-	71	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000028335	POLR1A	100	97.035	ENSG00000068654	POLR1A	100	97.035	Homo_sapiens
ENSRBIG00000028335	POLR1A	69	67.761	ENSAPOG00000017945	polr1a	99	68.098	Acanthochromis_polyacanthus
ENSRBIG00000028335	POLR1A	100	90.708	ENSAMEG00000005807	POLR1A	100	91.701	Ailuropoda_melanoleuca
ENSRBIG00000028335	POLR1A	96	67.102	ENSACIG00000022147	polr1a	100	66.302	Amphilophus_citrinellus
ENSRBIG00000028335	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.099	Amphiprion_ocellaris
ENSRBIG00000028335	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSRBIG00000028335	POLR1A	100	65.665	ENSATEG00000016773	polr1a	100	65.491	Anabas_testudineus
ENSRBIG00000028335	POLR1A	86	73.035	ENSAPLG00000013871	POLR1A	99	73.035	Anas_platyrhynchos
ENSRBIG00000028335	POLR1A	99	69.538	ENSACAG00000012141	POLR1A	99	68.606	Anolis_carolinensis
ENSRBIG00000028335	POLR1A	100	94.360	ENSANAG00000033927	POLR1A	100	94.186	Aotus_nancymaae
ENSRBIG00000028335	POLR1A	100	61.296	ENSACLG00000020541	polr1a	100	61.313	Astatotilapia_calliptera
ENSRBIG00000028335	POLR1A	100	89.657	ENSBTAG00000006481	POLR1A	100	89.657	Bos_taurus
ENSRBIG00000028335	POLR1A	99	38.239	WBGene00012999	rpoa-1	98	38.138	Caenorhabditis_elegans
ENSRBIG00000028335	POLR1A	100	94.070	ENSCJAG00000019547	POLR1A	100	94.070	Callithrix_jacchus
ENSRBIG00000028335	POLR1A	100	90.418	ENSCAFG00000007613	POLR1A	100	90.233	Canis_familiaris
ENSRBIG00000028335	POLR1A	100	90.214	ENSCAFG00020014752	POLR1A	100	90.029	Canis_lupus_dingo
ENSRBIG00000028335	POLR1A	100	87.775	ENSCHIG00000018204	POLR1A	100	87.717	Capra_hircus
ENSRBIG00000028335	POLR1A	100	89.657	ENSTSYG00000002761	POLR1A	100	89.134	Carlito_syrichta
ENSRBIG00000028335	POLR1A	97	83.661	ENSCAPG00000010132	POLR1A	100	83.333	Cavia_aperea
ENSRBIG00000028335	POLR1A	100	88.153	ENSCPOG00000012350	POLR1A	100	87.979	Cavia_porcellus
ENSRBIG00000028335	POLR1A	100	94.709	ENSCCAG00000019839	POLR1A	100	94.709	Cebus_capucinus
ENSRBIG00000028335	POLR1A	100	98.605	ENSCATG00000029786	POLR1A	100	98.605	Cercocebus_atys
ENSRBIG00000028335	POLR1A	100	88.812	ENSCLAG00000005187	POLR1A	100	88.348	Chinchilla_lanigera
ENSRBIG00000028335	POLR1A	100	98.721	ENSCSAG00000016251	POLR1A	100	98.721	Chlorocebus_sabaeus
ENSRBIG00000028335	POLR1A	99	74.768	ENSCPBG00000001115	POLR1A	99	74.291	Chrysemys_picta_bellii
ENSRBIG00000028335	POLR1A	99	46.667	ENSCSAVG00000007184	-	92	54.715	Ciona_savignyi
ENSRBIG00000028335	POLR1A	100	96.223	ENSCANG00000031785	POLR1A	100	96.223	Colobus_angolensis_palliatus
ENSRBIG00000028335	POLR1A	100	82.149	ENSCGRG00001006651	Polr1a	100	82.513	Cricetulus_griseus_chok1gshd
ENSRBIG00000028335	POLR1A	60	85.645	ENSCGRG00000010834	Polr1a	100	86.267	Cricetulus_griseus_crigri
ENSRBIG00000028335	POLR1A	100	62.087	ENSCSEG00000020190	polr1a	100	61.891	Cynoglossus_semilaevis
ENSRBIG00000028335	POLR1A	100	64.380	ENSCVAG00000020941	polr1a	100	64.948	Cyprinodon_variegatus
ENSRBIG00000028335	POLR1A	100	66.860	ENSDARG00000098375	polr1a	100	66.415	Danio_rerio
ENSRBIG00000028335	POLR1A	100	82.551	ENSDNOG00000010829	POLR1A	100	82.029	Dasypus_novemcinctus
ENSRBIG00000028335	POLR1A	100	87.276	ENSDORG00000008298	Polr1a	100	87.102	Dipodomys_ordii
ENSRBIG00000028335	POLR1A	80	44.229	FBgn0019938	RpI1	99	42.973	Drosophila_melanogaster
ENSRBIG00000028335	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSRBIG00000028335	POLR1A	88	67.442	ENSEBUG00000005667	-	99	67.442	Eptatretus_burgeri
ENSRBIG00000028335	POLR1A	100	91.580	ENSEASG00005001625	POLR1A	100	91.580	Equus_asinus_asinus
ENSRBIG00000028335	POLR1A	100	91.580	ENSECAG00000030510	-	100	92.620	Equus_caballus
ENSRBIG00000028335	POLR1A	100	91.580	ENSECAG00000036306	-	100	92.620	Equus_caballus
ENSRBIG00000028335	POLR1A	100	91.580	ENSECAG00000010092	POLR1A	100	92.620	Equus_caballus
ENSRBIG00000028335	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSRBIG00000028335	POLR1A	100	67.285	ENSELUG00000012769	polr1a	99	67.227	Esox_lucius
ENSRBIG00000028335	POLR1A	100	91.221	ENSFCAG00000008966	POLR1A	100	91.047	Felis_catus
ENSRBIG00000028335	POLR1A	99	70.968	ENSFALG00000010082	POLR1A	99	70.475	Ficedula_albicollis
ENSRBIG00000028335	POLR1A	100	88.560	ENSFDAG00000013726	POLR1A	100	87.805	Fukomys_damarensis
ENSRBIG00000028335	POLR1A	100	62.159	ENSFHEG00000005996	polr1a	100	61.806	Fundulus_heteroclitus
ENSRBIG00000028335	POLR1A	100	59.849	ENSGMOG00000002230	polr1a	100	59.757	Gadus_morhua
ENSRBIG00000028335	POLR1A	90	69.300	ENSGALG00000038160	-	99	69.162	Gallus_gallus
ENSRBIG00000028335	POLR1A	100	64.580	ENSGAFG00000015266	polr1a	100	64.195	Gambusia_affinis
ENSRBIG00000028335	POLR1A	100	64.937	ENSGACG00000018791	polr1a	100	64.413	Gasterosteus_aculeatus
ENSRBIG00000028335	POLR1A	89	75.586	ENSGAGG00000004984	-	96	80.657	Gopherus_agassizii
ENSRBIG00000028335	POLR1A	100	97.093	ENSGGOG00000001788	POLR1A	100	97.093	Gorilla_gorilla
ENSRBIG00000028335	POLR1A	90	64.178	ENSHBUG00000020021	polr1a	99	64.377	Haplochromis_burtoni
ENSRBIG00000028335	POLR1A	100	88.618	ENSHGLG00000006334	POLR1A	100	88.444	Heterocephalus_glaber_female
ENSRBIG00000028335	POLR1A	100	88.361	ENSHGLG00100006614	POLR1A	100	88.188	Heterocephalus_glaber_male
ENSRBIG00000028335	POLR1A	100	62.197	ENSHCOG00000003345	polr1a	100	61.965	Hippocampus_comes
ENSRBIG00000028335	POLR1A	100	65.703	ENSIPUG00000013174	polr1a	100	65.147	Ictalurus_punctatus
ENSRBIG00000028335	POLR1A	99	87.202	ENSSTOG00000012580	POLR1A	99	86.795	Ictidomys_tridecemlineatus
ENSRBIG00000028335	POLR1A	100	87.478	ENSJJAG00000013113	Polr1a	100	87.304	Jaculus_jaculus
ENSRBIG00000028335	POLR1A	100	65.912	ENSKMAG00000007399	polr1a	100	65.142	Kryptolebias_marmoratus
ENSRBIG00000028335	POLR1A	95	68.392	ENSLBEG00000015401	polr1a	99	67.758	Labrus_bergylta
ENSRBIG00000028335	POLR1A	53	75.952	ENSLACG00000003218	polr1a	100	75.952	Latimeria_chalumnae
ENSRBIG00000028335	POLR1A	100	70.306	ENSLOCG00000010881	polr1a	100	69.896	Lepisosteus_oculatus
ENSRBIG00000028335	POLR1A	100	89.236	ENSLAFG00000014948	POLR1A	100	89.352	Loxodonta_africana
ENSRBIG00000028335	POLR1A	100	98.663	ENSMFAG00000046097	POLR1A	100	98.663	Macaca_fascicularis
ENSRBIG00000028335	POLR1A	100	98.547	ENSMMUG00000015815	POLR1A	100	98.547	Macaca_mulatta
ENSRBIG00000028335	POLR1A	100	98.605	ENSMNEG00000043313	POLR1A	100	98.605	Macaca_nemestrina
ENSRBIG00000028335	POLR1A	100	97.965	ENSMLEG00000042428	POLR1A	100	97.965	Mandrillus_leucophaeus
ENSRBIG00000028335	POLR1A	100	65.742	ENSMAMG00000016565	polr1a	100	65.815	Mastacembelus_armatus
ENSRBIG00000028335	POLR1A	100	65.167	ENSMZEG00005004915	polr1a	100	65.336	Maylandia_zebra
ENSRBIG00000028335	POLR1A	99	68.928	ENSMGAG00000013111	POLR1A	99	68.786	Meleagris_gallopavo
ENSRBIG00000028335	POLR1A	92	86.704	ENSMAUG00000008497	Polr1a	100	86.924	Mesocricetus_auratus
ENSRBIG00000028335	POLR1A	100	92.040	ENSMICG00000000757	POLR1A	100	91.749	Microcebus_murinus
ENSRBIG00000028335	POLR1A	100	86.856	ENSMOCG00000000122	Polr1a	100	86.798	Microtus_ochrogaster
ENSRBIG00000028335	POLR1A	100	65.215	ENSMMOG00000010216	polr1a	100	64.750	Mola_mola
ENSRBIG00000028335	POLR1A	100	75.100	ENSMODG00000009335	POLR1A	100	74.684	Monodelphis_domestica
ENSRBIG00000028335	POLR1A	100	65.741	ENSMALG00000013363	polr1a	100	64.824	Monopterus_albus
ENSRBIG00000028335	POLR1A	100	85.466	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.350	Mus_caroli
ENSRBIG00000028335	POLR1A	100	85.814	ENSMUSG00000049553	Polr1a	100	85.756	Mus_musculus
ENSRBIG00000028335	POLR1A	100	86.161	MGP_PahariEiJ_G0022230	Polr1a	100	86.045	Mus_pahari
ENSRBIG00000028335	POLR1A	100	84.405	MGP_SPRETEiJ_G0029499	Polr1a	100	84.646	Mus_spretus
ENSRBIG00000028335	POLR1A	100	90.523	ENSMPUG00000009135	POLR1A	100	90.407	Mustela_putorius_furo
ENSRBIG00000028335	POLR1A	100	89.184	ENSMLUG00000015723	POLR1A	100	88.837	Myotis_lucifugus
ENSRBIG00000028335	POLR1A	100	87.298	ENSNGAG00000017907	Polr1a	100	87.674	Nannospalax_galili
ENSRBIG00000028335	POLR1A	100	65.283	ENSNBRG00000000519	polr1a	100	65.451	Neolamprologus_brichardi
ENSRBIG00000028335	POLR1A	100	94.850	ENSNLEG00000002264	POLR1A	100	94.850	Nomascus_leucogenys
ENSRBIG00000028335	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSRBIG00000028335	POLR1A	99	82.391	ENSOPRG00000008269	POLR1A	100	81.802	Ochotona_princeps
ENSRBIG00000028335	POLR1A	100	89.315	ENSODEG00000003542	POLR1A	100	88.850	Octodon_degus
ENSRBIG00000028335	POLR1A	100	66.010	ENSONIG00000015895	polr1a	100	65.547	Oreochromis_niloticus
ENSRBIG00000028335	POLR1A	100	90.413	ENSOCUG00000010138	POLR1A	100	90.413	Oryctolagus_cuniculus
ENSRBIG00000028335	POLR1A	100	64.462	ENSORLG00000008753	polr1a	99	64.737	Oryzias_latipes
ENSRBIG00000028335	POLR1A	100	64.005	ENSORLG00020020726	polr1a	99	63.578	Oryzias_latipes_hni
ENSRBIG00000028335	POLR1A	95	75.532	ENSORLG00015016071	polr1a	98	75.556	Oryzias_latipes_hsok
ENSRBIG00000028335	POLR1A	100	90.872	ENSOGAG00000004031	POLR1A	100	90.872	Otolemur_garnettii
ENSRBIG00000028335	POLR1A	100	89.089	ENSOARG00000020601	POLR1A	100	89.147	Ovis_aries
ENSRBIG00000028335	POLR1A	100	96.744	ENSPPAG00000042450	POLR1A	100	96.744	Pan_paniscus
ENSRBIG00000028335	POLR1A	100	91.453	ENSPPRG00000006702	POLR1A	100	91.105	Panthera_pardus
ENSRBIG00000028335	POLR1A	100	90.672	ENSPTIG00000018783	POLR1A	100	90.556	Panthera_tigris_altaica
ENSRBIG00000028335	POLR1A	100	96.570	ENSPTRG00000012147	POLR1A	100	96.570	Pan_troglodytes
ENSRBIG00000028335	POLR1A	100	98.488	ENSPANG00000025908	POLR1A	100	98.488	Papio_anubis
ENSRBIG00000028335	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSRBIG00000028335	POLR1A	63	70.508	ENSPSIG00000009321	-	99	70.394	Pelodiscus_sinensis
ENSRBIG00000028335	POLR1A	54	68.342	ENSPMGG00000009718	polr1a	95	68.342	Periophthalmus_magnuspinnatus
ENSRBIG00000028335	POLR1A	83	89.916	ENSPEMG00000022224	Polr1a	100	87.507	Peromyscus_maniculatus_bairdii
ENSRBIG00000028335	POLR1A	95	78.749	ENSPCIG00000004222	POLR1A	99	78.176	Phascolarctos_cinereus
ENSRBIG00000028335	POLR1A	100	65.527	ENSPFOG00000005025	polr1a	100	65.122	Poecilia_formosa
ENSRBIG00000028335	POLR1A	100	65.759	ENSPLAG00000021389	polr1a	100	65.238	Poecilia_latipinna
ENSRBIG00000028335	POLR1A	100	63.789	ENSPMEG00000006463	polr1a	100	63.810	Poecilia_mexicana
ENSRBIG00000028335	POLR1A	100	65.527	ENSPREG00000002389	polr1a	100	65.006	Poecilia_reticulata
ENSRBIG00000028335	POLR1A	100	96.163	ENSPPYG00000012217	POLR1A	100	96.163	Pongo_abelii
ENSRBIG00000028335	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSRBIG00000028335	POLR1A	100	91.749	ENSPCOG00000026987	POLR1A	100	91.517	Propithecus_coquereli
ENSRBIG00000028335	POLR1A	95	91.176	ENSPVAG00000012674	POLR1A	95	90.459	Pteropus_vampyrus
ENSRBIG00000028335	POLR1A	100	65.167	ENSPNYG00000000026	polr1a	100	65.336	Pundamilia_nyererei
ENSRBIG00000028335	POLR1A	100	66.917	ENSPNAG00000019223	polr1a	99	68.288	Pygocentrus_nattereri
ENSRBIG00000028335	POLR1A	100	87.377	ENSRNOG00000009545	Polr1a	100	87.145	Rattus_norvegicus
ENSRBIG00000028335	POLR1A	100	99.942	ENSRROG00000031473	POLR1A	100	99.942	Rhinopithecus_roxellana
ENSRBIG00000028335	POLR1A	99	37.136	YOR341W	RPA190	99	36.921	Saccharomyces_cerevisiae
ENSRBIG00000028335	POLR1A	100	93.837	ENSSBOG00000030262	POLR1A	100	93.837	Saimiri_boliviensis_boliviensis
ENSRBIG00000028335	POLR1A	100	73.487	ENSSHAG00000014739	POLR1A	100	72.270	Sarcophilus_harrisii
ENSRBIG00000028335	POLR1A	100	67.630	ENSSFOG00015019716	polr1a	100	67.013	Scleropages_formosus
ENSRBIG00000028335	POLR1A	100	66.242	ENSSMAG00000014342	polr1a	100	66.107	Scophthalmus_maximus
ENSRBIG00000028335	POLR1A	100	66.130	ENSSDUG00000014631	polr1a	100	66.242	Seriola_dumerili
ENSRBIG00000028335	POLR1A	100	64.191	ENSSLDG00000024095	polr1a	100	64.290	Seriola_lalandi_dorsalis
ENSRBIG00000028335	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSRBIG00000028335	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSRBIG00000028335	POLR1A	63	71.769	ENSSPAG00000016341	polr1a	94	71.769	Stegastes_partitus
ENSRBIG00000028335	POLR1A	83	90.820	ENSSSCG00000008226	POLR1A	99	90.794	Sus_scrofa
ENSRBIG00000028335	POLR1A	99	70.235	ENSTGUG00000010704	POLR1A	100	69.765	Taeniopygia_guttata
ENSRBIG00000028335	POLR1A	100	64.207	ENSTRUG00000002210	polr1a	99	63.725	Takifugu_rubripes
ENSRBIG00000028335	POLR1A	100	60.610	ENSTNIG00000010116	polr1a	100	60.587	Tetraodon_nigroviridis
ENSRBIG00000028335	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSRBIG00000028335	POLR1A	100	85.772	ENSTTRG00000008597	POLR1A	100	85.366	Tursiops_truncatus
ENSRBIG00000028335	POLR1A	69	90.886	ENSUAMG00000012158	-	94	90.295	Ursus_americanus
ENSRBIG00000028335	POLR1A	100	89.721	ENSUMAG00000006700	POLR1A	100	89.489	Ursus_maritimus
ENSRBIG00000028335	POLR1A	100	90.250	ENSVVUG00000001245	POLR1A	100	90.064	Vulpes_vulpes
ENSRBIG00000028335	POLR1A	100	67.901	ENSXETG00000001952	polr1a	100	69.328	Xenopus_tropicalis
ENSRBIG00000028335	POLR1A	100	65.645	ENSXMAG00000004032	polr1a	100	64.638	Xiphophorus_maculatus