EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000028593 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: D6S45|NELF-E|RD|RDBP|RDP
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 6599 bases
Position: chrMCGX01017294.1:27120-33718
Accession: 108520266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000009398	RRM_1	PF00076.22	3.7e-11	1	1
ENSRBIP00000009393	RRM_1	PF00076.22	4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000033014	-	1119	-	ENSRBIP00000009398	372 (aa)	-	A0A2K6KDP9
ENSRBIT00000033015	-	111	-	ENSRBIP00000009399	36 (aa)	-	A0A2K6KDQ4
ENSRBIT00000033009	-	1471	XM_017859571	ENSRBIP00000009393	390 (aa)	XP_017715060	A0A2K6KDP2

Gene Model

Click here to download ENSRBIG00000028593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000028593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000028593	-	99	77.717	ENSRBIG00000028905	-	100	72.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000028593	-	100	96.316	ENSG00000204356	NELFE	100	99.371	Homo_sapiens
ENSRBIG00000028593	-	100	93.717	ENSAMEG00000002062	NELFE	98	93.717	Ailuropoda_melanoleuca
ENSRBIG00000028593	-	100	95.526	ENSANAG00000038256	NELFE	100	95.526	Aotus_nancymaae
ENSRBIG00000028593	-	100	93.333	ENSBTAG00000007453	NELFE	100	93.333	Bos_taurus
ENSRBIG00000028593	-	100	96.579	ENSCJAG00000002368	-	98	96.579	Callithrix_jacchus
ENSRBIG00000028593	-	100	93.077	ENSCAFG00020000938	NELFE	100	93.077	Canis_lupus_dingo
ENSRBIG00000028593	-	100	92.308	ENSCHIG00000013713	NELFE	100	92.308	Capra_hircus
ENSRBIG00000028593	-	100	95.897	ENSTSYG00000012132	-	100	95.897	Carlito_syrichta
ENSRBIG00000028593	-	97	90.237	ENSCAPG00000015145	NELFE	89	88.986	Cavia_aperea
ENSRBIG00000028593	-	100	92.564	ENSCPOG00000031829	NELFE	100	92.821	Cavia_porcellus
ENSRBIG00000028593	-	100	95.897	ENSCCAG00000014945	NELFE	100	95.897	Cebus_capucinus
ENSRBIG00000028593	-	100	97.179	ENSCATG00000028969	NELFE	100	97.179	Cercocebus_atys
ENSRBIG00000028593	-	100	90.769	ENSCLAG00000009684	NELFE	100	91.282	Chinchilla_lanigera
ENSRBIG00000028593	-	100	95.897	ENSCSAG00000008969	NELFE	100	95.897	Chlorocebus_sabaeus
ENSRBIG00000028593	-	84	72.626	ENSCPBG00000000225	NELFE	97	71.591	Chrysemys_picta_bellii
ENSRBIG00000028593	-	100	98.974	ENSCANG00000022451	NELFE	98	98.974	Colobus_angolensis_palliatus
ENSRBIG00000028593	-	98	91.601	ENSCGRG00001016608	Nelfe	100	91.601	Cricetulus_griseus_chok1gshd
ENSRBIG00000028593	-	92	90.756	ENSCGRG00000014034	Nelfe	90	90.774	Cricetulus_griseus_crigri
ENSRBIG00000028593	-	98	66.667	ENSCVAG00000003087	nelfe	99	58.537	Cyprinodon_variegatus
ENSRBIG00000028593	-	94	78.630	ENSDNOG00000006996	-	94	75.904	Dasypus_novemcinctus
ENSRBIG00000028593	-	100	94.103	ENSDNOG00000041886	-	100	92.564	Dasypus_novemcinctus
ENSRBIG00000028593	-	50	96.923	ENSDORG00000011705	Nelfe	100	80.457	Dipodomys_ordii
ENSRBIG00000028593	-	98	45.753	ENSEBUG00000017070	nelfe	99	60.109	Eptatretus_burgeri
ENSRBIG00000028593	-	100	91.858	ENSEASG00005015538	NELFE	100	91.858	Equus_asinus_asinus
ENSRBIG00000028593	-	100	95.128	ENSECAG00000012274	NELFE	87	95.128	Equus_caballus
ENSRBIG00000028593	-	72	97.778	ENSEEUG00000005004	NELFE	75	97.778	Erinaceus_europaeus
ENSRBIG00000028593	-	97	59.838	ENSELUG00000005830	nelfe	99	70.732	Esox_lucius
ENSRBIG00000028593	-	100	94.872	ENSFCAG00000004518	NELFE	100	94.872	Felis_catus
ENSRBIG00000028593	-	98	88.315	ENSFDAG00000011589	NELFE	100	88.043	Fukomys_damarensis
ENSRBIG00000028593	-	97	59.591	ENSGMOG00000005973	nelfe	99	59.341	Gadus_morhua
ENSRBIG00000028593	-	98	62.162	ENSGALG00000045676	NELFE	99	76.378	Gallus_gallus
ENSRBIG00000028593	-	98	59.635	ENSGACG00000002935	nelfe	99	63.684	Gasterosteus_aculeatus
ENSRBIG00000028593	-	98	63.144	ENSGAGG00000005411	NELFE	100	63.904	Gopherus_agassizii
ENSRBIG00000028593	-	100	96.021	ENSGGOG00000002265	NELFE	100	96.021	Gorilla_gorilla
ENSRBIG00000028593	-	73	82.746	ENSHGLG00000016601	NELFE	92	84.669	Heterocephalus_glaber_female
ENSRBIG00000028593	-	99	48.974	ENSHCOG00000007147	nelfe	97	65.000	Hippocampus_comes
ENSRBIG00000028593	-	100	91.795	ENSSTOG00000027409	NELFE	100	85.450	Ictidomys_tridecemlineatus
ENSRBIG00000028593	-	94	86.885	ENSJJAG00000014005	Nelfe	90	80.909	Jaculus_jaculus
ENSRBIG00000028593	-	100	94.359	ENSLAFG00000028155	NELFE	99	100.000	Loxodonta_africana
ENSRBIG00000028593	-	99	70.180	ENSMFAG00000031089	-	100	68.194	Macaca_fascicularis
ENSRBIG00000028593	-	100	96.667	ENSMFAG00000036108	-	100	96.667	Macaca_fascicularis
ENSRBIG00000028593	-	100	97.867	ENSMMUG00000000735	-	100	97.867	Macaca_mulatta
ENSRBIG00000028593	-	96	74.510	ENSMMUG00000041521	-	100	73.389	Macaca_mulatta
ENSRBIG00000028593	-	100	97.949	ENSMNEG00000032542	NELFE	100	97.949	Macaca_nemestrina
ENSRBIG00000028593	-	100	97.436	ENSMLEG00000030245	NELFE	100	95.767	Mandrillus_leucophaeus
ENSRBIG00000028593	-	85	56.973	ENSMGAG00000001297	NELFE	74	76.000	Meleagris_gallopavo
ENSRBIG00000028593	-	98	87.664	ENSMAUG00000016812	Nelfe	100	85.870	Mesocricetus_auratus
ENSRBIG00000028593	-	100	92.308	ENSMICG00000003287	NELFE	100	86.737	Microcebus_murinus
ENSRBIG00000028593	-	98	90.026	ENSMOCG00000003723	Nelfe	100	90.289	Microtus_ochrogaster
ENSRBIG00000028593	-	82	92.442	ENSMODG00000015063	NELFE	99	94.086	Monodelphis_domestica
ENSRBIG00000028593	-	98	85.870	ENSMUSG00000024369	Nelfe	100	83.424	Mus_musculus
ENSRBIG00000028593	-	100	90.769	ENSMPUG00000010581	NELFE	98	86.649	Mustela_putorius_furo
ENSRBIG00000028593	-	100	85.385	ENSMLUG00000000622	-	98	83.289	Myotis_lucifugus
ENSRBIG00000028593	-	99	73.138	ENSMLUG00000028808	-	100	73.740	Myotis_lucifugus
ENSRBIG00000028593	-	100	79.373	ENSMLUG00000028182	-	99	79.373	Myotis_lucifugus
ENSRBIG00000028593	-	100	78.974	ENSMLUG00000028069	-	98	78.718	Myotis_lucifugus
ENSRBIG00000028593	-	100	80.769	ENSMLUG00000030380	-	99	77.105	Myotis_lucifugus
ENSRBIG00000028593	-	98	86.413	ENSNGAG00000016248	Nelfe	100	84.239	Nannospalax_galili
ENSRBIG00000028593	-	100	82.308	ENSNLEG00000006449	NELFE	98	75.661	Nomascus_leucogenys
ENSRBIG00000028593	-	100	82.051	ENSMEUG00000006053	NELFE	100	81.795	Notamacropus_eugenii
ENSRBIG00000028593	-	100	92.821	ENSOPRG00000003942	NELFE	100	92.821	Ochotona_princeps
ENSRBIG00000028593	-	98	92.126	ENSODEG00000017670	NELFE	100	91.864	Octodon_degus
ENSRBIG00000028593	-	100	96.410	ENSOCUG00000007012	NELFE	100	95.641	Oryctolagus_cuniculus
ENSRBIG00000028593	-	62	75.524	ENSOMEG00000008581	nelfe	99	60.892	Oryzias_melastigma
ENSRBIG00000028593	-	100	92.308	ENSOGAG00000009574	NELFE	98	86.053	Otolemur_garnettii
ENSRBIG00000028593	-	100	92.308	ENSOARG00000002616	NELFE	98	86.472	Ovis_aries
ENSRBIG00000028593	-	100	97.436	ENSPPAG00000039942	NELFE	100	97.436	Pan_paniscus
ENSRBIG00000028593	-	100	95.263	ENSPPRG00000004421	NELFE	100	95.263	Panthera_pardus
ENSRBIG00000028593	-	100	95.263	ENSPTIG00000003753	NELFE	100	95.263	Panthera_tigris_altaica
ENSRBIG00000028593	-	100	97.179	ENSPTRG00000017996	NELFE	100	97.179	Pan_troglodytes
ENSRBIG00000028593	-	100	97.436	ENSPANG00000019366	NELFE	100	95.767	Papio_anubis
ENSRBIG00000028593	-	98	67.717	ENSPKIG00000012048	nelfe	99	59.239	Paramormyrops_kingsleyae
ENSRBIG00000028593	-	100	91.371	ENSPCIG00000018791	NELFE	100	79.188	Phascolarctos_cinereus
ENSRBIG00000028593	-	64	77.679	ENSPREG00000002338	nelfe	99	55.041	Poecilia_reticulata
ENSRBIG00000028593	-	100	96.923	ENSPPYG00000016471	NELFE	100	96.923	Pongo_abelii
ENSRBIG00000028593	-	69	91.418	ENSPCAG00000004108	NELFE	68	89.552	Procavia_capensis
ENSRBIG00000028593	-	100	94.709	ENSPCOG00000024944	NELFE	100	94.709	Propithecus_coquereli
ENSRBIG00000028593	-	100	89.390	ENSPVAG00000005135	NELFE	100	86.472	Pteropus_vampyrus
ENSRBIG00000028593	-	98	85.095	ENSRNOG00000000420	Nelfe	100	90.289	Rattus_norvegicus
ENSRBIG00000028593	-	100	99.744	ENSRROG00000041993	NELFE	100	99.744	Rhinopithecus_roxellana
ENSRBIG00000028593	-	100	95.789	ENSSBOG00000035865	NELFE	98	95.789	Saimiri_boliviensis_boliviensis
ENSRBIG00000028593	-	100	90.000	ENSSHAG00000008908	NELFE	99	90.000	Sarcophilus_harrisii
ENSRBIG00000028593	-	54	46.190	ENSSFOG00015017039	nelfe	99	67.632	Scleropages_formosus
ENSRBIG00000028593	-	93	81.870	ENSSARG00000003684	NELFE	94	89.565	Sorex_araneus
ENSRBIG00000028593	-	98	67.624	ENSSPUG00000012971	NELFE	100	63.807	Sphenodon_punctatus
ENSRBIG00000028593	-	100	93.590	ENSSSCG00000001423	NELFE	100	86.508	Sus_scrofa
ENSRBIG00000028593	-	100	88.329	ENSTTRG00000005923	NELFE	100	85.411	Tursiops_truncatus
ENSRBIG00000028593	-	100	91.026	ENSUAMG00000024338	NELFE	100	93.333	Ursus_americanus
ENSRBIG00000028593	-	100	91.026	ENSUMAG00000012674	NELFE	100	93.333	Ursus_maritimus
ENSRBIG00000028593	-	64	77.679	ENSXCOG00000019513	nelfe	99	55.313	Xiphophorus_couchianus