EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000028811 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 44198 bases
Position: chrMCGX01020904.1:442562-486759
Accession: 108521797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000009878	LSM	PF01423.22	4e-21	1	1
ENSRBIP00000009873	LSM	PF01423.22	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000033500	-	476	XM_017861757	ENSRBIP00000009878	86 (aa)	XP_017717246	A0A2K6KF18
ENSRBIT00000033495	-	384	-	ENSRBIP00000009873	127 (aa)	-	A0A2K6KF13

Gene Model

Click here to download ENSRBIG00000028811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000028811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000028811	-	100	96.512	ENSRBIG00000030414	-	100	96.512
ENSRBIG00000028811	-	52	42.424	ENSRBIG00000036268	-	51	42.424
ENSRBIG00000028811	-	77	51.515	ENSRBIG00000027878	LSM6	83	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000028811	-	50	97.674	ENSCHIG00000017139	-	87	91.525	Capra_hircus
ENSRBIG00000028811	-	100	100.000	ENSCATG00000003132	-	100	100.000	Cercocebus_atys
ENSRBIG00000028811	-	50	100.000	ENSCPBG00000001948	-	94	91.837	Chrysemys_picta_bellii
ENSRBIG00000028811	-	100	100.000	ENSCANG00000006758	-	100	100.000	Colobus_angolensis_palliatus
ENSRBIG00000028811	-	91	58.974	ENSFCAG00000037511	-	87	61.644	Felis_catus
ENSRBIG00000028811	-	51	90.909	ENSFCAG00000032773	-	70	90.909	Felis_catus
ENSRBIG00000028811	-	57	87.755	ENSGAGG00000014834	-	75	97.727	Gopherus_agassizii
ENSRBIG00000028811	-	100	100.000	ENSMFAG00000035517	-	100	100.000	Macaca_fascicularis
ENSRBIG00000028811	-	100	100.000	ENSMMUG00000009302	-	100	100.000	Macaca_mulatta
ENSRBIG00000028811	-	100	100.000	ENSMNEG00000030762	-	100	100.000	Macaca_nemestrina
ENSRBIG00000028811	-	100	100.000	ENSMLEG00000033558	-	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000028811	-	100	100.000	ENSNLEG00000005835	-	100	100.000	Nomascus_leucogenys
ENSRBIG00000028811	-	50	97.674	ENSOGAG00000014320	-	100	96.226	Otolemur_garnettii
ENSRBIG00000028811	-	100	100.000	ENSPPAG00000003072	-	100	100.000	Pan_paniscus
ENSRBIG00000028811	-	73	76.190	ENSPPRG00000020147	-	100	76.190	Panthera_pardus
ENSRBIG00000028811	-	100	100.000	ENSPTRG00000005317	-	100	93.701	Pan_troglodytes
ENSRBIG00000028811	-	100	99.213	ENSPANG00000014632	-	100	99.213	Papio_anubis
ENSRBIG00000028811	-	100	100.000	ENSPCIG00000017205	-	100	100.000	Phascolarctos_cinereus
ENSRBIG00000028811	-	53	93.478	ENSPFOG00000020883	-	100	93.478	Poecilia_formosa
ENSRBIG00000028811	-	100	100.000	ENSRROG00000031057	-	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000028811	-	64	78.182	ENSVVUG00000003155	-	73	78.182	Vulpes_vulpes