EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000029048 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 19971 bases
Position: chrMCGX01005168.1:1425871-1445841
Accession: 108537318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000010382	zf-CCCH	PF00642.24	2.3e-20	1	1
ENSRBIP00000010391	zf-CCCH	PF00642.24	8.8e-20	1	1
ENSRBIP00000010388	zf-CCCH	PF00642.24	4.1e-18	1	1
ENSRBIP00000010390	zf-CCCH	PF00642.24	7.9e-14	1	1
ENSRBIP00000010382	zf-CCCH_2	PF14608.6	1.3e-06	1	4
ENSRBIP00000010382	zf-CCCH_2	PF14608.6	1.3e-06	2	4
ENSRBIP00000010382	zf-CCCH_2	PF14608.6	1.3e-06	3	4
ENSRBIP00000010382	zf-CCCH_2	PF14608.6	1.3e-06	4	4
ENSRBIP00000010391	zf-CCCH_2	PF14608.6	1.8e-06	1	4
ENSRBIP00000010391	zf-CCCH_2	PF14608.6	1.8e-06	2	4
ENSRBIP00000010391	zf-CCCH_2	PF14608.6	1.8e-06	3	4
ENSRBIP00000010391	zf-CCCH_2	PF14608.6	1.8e-06	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000034018	CPSF4L-204	965	XM_017884587	ENSRBIP00000010391	182 (aa)	XP_017740076	A0A2K6KGJ3
ENSRBIT00000034017	CPSF4L-203	489	-	ENSRBIP00000010390	162 (aa)	-	A0A2K6KGJ1
ENSRBIT00000034009	CPSF4L-201	1045	-	ENSRBIP00000010382	171 (aa)	-	A0A2K6KGH8
ENSRBIT00000034015	CPSF4L-202	540	-	ENSRBIP00000010388	179 (aa)	-	A0A2K6KGI4

Gene Model

Click here to download ENSRBIG00000029048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000029048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000029048	CPSF4L	77	71.756	ENSRBIG00000033886	CPSF4	56	71.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000029048	CPSF4L	100	94.972	ENSG00000187959	CPSF4L	100	94.972	Homo_sapiens
ENSRBIG00000029048	CPSF4L	100	79.651	ENSAMEG00000002707	CPSF4L	65	78.652	Ailuropoda_melanoleuca
ENSRBIG00000029048	CPSF4L	93	52.318	ENSANAG00000026558	-	95	52.318	Aotus_nancymaae
ENSRBIG00000029048	CPSF4L	91	73.006	ENSCJAG00000019911	CPSF4L	96	73.006	Callithrix_jacchus
ENSRBIG00000029048	CPSF4L	100	98.324	ENSCATG00000044555	CPSF4L	100	98.324	Cercocebus_atys
ENSRBIG00000029048	CPSF4L	100	97.222	ENSCSAG00000004429	CPSF4L	100	97.222	Chlorocebus_sabaeus
ENSRBIG00000029048	CPSF4L	100	99.383	ENSCANG00000035042	CPSF4L	100	99.383	Colobus_angolensis_palliatus
ENSRBIG00000029048	CPSF4L	99	75.439	ENSCGRG00001020079	Cpsf4l	99	73.034	Cricetulus_griseus_chok1gshd
ENSRBIG00000029048	CPSF4L	99	75.439	ENSCGRG00000010419	Cpsf4l	99	73.034	Cricetulus_griseus_crigri
ENSRBIG00000029048	CPSF4L	97	85.030	ENSDNOG00000014458	CPSF4L	87	85.030	Dasypus_novemcinctus
ENSRBIG00000029048	CPSF4L	97	86.747	ENSEASG00005018763	CPSF4L	100	87.349	Equus_asinus_asinus
ENSRBIG00000029048	CPSF4L	97	86.747	ENSECAG00000024813	CPSF4L	100	87.349	Equus_caballus
ENSRBIG00000029048	CPSF4L	97	85.542	ENSFCAG00000004745	CPSF4L	66	85.542	Felis_catus
ENSRBIG00000029048	CPSF4L	100	94.972	ENSGGOG00000026659	CPSF4L	100	94.972	Gorilla_gorilla
ENSRBIG00000029048	CPSF4L	100	82.456	ENSSTOG00000001849	CPSF4L	99	81.503	Ictidomys_tridecemlineatus
ENSRBIG00000029048	CPSF4L	100	79.651	ENSLAFG00000010697	CPSF4L	98	79.651	Loxodonta_africana
ENSRBIG00000029048	CPSF4L	100	98.324	ENSMFAG00000037840	CPSF4L	100	98.324	Macaca_fascicularis
ENSRBIG00000029048	CPSF4L	100	98.324	ENSMMUG00000001271	CPSF4L	100	98.324	Macaca_mulatta
ENSRBIG00000029048	CPSF4L	100	98.324	ENSMNEG00000045419	CPSF4L	100	98.324	Macaca_nemestrina
ENSRBIG00000029048	CPSF4L	100	98.883	ENSMLEG00000038527	CPSF4L	100	98.883	Mandrillus_leucophaeus
ENSRBIG00000029048	CPSF4L	97	77.108	ENSMAUG00000019519	-	100	77.711	Mesocricetus_auratus
ENSRBIG00000029048	CPSF4L	98	88.000	ENSMICG00000007503	CPSF4L	98	88.000	Microcebus_murinus
ENSRBIG00000029048	CPSF4L	79	78.519	ENSMOCG00000015313	-	93	78.519	Microtus_ochrogaster
ENSRBIG00000029048	CPSF4L	95	77.160	ENSMODG00000025672	CPSF4L	100	77.778	Monodelphis_domestica
ENSRBIG00000029048	CPSF4L	99	71.930	MGP_CAROLIEiJ_G0017369	-	75	71.930	Mus_caroli
ENSRBIG00000029048	CPSF4L	99	72.515	ENSMUSG00000018727	Cpsf4l	75	72.515	Mus_musculus
ENSRBIG00000029048	CPSF4L	69	71.429	MGP_PahariEiJ_G0018499	-	82	68.800	Mus_pahari
ENSRBIG00000029048	CPSF4L	83	59.574	MGP_SPRETEiJ_G0018215	-	82	65.600	Mus_spretus
ENSRBIG00000029048	CPSF4L	97	80.838	ENSMPUG00000014276	CPSF4L	100	81.437	Mustela_putorius_furo
ENSRBIG00000029048	CPSF4L	97	77.711	ENSMLUG00000009617	CPSF4L	100	74.302	Myotis_lucifugus
ENSRBIG00000029048	CPSF4L	99	78.698	ENSNGAG00000009325	-	99	78.698	Nannospalax_galili
ENSRBIG00000029048	CPSF4L	100	95.531	ENSNLEG00000001420	CPSF4L	100	95.531	Nomascus_leucogenys
ENSRBIG00000029048	CPSF4L	62	76.238	ENSMEUG00000004051	-	100	75.490	Notamacropus_eugenii
ENSRBIG00000029048	CPSF4L	72	76.068	ENSOPRG00000007484	-	81	77.064	Ochotona_princeps
ENSRBIG00000029048	CPSF4L	99	77.647	ENSOCUG00000026495	CPSF4L	76	77.647	Oryctolagus_cuniculus
ENSRBIG00000029048	CPSF4L	82	95.918	ENSPPAG00000037000	-	100	95.918	Pan_paniscus
ENSRBIG00000029048	CPSF4L	99	68.519	ENSPPRG00000001058	CPSF4L	100	66.667	Panthera_pardus
ENSRBIG00000029048	CPSF4L	99	68.519	ENSPTIG00000012676	CPSF4L	84	86.861	Panthera_tigris_altaica
ENSRBIG00000029048	CPSF4L	100	94.972	ENSPTRG00000009598	CPSF4L	100	94.972	Pan_troglodytes
ENSRBIG00000029048	CPSF4L	100	98.883	ENSPANG00000020331	CPSF4L	100	98.883	Papio_anubis
ENSRBIG00000029048	CPSF4L	97	76.506	ENSPEMG00000011680	Cpsf4l	78	72.778	Peromyscus_maniculatus_bairdii
ENSRBIG00000029048	CPSF4L	99	75.148	ENSPCIG00000001889	CPSF4L	99	76.190	Phascolarctos_cinereus
ENSRBIG00000029048	CPSF4L	86	82.979	ENSPPYG00000008589	-	93	82.979	Pongo_abelii
ENSRBIG00000029048	CPSF4L	95	89.571	ENSPCOG00000021801	CPSF4L	96	87.574	Propithecus_coquereli
ENSRBIG00000029048	CPSF4L	81	75.373	ENSPVAG00000006736	CPSF4L	86	73.881	Pteropus_vampyrus
ENSRBIG00000029048	CPSF4L	100	99.441	ENSRROG00000037051	CPSF4L	100	99.441	Rhinopithecus_roxellana
ENSRBIG00000029048	CPSF4L	95	69.231	ENSTTRG00000005243	CPSF4L	80	79.339	Tursiops_truncatus
ENSRBIG00000029048	CPSF4L	79	86.667	ENSUAMG00000007728	CPSF4L	86	86.667	Ursus_americanus
ENSRBIG00000029048	CPSF4L	79	86.667	ENSUMAG00000007869	CPSF4L	86	86.667	Ursus_maritimus