EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000029053 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 29950 bases
Position: chrMCGX01002843.1:8339642-8369591
Accession: 108530506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000010428	MMR_HSR1	PF01926.23	9.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000034067	LSG1-202	486	-	ENSRBIP00000010440	161 (aa)	-	A0A2K6KGP3
ENSRBIT00000034055	LSG1-201	3564	XM_017873472	ENSRBIP00000010428	657 (aa)	XP_017728961	A0A2K6KGM6

Gene Model

Click here to download ENSRBIG00000029053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000029053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000029053	LSG1	100	94.833	ENSG00000041802	LSG1	100	94.833	Homo_sapiens
ENSRBIG00000029053	LSG1	99	63.885	ENSAPOG00000009694	lsg1	99	64.492	Acanthochromis_polyacanthus
ENSRBIG00000029053	LSG1	99	81.639	ENSAMEG00000009343	LSG1	99	81.639	Ailuropoda_melanoleuca
ENSRBIG00000029053	LSG1	98	63.608	ENSACIG00000012406	lsg1	99	64.590	Amphilophus_citrinellus
ENSRBIG00000029053	LSG1	99	63.581	ENSAOCG00000016066	lsg1	99	64.048	Amphiprion_ocellaris
ENSRBIG00000029053	LSG1	99	64.036	ENSAPEG00000003252	lsg1	99	64.036	Amphiprion_percula
ENSRBIG00000029053	LSG1	98	65.474	ENSATEG00000011794	lsg1	99	65.145	Anabas_testudineus
ENSRBIG00000029053	LSG1	95	64.388	ENSACAG00000004222	LSG1	99	64.172	Anolis_carolinensis
ENSRBIG00000029053	LSG1	100	93.617	ENSANAG00000021153	LSG1	100	93.617	Aotus_nancymaae
ENSRBIG00000029053	LSG1	99	63.333	ENSACLG00000000520	lsg1	99	62.482	Astatotilapia_calliptera
ENSRBIG00000029053	LSG1	99	63.079	ENSAMXG00000008271	lsg1	99	63.030	Astyanax_mexicanus
ENSRBIG00000029053	LSG1	100	84.522	ENSBTAG00000008461	LSG1	100	84.825	Bos_taurus
ENSRBIG00000029053	LSG1	67	51.020	WBGene00016907	C53H9.2	90	58.065	Caenorhabditis_elegans
ENSRBIG00000029053	LSG1	100	92.705	ENSCJAG00000013962	LSG1	100	92.705	Callithrix_jacchus
ENSRBIG00000029053	LSG1	95	83.840	ENSCAFG00000013445	LSG1	99	83.840	Canis_familiaris
ENSRBIG00000029053	LSG1	99	82.451	ENSCAFG00020002216	LSG1	99	83.628	Canis_lupus_dingo
ENSRBIG00000029053	LSG1	99	83.435	ENSCHIG00000015769	LSG1	99	83.435	Capra_hircus
ENSRBIG00000029053	LSG1	100	88.012	ENSTSYG00000001447	LSG1	100	88.012	Carlito_syrichta
ENSRBIG00000029053	LSG1	95	76.236	ENSCAPG00000009856	LSG1	100	76.603	Cavia_aperea
ENSRBIG00000029053	LSG1	100	92.249	ENSCCAG00000035744	LSG1	100	92.249	Cebus_capucinus
ENSRBIG00000029053	LSG1	100	97.112	ENSCATG00000042060	LSG1	100	95.137	Cercocebus_atys
ENSRBIG00000029053	LSG1	100	97.720	ENSCSAG00000008796	LSG1	92	97.720	Chlorocebus_sabaeus
ENSRBIG00000029053	LSG1	99	68.563	ENSCPBG00000015941	LSG1	83	69.162	Chrysemys_picta_bellii
ENSRBIG00000029053	LSG1	66	63.158	ENSCING00000007079	-	91	63.158	Ciona_intestinalis
ENSRBIG00000029053	LSG1	75	55.372	ENSCSAVG00000002514	-	96	55.372	Ciona_savignyi
ENSRBIG00000029053	LSG1	100	97.416	ENSCANG00000030709	LSG1	100	97.416	Colobus_angolensis_palliatus
ENSRBIG00000029053	LSG1	100	81.515	ENSCGRG00001019846	Lsg1	100	81.970	Cricetulus_griseus_chok1gshd
ENSRBIG00000029053	LSG1	100	81.515	ENSCGRG00000014617	Lsg1	100	81.970	Cricetulus_griseus_crigri
ENSRBIG00000029053	LSG1	98	64.043	ENSCSEG00000008522	lsg1	99	63.086	Cynoglossus_semilaevis
ENSRBIG00000029053	LSG1	97	65.991	ENSCVAG00000002484	lsg1	99	66.667	Cyprinodon_variegatus
ENSRBIG00000029053	LSG1	99	67.123	ENSDARG00000015352	lsg1	99	67.275	Danio_rerio
ENSRBIG00000029053	LSG1	100	84.592	ENSDNOG00000006224	LSG1	100	84.290	Dasypus_novemcinctus
ENSRBIG00000029053	LSG1	84	57.851	FBgn0266284	Ns3	93	56.078	Drosophila_melanogaster
ENSRBIG00000029053	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSRBIG00000029053	LSG1	88	57.886	ENSEBUG00000003119	lsg1	85	56.694	Eptatretus_burgeri
ENSRBIG00000029053	LSG1	100	86.039	ENSEASG00005000678	LSG1	100	86.039	Equus_asinus_asinus
ENSRBIG00000029053	LSG1	100	86.343	ENSECAG00000017659	LSG1	100	86.343	Equus_caballus
ENSRBIG00000029053	LSG1	87	84.483	ENSEEUG00000015217	LSG1	87	84.483	Erinaceus_europaeus
ENSRBIG00000029053	LSG1	99	62.443	ENSELUG00000023973	lsg1	99	61.103	Esox_lucius
ENSRBIG00000029053	LSG1	99	84.802	ENSFCAG00000024957	LSG1	99	84.802	Felis_catus
ENSRBIG00000029053	LSG1	92	65.905	ENSFALG00000007210	LSG1	94	65.905	Ficedula_albicollis
ENSRBIG00000029053	LSG1	100	78.539	ENSFDAG00000017373	LSG1	100	78.571	Fukomys_damarensis
ENSRBIG00000029053	LSG1	97	64.969	ENSFHEG00000003680	lsg1	99	64.425	Fundulus_heteroclitus
ENSRBIG00000029053	LSG1	82	70.417	ENSGMOG00000015834	lsg1	88	69.180	Gadus_morhua
ENSRBIG00000029053	LSG1	99	63.691	ENSGALG00000007058	LSG1	87	62.202	Gallus_gallus
ENSRBIG00000029053	LSG1	97	65.938	ENSGAFG00000015831	lsg1	99	64.521	Gambusia_affinis
ENSRBIG00000029053	LSG1	98	62.980	ENSGACG00000009323	lsg1	99	62.651	Gasterosteus_aculeatus
ENSRBIG00000029053	LSG1	100	95.441	ENSGGOG00000000520	LSG1	100	95.441	Gorilla_gorilla
ENSRBIG00000029053	LSG1	99	63.293	ENSHBUG00000005659	lsg1	99	63.229	Haplochromis_burtoni
ENSRBIG00000029053	LSG1	100	76.284	ENSHGLG00000017390	LSG1	100	77.039	Heterocephalus_glaber_female
ENSRBIG00000029053	LSG1	100	76.284	ENSHGLG00100018587	LSG1	100	77.039	Heterocephalus_glaber_male
ENSRBIG00000029053	LSG1	97	64.297	ENSHCOG00000016848	lsg1	99	62.891	Hippocampus_comes
ENSRBIG00000029053	LSG1	99	65.204	ENSIPUG00000008631	lsg1	99	64.902	Ictalurus_punctatus
ENSRBIG00000029053	LSG1	89	80.825	ENSSTOG00000010234	LSG1	100	82.680	Ictidomys_tridecemlineatus
ENSRBIG00000029053	LSG1	100	80.665	ENSJJAG00000015513	Lsg1	100	80.665	Jaculus_jaculus
ENSRBIG00000029053	LSG1	98	63.043	ENSKMAG00000009681	lsg1	99	62.709	Kryptolebias_marmoratus
ENSRBIG00000029053	LSG1	98	62.364	ENSLBEG00000024261	lsg1	99	62.957	Labrus_bergylta
ENSRBIG00000029053	LSG1	99	65.913	ENSLACG00000013399	LSG1	99	65.913	Latimeria_chalumnae
ENSRBIG00000029053	LSG1	98	66.873	ENSLOCG00000004918	lsg1	99	65.658	Lepisosteus_oculatus
ENSRBIG00000029053	LSG1	100	82.701	ENSLAFG00000012919	-	100	82.701	Loxodonta_africana
ENSRBIG00000029053	LSG1	100	97.416	ENSMFAG00000039903	LSG1	100	95.441	Macaca_fascicularis
ENSRBIG00000029053	LSG1	100	97.568	ENSMMUG00000010708	LSG1	100	97.568	Macaca_mulatta
ENSRBIG00000029053	LSG1	100	97.264	ENSMNEG00000031538	LSG1	100	95.137	Macaca_nemestrina
ENSRBIG00000029053	LSG1	100	97.264	ENSMLEG00000041184	LSG1	100	97.264	Mandrillus_leucophaeus
ENSRBIG00000029053	LSG1	99	62.519	ENSMAMG00000000470	lsg1	99	61.469	Mastacembelus_armatus
ENSRBIG00000029053	LSG1	99	63.444	ENSMZEG00005017865	lsg1	99	63.378	Maylandia_zebra
ENSRBIG00000029053	LSG1	89	65.588	ENSMGAG00000007050	LSG1	99	64.298	Meleagris_gallopavo
ENSRBIG00000029053	LSG1	91	79.768	ENSMAUG00000016976	Lsg1	93	80.265	Mesocricetus_auratus
ENSRBIG00000029053	LSG1	100	85.888	ENSMICG00000049087	LSG1	100	85.888	Microcebus_murinus
ENSRBIG00000029053	LSG1	100	80.363	ENSMOCG00000022136	Lsg1	100	80.363	Microtus_ochrogaster
ENSRBIG00000029053	LSG1	82	72.848	ENSMMOG00000008884	lsg1	99	68.485	Mola_mola
ENSRBIG00000029053	LSG1	99	58.296	ENSMODG00000019828	LSG1	99	58.084	Monodelphis_domestica
ENSRBIG00000029053	LSG1	100	80.670	MGP_CAROLIEiJ_G0020648	Lsg1	100	80.880	Mus_caroli
ENSRBIG00000029053	LSG1	100	80.974	ENSMUSG00000022538	Lsg1	100	81.184	Mus_musculus
ENSRBIG00000029053	LSG1	98	81.453	MGP_PahariEiJ_G0016352	Lsg1	100	81.515	Mus_pahari
ENSRBIG00000029053	LSG1	100	80.974	MGP_SPRETEiJ_G0021544	Lsg1	100	81.184	Mus_spretus
ENSRBIG00000029053	LSG1	99	83.739	ENSMPUG00000003734	LSG1	99	83.739	Mustela_putorius_furo
ENSRBIG00000029053	LSG1	99	85.152	ENSMLUG00000012548	LSG1	99	85.152	Myotis_lucifugus
ENSRBIG00000029053	LSG1	100	81.184	ENSNGAG00000021872	Lsg1	100	81.184	Nannospalax_galili
ENSRBIG00000029053	LSG1	100	95.745	ENSNLEG00000008293	LSG1	100	95.745	Nomascus_leucogenys
ENSRBIG00000029053	LSG1	68	70.225	ENSMEUG00000009041	-	82	70.175	Notamacropus_eugenii
ENSRBIG00000029053	LSG1	99	63.293	ENSONIG00000002635	lsg1	99	63.056	Oreochromis_niloticus
ENSRBIG00000029053	LSG1	95	72.452	ENSOANG00000012742	LSG1	99	71.497	Ornithorhynchus_anatinus
ENSRBIG00000029053	LSG1	100	85.432	ENSOCUG00000004817	LSG1	100	85.432	Oryctolagus_cuniculus
ENSRBIG00000029053	LSG1	98	63.142	ENSORLG00000007695	lsg1	99	63.415	Oryzias_latipes
ENSRBIG00000029053	LSG1	98	62.675	ENSORLG00020016286	lsg1	99	62.822	Oryzias_latipes_hni
ENSRBIG00000029053	LSG1	98	63.608	ENSORLG00015012025	lsg1	99	63.262	Oryzias_latipes_hsok
ENSRBIG00000029053	LSG1	98	62.422	ENSOMEG00000022379	lsg1	99	62.405	Oryzias_melastigma
ENSRBIG00000029053	LSG1	100	85.952	ENSOGAG00000003475	LSG1	100	85.952	Otolemur_garnettii
ENSRBIG00000029053	LSG1	99	83.308	ENSOARG00000020403	LSG1	99	82.701	Ovis_aries
ENSRBIG00000029053	LSG1	100	94.529	ENSPPAG00000029271	LSG1	100	94.529	Pan_paniscus
ENSRBIG00000029053	LSG1	99	84.361	ENSPPRG00000010281	LSG1	99	84.361	Panthera_pardus
ENSRBIG00000029053	LSG1	99	85.106	ENSPTIG00000010789	LSG1	99	85.106	Panthera_tigris_altaica
ENSRBIG00000029053	LSG1	100	94.529	ENSPTRG00000015760	LSG1	100	94.529	Pan_troglodytes
ENSRBIG00000029053	LSG1	100	97.112	ENSPANG00000018249	LSG1	100	95.137	Papio_anubis
ENSRBIG00000029053	LSG1	96	64.678	ENSPKIG00000002895	lsg1	100	63.404	Paramormyrops_kingsleyae
ENSRBIG00000029053	LSG1	96	65.312	ENSPSIG00000009821	LSG1	99	64.531	Pelodiscus_sinensis
ENSRBIG00000029053	LSG1	95	64.912	ENSPMGG00000000931	lsg1	99	64.297	Periophthalmus_magnuspinnatus
ENSRBIG00000029053	LSG1	100	81.269	ENSPEMG00000012082	-	100	80.967	Peromyscus_maniculatus_bairdii
ENSRBIG00000029053	LSG1	99	59.275	ENSPMAG00000007451	lsg1	99	59.940	Petromyzon_marinus
ENSRBIG00000029053	LSG1	99	67.188	ENSPCIG00000013890	LSG1	82	67.188	Phascolarctos_cinereus
ENSRBIG00000029053	LSG1	97	66.102	ENSPFOG00000021882	lsg1	99	65.611	Poecilia_formosa
ENSRBIG00000029053	LSG1	97	64.869	ENSPLAG00000019536	lsg1	99	64.706	Poecilia_latipinna
ENSRBIG00000029053	LSG1	97	65.284	ENSPMEG00000017281	lsg1	99	64.812	Poecilia_mexicana
ENSRBIG00000029053	LSG1	97	55.300	ENSPREG00000006048	lsg1	99	55.556	Poecilia_reticulata
ENSRBIG00000029053	LSG1	92	94.399	ENSPPYG00000014425	LSG1	100	93.410	Pongo_abelii
ENSRBIG00000029053	LSG1	90	82.667	ENSPCAG00000005511	LSG1	90	82.667	Procavia_capensis
ENSRBIG00000029053	LSG1	100	87.709	ENSPCOG00000012360	LSG1	100	87.709	Propithecus_coquereli
ENSRBIG00000029053	LSG1	99	63.182	ENSPNYG00000021994	lsg1	99	62.334	Pundamilia_nyererei
ENSRBIG00000029053	LSG1	99	65.916	ENSPNAG00000015533	lsg1	99	65.658	Pygocentrus_nattereri
ENSRBIG00000029053	LSG1	100	81.297	ENSRNOG00000001727	Lsg1	100	81.297	Rattus_norvegicus
ENSRBIG00000029053	LSG1	100	99.848	ENSRROG00000037702	LSG1	100	99.848	Rhinopithecus_roxellana
ENSRBIG00000029053	LSG1	75	46.552	YGL099W	LSG1	68	58.683	Saccharomyces_cerevisiae
ENSRBIG00000029053	LSG1	100	93.313	ENSSBOG00000034938	LSG1	100	93.313	Saimiri_boliviensis_boliviensis
ENSRBIG00000029053	LSG1	78	66.604	ENSSHAG00000003487	LSG1	99	65.784	Sarcophilus_harrisii
ENSRBIG00000029053	LSG1	98	64.551	ENSSFOG00015008955	lsg1	99	63.008	Scleropages_formosus
ENSRBIG00000029053	LSG1	98	63.344	ENSSDUG00000004622	lsg1	99	64.242	Seriola_dumerili
ENSRBIG00000029053	LSG1	98	63.608	ENSSLDG00000010869	lsg1	99	63.720	Seriola_lalandi_dorsalis
ENSRBIG00000029053	LSG1	81	83.824	ENSSARG00000012981	LSG1	81	83.824	Sorex_araneus
ENSRBIG00000029053	LSG1	99	66.916	ENSSPUG00000016347	LSG1	99	66.517	Sphenodon_punctatus
ENSRBIG00000029053	LSG1	99	62.519	ENSSPAG00000005508	lsg1	99	62.974	Stegastes_partitus
ENSRBIG00000029053	LSG1	99	83.587	ENSSSCG00000011827	LSG1	99	82.827	Sus_scrofa
ENSRBIG00000029053	LSG1	89	63.621	ENSTGUG00000009068	LSG1	99	63.621	Taeniopygia_guttata
ENSRBIG00000029053	LSG1	97	60.312	ENSTRUG00000017380	lsg1	99	60.671	Takifugu_rubripes
ENSRBIG00000029053	LSG1	97	63.665	ENSTNIG00000015570	lsg1	99	63.540	Tetraodon_nigroviridis
ENSRBIG00000029053	LSG1	99	76.783	ENSTTRG00000000559	LSG1	99	75.873	Tursiops_truncatus
ENSRBIG00000029053	LSG1	99	82.827	ENSUAMG00000012454	LSG1	99	82.827	Ursus_americanus
ENSRBIG00000029053	LSG1	99	82.827	ENSUMAG00000000855	LSG1	99	82.827	Ursus_maritimus
ENSRBIG00000029053	LSG1	95	80.160	ENSVPAG00000012400	LSG1	99	80.160	Vicugna_pacos
ENSRBIG00000029053	LSG1	95	83.200	ENSVVUG00000008956	LSG1	97	83.200	Vulpes_vulpes
ENSRBIG00000029053	LSG1	99	65.663	ENSXETG00000003451	lsg1	99	65.692	Xenopus_tropicalis
ENSRBIG00000029053	LSG1	97	65.062	ENSXCOG00000003239	lsg1	99	64.307	Xiphophorus_couchianus
ENSRBIG00000029053	LSG1	97	64.806	ENSXMAG00000005536	lsg1	99	64.404	Xiphophorus_maculatus