EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000029088 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 6684 bases
Position: chrMCGX01017860.1:24320-31003
Accession: 108520477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000010477	APOBEC_N	PF08210.11	9.3e-36	1	1
ENSRBIP00000010473	APOBEC_N	PF08210.11	1.1e-35	1	1
ENSRBIP00000010482	APOBEC_N	PF08210.11	1.3e-27	1	1
ENSRBIP00000010477	APOBEC_C	PF05240.14	4.6e-26	1	1
ENSRBIP00000010473	APOBEC_C	PF05240.14	4.8e-26	1	1
ENSRBIP00000010482	APOBEC_C	PF05240.14	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000034107	APOBEC3H-202	603	-	ENSRBIP00000010477	200 (aa)	-	A0A2K6KGS1
ENSRBIT00000034112	APOBEC3H-203	465	-	ENSRBIP00000010482	154 (aa)	-	A0A2K6KGS6
ENSRBIT00000034102	APOBEC3H-201	1119	XM_017859885	ENSRBIP00000010473	211 (aa)	XP_017715374	A0A2K6KGT6

Gene Model

Click here to download ENSRBIG00000029088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000029088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000029088	APOBEC3H	89	36.082	ENSRBIG00000042829	-	97	36.082
ENSRBIG00000029088	APOBEC3H	65	31.298	ENSRBIG00000031161	APOBEC1	54	31.298
ENSRBIG00000029088	APOBEC3H	97	34.694	ENSRBIG00000030834	-	94	34.392
ENSRBIG00000029088	APOBEC3H	92	35.570	ENSRBIG00000030323	-	94	36.842
ENSRBIG00000029088	APOBEC3H	93	32.836	ENSRBIG00000026659	AICDA	98	32.836
ENSRBIG00000029088	APOBEC3H	89	38.261	ENSRBIG00000035436	APOBEC3G	86	38.261
ENSRBIG00000029088	APOBEC3H	96	38.037	ENSRBIG00000042297	-	92	38.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000029088	APOBEC3H	100	81.818	ENSG00000100298	APOBEC3H	100	81.967	Homo_sapiens
ENSRBIG00000029088	APOBEC3H	94	49.754	ENSAMEG00000010818	-	80	49.754	Ailuropoda_melanoleuca
ENSRBIG00000029088	APOBEC3H	94	73.267	ENSANAG00000025410	APOBEC3H	96	72.093	Aotus_nancymaae
ENSRBIG00000029088	APOBEC3H	99	51.111	ENSBTAG00000007755	APOBEC3H	94	51.111	Bos_taurus
ENSRBIG00000029088	APOBEC3H	100	74.000	ENSCJAG00000012524	APOBEC3H	100	74.000	Callithrix_jacchus
ENSRBIG00000029088	APOBEC3H	97	45.876	ENSCAFG00000001361	APOBEC3Z3	100	47.980	Canis_familiaris
ENSRBIG00000029088	APOBEC3H	95	47.619	ENSCAFG00020002584	-	95	47.619	Canis_lupus_dingo
ENSRBIG00000029088	APOBEC3H	99	49.730	ENSCHIG00000026580	-	98	49.730	Capra_hircus
ENSRBIG00000029088	APOBEC3H	99	48.026	ENSTSYG00000032894	-	100	50.562	Carlito_syrichta
ENSRBIG00000029088	APOBEC3H	99	54.106	ENSCPOG00000009257	-	93	54.106	Cavia_porcellus
ENSRBIG00000029088	APOBEC3H	100	72.611	ENSCCAG00000008525	APOBEC3H	100	72.611	Cebus_capucinus
ENSRBIG00000029088	APOBEC3H	100	90.000	ENSCATG00000030302	APOBEC3H	100	90.000	Cercocebus_atys
ENSRBIG00000029088	APOBEC3H	95	54.500	ENSCLAG00000016615	-	98	54.500	Chinchilla_lanigera
ENSRBIG00000029088	APOBEC3H	100	88.626	ENSCSAG00000006371	APOBEC3H	100	88.626	Chlorocebus_sabaeus
ENSRBIG00000029088	APOBEC3H	95	51.724	ENSCGRG00001022976	Apobec3	92	51.724	Cricetulus_griseus_chok1gshd
ENSRBIG00000029088	APOBEC3H	95	51.724	ENSCGRG00000005621	Apobec3	92	51.724	Cricetulus_griseus_crigri
ENSRBIG00000029088	APOBEC3H	91	53.793	ENSDORG00000027271	-	99	42.857	Dipodomys_ordii
ENSRBIG00000029088	APOBEC3H	94	51.000	ENSECAG00000007726	APOBEC3H	85	51.000	Equus_caballus
ENSRBIG00000029088	APOBEC3H	94	50.754	ENSFCAG00000005251	APOBEC3Z3	99	50.000	Felis_catus
ENSRBIG00000029088	APOBEC3H	91	57.143	ENSSTOG00000007125	-	85	54.444	Ictidomys_tridecemlineatus
ENSRBIG00000029088	APOBEC3H	92	50.694	ENSJJAG00000016840	-	74	51.471	Jaculus_jaculus
ENSRBIG00000029088	APOBEC3H	94	51.685	ENSLAFG00000027404	-	96	51.685	Loxodonta_africana
ENSRBIG00000029088	APOBEC3H	100	90.521	ENSMFAG00000031827	APOBEC3H	100	90.521	Macaca_fascicularis
ENSRBIG00000029088	APOBEC3H	100	90.909	ENSMMUG00000001016	APOBEC3H	100	90.909	Macaca_mulatta
ENSRBIG00000029088	APOBEC3H	100	91.000	ENSMNEG00000039259	APOBEC3H	100	91.000	Macaca_nemestrina
ENSRBIG00000029088	APOBEC3H	100	91.000	ENSMLEG00000033417	APOBEC3H	100	91.000	Mandrillus_leucophaeus
ENSRBIG00000029088	APOBEC3H	95	50.490	ENSMAUG00000011683	Apobec3	88	50.490	Mesocricetus_auratus
ENSRBIG00000029088	APOBEC3H	94	49.749	ENSMOCG00000021576	Apobec3	80	50.251	Microtus_ochrogaster
ENSRBIG00000029088	APOBEC3H	95	48.020	MGP_CAROLIEiJ_G0020029	Apobec3	93	48.020	Mus_caroli
ENSRBIG00000029088	APOBEC3H	96	47.590	ENSMUSG00000009585	Apobec3	97	49.485	Mus_musculus
ENSRBIG00000029088	APOBEC3H	95	48.293	MGP_PahariEiJ_G0020031	-	88	48.293	Mus_pahari
ENSRBIG00000029088	APOBEC3H	96	46.961	MGP_SPRETEiJ_G0020927	Apobec3	98	40.476	Mus_spretus
ENSRBIG00000029088	APOBEC3H	94	48.485	ENSMPUG00000013239	-	75	48.485	Mustela_putorius_furo
ENSRBIG00000029088	APOBEC3H	96	47.500	ENSNGAG00000018998	Apobec3	100	47.500	Nannospalax_galili
ENSRBIG00000029088	APOBEC3H	100	85.782	ENSNLEG00000015218	-	100	85.782	Nomascus_leucogenys
ENSRBIG00000029088	APOBEC3H	92	42.553	ENSOCUG00000023913	-	89	42.021	Oryctolagus_cuniculus
ENSRBIG00000029088	APOBEC3H	99	50.000	ENSOARG00000016290	APOBEC3F	97	50.000	Ovis_aries
ENSRBIG00000029088	APOBEC3H	100	81.500	ENSPPAG00000036522	APOBEC3H	100	81.500	Pan_paniscus
ENSRBIG00000029088	APOBEC3H	89	38.356	ENSPPRG00000003675	-	81	38.994	Panthera_pardus
ENSRBIG00000029088	APOBEC3H	94	50.251	ENSPPRG00000003941	-	99	50.251	Panthera_pardus
ENSRBIG00000029088	APOBEC3H	94	50.251	ENSPTIG00000010283	-	99	50.251	Panthera_tigris_altaica
ENSRBIG00000029088	APOBEC3H	100	81.500	ENSPTRG00000014390	APOBEC3H	100	81.500	Pan_troglodytes
ENSRBIG00000029088	APOBEC3H	100	90.521	ENSPANG00000010774	APOBEC3H	100	90.521	Papio_anubis
ENSRBIG00000029088	APOBEC3H	96	46.602	ENSPEMG00000000456	Apobec3	83	46.602	Peromyscus_maniculatus_bairdii
ENSRBIG00000029088	APOBEC3H	95	85.572	ENSPPYG00000011834	-	100	84.360	Pongo_abelii
ENSRBIG00000029088	APOBEC3H	89	43.820	ENSPCAG00000015655	-	99	43.889	Procavia_capensis
ENSRBIG00000029088	APOBEC3H	64	36.719	ENSPVAG00000024161	-	94	36.719	Pteropus_vampyrus
ENSRBIG00000029088	APOBEC3H	87	52.985	ENSPVAG00000009462	-	98	50.562	Pteropus_vampyrus
ENSRBIG00000029088	APOBEC3H	65	35.385	ENSPVAG00000024267	-	95	35.385	Pteropus_vampyrus
ENSRBIG00000029088	APOBEC3H	91	49.189	ENSRNOG00000016852	Apobec3	86	49.198	Rattus_norvegicus
ENSRBIG00000029088	APOBEC3H	100	98.701	ENSRROG00000024699	APOBEC3H	100	98.701	Rhinopithecus_roxellana
ENSRBIG00000029088	APOBEC3H	98	65.865	ENSSBOG00000030005	APOBEC3H	100	71.585	Saimiri_boliviensis_boliviensis
ENSRBIG00000029088	APOBEC3H	97	55.147	ENSSSCG00000000091	APOBEC3B	92	52.133	Sus_scrofa
ENSRBIG00000029088	APOBEC3H	86	56.061	ENSTBEG00000001532	-	98	54.070	Tupaia_belangeri
ENSRBIG00000029088	APOBEC3H	88	54.412	ENSTTRG00000001266	-	99	51.111	Tursiops_truncatus
ENSRBIG00000029088	APOBEC3H	90	51.034	ENSUAMG00000004427	-	83	49.733	Ursus_americanus
ENSRBIG00000029088	APOBEC3H	94	52.020	ENSUMAG00000014435	-	99	52.020	Ursus_maritimus
ENSRBIG00000029088	APOBEC3H	65	56.154	ENSVPAG00000011108	-	98	56.154	Vicugna_pacos