EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000029409 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 34165 bases
Position: chrMCGX01003374.1:2617784-2651948
Accession: 108531559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000011179	zf-C3HC	PF07967.13	6.2e-38	1	1
ENSRBIP00000011134	zf-C3HC	PF07967.13	1.9e-36	1	1
ENSRBIP00000011185	zf-C3HC	PF07967.13	5.3e-10	1	1
ENSRBIP00000011185	Rsm1	PF08600.10	1.9e-16	1	1
ENSRBIP00000011134	Rsm1	PF08600.10	2.7e-15	1	1
ENSRBIP00000011179	Rsm1	PF08600.10	8.5e-15	1	2
ENSRBIP00000011179	Rsm1	PF08600.10	8.5e-15	2	2
ENSRBIP00000011187	Rsm1	PF08600.10	0.0003	1	1
ENSRBIP00000011145	Rsm1	PF08600.10	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000034777	ZC3HC1-201	2086	XM_017875048	ENSRBIP00000011134	453 (aa)	XP_017730537	A0A2K6KIQ3
ENSRBIT00000034828	ZC3HC1-203	1149	-	ENSRBIP00000011179	382 (aa)	-	A0A2K6KIU5
ENSRBIT00000034790	ZC3HC1-202	2362	-	ENSRBIP00000011145	212 (aa)	-	A0A2K6KIQ2
ENSRBIT00000034834	ZC3HC1-204	1116	XM_017875049	ENSRBIP00000011185	371 (aa)	XP_017730538	A0A2K6KIT9
ENSRBIT00000034837	ZC3HC1-205	627	-	ENSRBIP00000011187	208 (aa)	-	A0A2K6KIV2

Gene Model

Click here to download ENSRBIG00000029409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000029409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000029409	ZC3HC1	99	98.688	ENSG00000091732	ZC3HC1	94	98.673	Homo_sapiens
ENSRBIG00000029409	ZC3HC1	94	49.310	ENSAPOG00000009078	zc3hc1	87	44.420	Acanthochromis_polyacanthus
ENSRBIG00000029409	ZC3HC1	100	90.989	ENSAMEG00000005425	ZC3HC1	90	90.989	Ailuropoda_melanoleuca
ENSRBIG00000029409	ZC3HC1	92	50.000	ENSACIG00000019513	zc3hc1	87	44.150	Amphilophus_citrinellus
ENSRBIG00000029409	ZC3HC1	94	49.655	ENSAOCG00000024310	zc3hc1	87	44.643	Amphiprion_ocellaris
ENSRBIG00000029409	ZC3HC1	94	49.655	ENSAPEG00000004907	zc3hc1	87	45.455	Amphiprion_percula
ENSRBIG00000029409	ZC3HC1	88	50.690	ENSATEG00000016898	zc3hc1	85	46.479	Anabas_testudineus
ENSRBIG00000029409	ZC3HC1	98	60.674	ENSAPLG00000003832	ZC3HC1	99	60.674	Anas_platyrhynchos
ENSRBIG00000029409	ZC3HC1	100	60.907	ENSACAG00000001638	ZC3HC1	90	60.907	Anolis_carolinensis
ENSRBIG00000029409	ZC3HC1	100	96.635	ENSANAG00000022213	ZC3HC1	100	96.635	Aotus_nancymaae
ENSRBIG00000029409	ZC3HC1	94	48.097	ENSACLG00000025033	zc3hc1	94	44.000	Astatotilapia_calliptera
ENSRBIG00000029409	ZC3HC1	93	48.571	ENSAMXG00000036792	zc3hc1	88	45.642	Astyanax_mexicanus
ENSRBIG00000029409	ZC3HC1	100	91.611	ENSBTAG00000011247	ZC3HC1	90	91.611	Bos_taurus
ENSRBIG00000029409	ZC3HC1	100	96.154	ENSCJAG00000010536	ZC3HC1	100	96.154	Callithrix_jacchus
ENSRBIG00000029409	ZC3HC1	100	92.715	ENSCAFG00000029401	-	89	92.715	Canis_familiaris
ENSRBIG00000029409	ZC3HC1	100	92.936	ENSCAFG00000031850	-	90	92.936	Canis_familiaris
ENSRBIG00000029409	ZC3HC1	100	92.763	ENSCAFG00000001499	-	89	92.763	Canis_familiaris
ENSRBIG00000029409	ZC3HC1	100	92.715	ENSCAFG00000028735	-	90	92.715	Canis_familiaris
ENSRBIG00000029409	ZC3HC1	100	92.715	ENSCAFG00020006829	-	90	92.715	Canis_lupus_dingo
ENSRBIG00000029409	ZC3HC1	100	91.648	ENSCAFG00020023333	-	90	91.648	Canis_lupus_dingo
ENSRBIG00000029409	ZC3HC1	100	88.208	ENSCHIG00000014103	ZC3HC1	90	84.106	Capra_hircus
ENSRBIG00000029409	ZC3HC1	100	90.508	ENSTSYG00000002843	ZC3HC1	90	90.508	Carlito_syrichta
ENSRBIG00000029409	ZC3HC1	100	79.717	ENSCAPG00000016300	ZC3HC1	93	79.769	Cavia_aperea
ENSRBIG00000029409	ZC3HC1	100	86.649	ENSCPOG00000014034	ZC3HC1	89	86.649	Cavia_porcellus
ENSRBIG00000029409	ZC3HC1	100	96.635	ENSCCAG00000020384	ZC3HC1	100	96.635	Cebus_capucinus
ENSRBIG00000029409	ZC3HC1	100	99.338	ENSCATG00000023130	ZC3HC1	99	97.587	Cercocebus_atys
ENSRBIG00000029409	ZC3HC1	94	85.204	ENSCLAG00000008260	ZC3HC1	88	65.133	Chinchilla_lanigera
ENSRBIG00000029409	ZC3HC1	100	98.113	ENSCSAG00000009881	ZC3HC1	99	97.319	Chlorocebus_sabaeus
ENSRBIG00000029409	ZC3HC1	99	90.687	ENSCHOG00000011846	ZC3HC1	99	90.687	Choloepus_hoffmanni
ENSRBIG00000029409	ZC3HC1	100	68.571	ENSCPBG00000017519	ZC3HC1	91	68.571	Chrysemys_picta_bellii
ENSRBIG00000029409	ZC3HC1	100	99.558	ENSCANG00000029091	ZC3HC1	100	99.519	Colobus_angolensis_palliatus
ENSRBIG00000029409	ZC3HC1	100	87.638	ENSCGRG00001018805	Zc3hc1	90	87.638	Cricetulus_griseus_chok1gshd
ENSRBIG00000029409	ZC3HC1	100	87.264	ENSCGRG00000017114	Zc3hc1	90	86.313	Cricetulus_griseus_crigri
ENSRBIG00000029409	ZC3HC1	95	46.000	ENSCSEG00000009284	zc3hc1	85	45.333	Cynoglossus_semilaevis
ENSRBIG00000029409	ZC3HC1	93	46.959	ENSCVAG00000011566	zc3hc1	86	42.539	Cyprinodon_variegatus
ENSRBIG00000029409	ZC3HC1	94	48.402	ENSDARG00000062651	zc3hc1	86	47.717	Danio_rerio
ENSRBIG00000029409	ZC3HC1	100	90.066	ENSDNOG00000045016	ZC3HC1	90	90.066	Dasypus_novemcinctus
ENSRBIG00000029409	ZC3HC1	100	83.019	ENSDORG00000008697	Zc3hc1	90	85.817	Dipodomys_ordii
ENSRBIG00000029409	ZC3HC1	99	92.699	ENSEASG00005008789	ZC3HC1	97	92.699	Equus_asinus_asinus
ENSRBIG00000029409	ZC3HC1	99	93.142	ENSECAG00000017886	ZC3HC1	90	93.142	Equus_caballus
ENSRBIG00000029409	ZC3HC1	76	87.500	ENSEEUG00000003123	ZC3HC1	67	84.568	Erinaceus_europaeus
ENSRBIG00000029409	ZC3HC1	97	44.612	ENSELUG00000023168	zc3hc1	86	46.460	Esox_lucius
ENSRBIG00000029409	ZC3HC1	100	91.623	ENSFCAG00000010429	ZC3HC1	96	90.287	Felis_catus
ENSRBIG00000029409	ZC3HC1	100	60.897	ENSFALG00000005006	ZC3HC1	100	60.897	Ficedula_albicollis
ENSRBIG00000029409	ZC3HC1	100	88.482	ENSFDAG00000019897	ZC3HC1	90	88.079	Fukomys_damarensis
ENSRBIG00000029409	ZC3HC1	95	47.635	ENSFHEG00000020149	zc3hc1	87	43.274	Fundulus_heteroclitus
ENSRBIG00000029409	ZC3HC1	97	48.454	ENSGMOG00000002914	zc3hc1	90	43.142	Gadus_morhua
ENSRBIG00000029409	ZC3HC1	99	64.407	ENSGALG00000008003	ZC3HC1	91	64.018	Gallus_gallus
ENSRBIG00000029409	ZC3HC1	98	46.429	ENSGAFG00000016095	zc3hc1	89	43.818	Gambusia_affinis
ENSRBIG00000029409	ZC3HC1	95	50.847	ENSGACG00000019706	zc3hc1	87	47.566	Gasterosteus_aculeatus
ENSRBIG00000029409	ZC3HC1	98	67.760	ENSGAGG00000016106	ZC3HC1	100	69.054	Gopherus_agassizii
ENSRBIG00000029409	ZC3HC1	99	98.578	ENSGGOG00000015504	ZC3HC1	99	98.551	Gorilla_gorilla
ENSRBIG00000029409	ZC3HC1	94	48.443	ENSHBUG00000008347	zc3hc1	87	44.444	Haplochromis_burtoni
ENSRBIG00000029409	ZC3HC1	100	89.625	ENSHGLG00000005085	ZC3HC1	90	89.625	Heterocephalus_glaber_female
ENSRBIG00000029409	ZC3HC1	100	89.404	ENSHGLG00100011395	ZC3HC1	90	89.404	Heterocephalus_glaber_male
ENSRBIG00000029409	ZC3HC1	94	44.165	ENSHCOG00000014309	zc3hc1	86	44.064	Hippocampus_comes
ENSRBIG00000029409	ZC3HC1	100	91.038	ENSSTOG00000023599	-	90	90.949	Ictidomys_tridecemlineatus
ENSRBIG00000029409	ZC3HC1	93	51.087	ENSKMAG00000015315	zc3hc1	80	44.295	Kryptolebias_marmoratus
ENSRBIG00000029409	ZC3HC1	94	48.852	ENSLBEG00000017325	zc3hc1	92	45.374	Labrus_bergylta
ENSRBIG00000029409	ZC3HC1	79	57.258	ENSLACG00000013032	ZC3HC1	88	57.258	Latimeria_chalumnae
ENSRBIG00000029409	ZC3HC1	93	58.484	ENSLOCG00000015963	zc3hc1	86	54.795	Lepisosteus_oculatus
ENSRBIG00000029409	ZC3HC1	100	89.934	ENSLAFG00000001292	ZC3HC1	90	89.934	Loxodonta_africana
ENSRBIG00000029409	ZC3HC1	100	99.215	ENSMFAG00000030176	ZC3HC1	98	98.370	Macaca_fascicularis
ENSRBIG00000029409	ZC3HC1	100	99.215	ENSMMUG00000006155	ZC3HC1	99	98.901	Macaca_mulatta
ENSRBIG00000029409	ZC3HC1	100	99.476	ENSMNEG00000011833	ZC3HC1	100	98.585	Macaca_nemestrina
ENSRBIG00000029409	ZC3HC1	100	99.558	ENSMLEG00000027328	ZC3HC1	100	99.038	Mandrillus_leucophaeus
ENSRBIG00000029409	ZC3HC1	94	49.658	ENSMAMG00000010691	zc3hc1	87	45.254	Mastacembelus_armatus
ENSRBIG00000029409	ZC3HC1	94	48.097	ENSMZEG00005007142	zc3hc1	87	44.222	Maylandia_zebra
ENSRBIG00000029409	ZC3HC1	99	65.203	ENSMGAG00000002977	ZC3HC1	91	64.333	Meleagris_gallopavo
ENSRBIG00000029409	ZC3HC1	100	85.849	ENSMAUG00000017032	Zc3hc1	92	81.687	Mesocricetus_auratus
ENSRBIG00000029409	ZC3HC1	100	93.717	ENSMICG00000009167	ZC3HC1	90	93.598	Microcebus_murinus
ENSRBIG00000029409	ZC3HC1	100	86.534	ENSMOCG00000015239	Zc3hc1	90	86.534	Microtus_ochrogaster
ENSRBIG00000029409	ZC3HC1	90	53.540	ENSMMOG00000002204	zc3hc1	99	41.978	Mola_mola
ENSRBIG00000029409	ZC3HC1	100	71.698	ENSMODG00000014630	ZC3HC1	90	63.907	Monodelphis_domestica
ENSRBIG00000029409	ZC3HC1	93	50.329	ENSMALG00000014447	zc3hc1	87	46.563	Monopterus_albus
ENSRBIG00000029409	ZC3HC1	100	87.196	MGP_CAROLIEiJ_G0028183	Zc3hc1	90	87.196	Mus_caroli
ENSRBIG00000029409	ZC3HC1	100	86.976	ENSMUSG00000039130	Zc3hc1	90	86.976	Mus_musculus
ENSRBIG00000029409	ZC3HC1	100	85.377	MGP_PahariEiJ_G0021941	Zc3hc1	90	80.795	Mus_pahari
ENSRBIG00000029409	ZC3HC1	100	87.173	MGP_SPRETEiJ_G0029183	Zc3hc1	90	86.976	Mus_spretus
ENSRBIG00000029409	ZC3HC1	95	90.698	ENSMPUG00000005297	ZC3HC1	85	90.698	Mustela_putorius_furo
ENSRBIG00000029409	ZC3HC1	100	89.912	ENSMLUG00000000063	-	90	89.912	Myotis_lucifugus
ENSRBIG00000029409	ZC3HC1	99	79.907	ENSMLUG00000029228	-	99	84.548	Myotis_lucifugus
ENSRBIG00000029409	ZC3HC1	100	87.885	ENSNGAG00000019014	Zc3hc1	90	87.885	Nannospalax_galili
ENSRBIG00000029409	ZC3HC1	94	48.789	ENSNBRG00000004577	zc3hc1	87	44.543	Neolamprologus_brichardi
ENSRBIG00000029409	ZC3HC1	99	97.638	ENSNLEG00000012698	ZC3HC1	97	97.521	Nomascus_leucogenys
ENSRBIG00000029409	ZC3HC1	100	79.912	ENSMEUG00000011023	ZC3HC1	90	79.912	Notamacropus_eugenii
ENSRBIG00000029409	ZC3HC1	73	81.340	ENSOPRG00000007867	-	58	81.340	Ochotona_princeps
ENSRBIG00000029409	ZC3HC1	100	84.547	ENSODEG00000014604	ZC3HC1	90	84.327	Octodon_degus
ENSRBIG00000029409	ZC3HC1	98	47.097	ENSONIG00000011644	zc3hc1	91	43.949	Oreochromis_niloticus
ENSRBIG00000029409	ZC3HC1	100	69.397	ENSOANG00000011460	ZC3HC1	100	69.397	Ornithorhynchus_anatinus
ENSRBIG00000029409	ZC3HC1	100	87.584	ENSOCUG00000017137	ZC3HC1	90	86.623	Oryctolagus_cuniculus
ENSRBIG00000029409	ZC3HC1	93	50.000	ENSORLG00000014409	zc3hc1	85	44.295	Oryzias_latipes
ENSRBIG00000029409	ZC3HC1	93	50.350	ENSORLG00020015874	zc3hc1	85	45.212	Oryzias_latipes_hni
ENSRBIG00000029409	ZC3HC1	93	50.000	ENSORLG00015014641	zc3hc1	85	44.989	Oryzias_latipes_hsok
ENSRBIG00000029409	ZC3HC1	93	50.709	ENSOMEG00000020604	zc3hc1	87	46.053	Oryzias_melastigma
ENSRBIG00000029409	ZC3HC1	94	47.717	ENSOMEG00000000215	zc3hc1	87	46.053	Oryzias_melastigma
ENSRBIG00000029409	ZC3HC1	98	93.681	ENSOGAG00000026193	ZC3HC1	90	86.976	Otolemur_garnettii
ENSRBIG00000029409	ZC3HC1	100	91.228	ENSOARG00000004907	ZC3HC1	89	91.228	Ovis_aries
ENSRBIG00000029409	ZC3HC1	99	98.688	ENSPPAG00000043172	ZC3HC1	99	98.551	Pan_paniscus
ENSRBIG00000029409	ZC3HC1	100	92.440	ENSPPRG00000001004	ZC3HC1	96	89.404	Panthera_pardus
ENSRBIG00000029409	ZC3HC1	100	91.391	ENSPTIG00000007823	ZC3HC1	96	90.066	Panthera_tigris_altaica
ENSRBIG00000029409	ZC3HC1	99	98.578	ENSPTRG00000019685	ZC3HC1	99	98.551	Pan_troglodytes
ENSRBIG00000029409	ZC3HC1	100	99.215	ENSPANG00000014229	ZC3HC1	100	99.038	Papio_anubis
ENSRBIG00000029409	ZC3HC1	93	52.416	ENSPKIG00000007172	zc3hc1	86	49.654	Paramormyrops_kingsleyae
ENSRBIG00000029409	ZC3HC1	100	68.794	ENSPSIG00000016646	ZC3HC1	91	62.907	Pelodiscus_sinensis
ENSRBIG00000029409	ZC3HC1	98	40.340	ENSPMGG00000003548	zc3hc1	89	44.595	Periophthalmus_magnuspinnatus
ENSRBIG00000029409	ZC3HC1	100	86.976	ENSPEMG00000000514	Zc3hc1	90	86.976	Peromyscus_maniculatus_bairdii
ENSRBIG00000029409	ZC3HC1	100	76.821	ENSPCIG00000020619	ZC3HC1	100	78.663	Phascolarctos_cinereus
ENSRBIG00000029409	ZC3HC1	98	46.429	ENSPFOG00000003466	zc3hc1	89	43.818	Poecilia_formosa
ENSRBIG00000029409	ZC3HC1	98	46.429	ENSPLAG00000022211	zc3hc1	89	43.601	Poecilia_latipinna
ENSRBIG00000029409	ZC3HC1	98	46.429	ENSPMEG00000001458	zc3hc1	90	43.287	Poecilia_mexicana
ENSRBIG00000029409	ZC3HC1	98	44.444	ENSPREG00000004004	zc3hc1	89	43.818	Poecilia_reticulata
ENSRBIG00000029409	ZC3HC1	99	95.735	ENSPPYG00000017998	ZC3HC1	90	88.546	Pongo_abelii
ENSRBIG00000029409	ZC3HC1	100	86.755	ENSPCAG00000001182	ZC3HC1	98	86.755	Procavia_capensis
ENSRBIG00000029409	ZC3HC1	100	94.503	ENSPCOG00000017354	ZC3HC1	90	94.481	Propithecus_coquereli
ENSRBIG00000029409	ZC3HC1	100	89.623	ENSPVAG00000003195	ZC3HC1	90	85.210	Pteropus_vampyrus
ENSRBIG00000029409	ZC3HC1	94	48.097	ENSPNYG00000020692	zc3hc1	87	44.222	Pundamilia_nyererei
ENSRBIG00000029409	ZC3HC1	94	46.101	ENSPNAG00000020746	zc3hc1	87	45.872	Pygocentrus_nattereri
ENSRBIG00000029409	ZC3HC1	100	86.123	ENSRNOG00000010154	Zc3hc1	90	86.123	Rattus_norvegicus
ENSRBIG00000029409	ZC3HC1	100	100.000	ENSRROG00000041831	ZC3HC1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000029409	ZC3HC1	100	97.115	ENSSBOG00000032787	ZC3HC1	100	97.115	Saimiri_boliviensis_boliviensis
ENSRBIG00000029409	ZC3HC1	100	79.032	ENSSHAG00000002529	ZC3HC1	98	78.901	Sarcophilus_harrisii
ENSRBIG00000029409	ZC3HC1	99	52.113	ENSSFOG00015003667	zc3hc1	85	49.567	Scleropages_formosus
ENSRBIG00000029409	ZC3HC1	85	56.195	ENSSMAG00000000647	zc3hc1	78	45.575	Scophthalmus_maximus
ENSRBIG00000029409	ZC3HC1	91	52.158	ENSSDUG00000004241	zc3hc1	85	46.325	Seriola_dumerili
ENSRBIG00000029409	ZC3HC1	91	51.079	ENSSLDG00000025056	zc3hc1	85	45.880	Seriola_lalandi_dorsalis
ENSRBIG00000029409	ZC3HC1	100	79.717	ENSSARG00000012013	ZC3HC1	90	78.146	Sorex_araneus
ENSRBIG00000029409	ZC3HC1	95	57.011	ENSSPUG00000000778	ZC3HC1	86	57.011	Sphenodon_punctatus
ENSRBIG00000029409	ZC3HC1	98	47.152	ENSSPAG00000020041	zc3hc1	92	44.654	Stegastes_partitus
ENSRBIG00000029409	ZC3HC1	100	91.170	ENSSSCG00000016565	ZC3HC1	100	90.746	Sus_scrofa
ENSRBIG00000029409	ZC3HC1	92	63.542	ENSTGUG00000016262	ZC3HC1	100	59.350	Taeniopygia_guttata
ENSRBIG00000029409	ZC3HC1	99	50.523	ENSTRUG00000020077	zc3hc1	90	43.629	Takifugu_rubripes
ENSRBIG00000029409	ZC3HC1	95	51.049	ENSTNIG00000007585	zc3hc1	92	45.536	Tetraodon_nigroviridis
ENSRBIG00000029409	ZC3HC1	99	90.995	ENSTBEG00000005216	ZC3HC1	90	81.416	Tupaia_belangeri
ENSRBIG00000029409	ZC3HC1	100	92.123	ENSTTRG00000008458	ZC3HC1	95	91.410	Tursiops_truncatus
ENSRBIG00000029409	ZC3HC1	100	91.611	ENSUAMG00000020249	ZC3HC1	90	91.611	Ursus_americanus
ENSRBIG00000029409	ZC3HC1	100	91.170	ENSUMAG00000009268	ZC3HC1	90	91.170	Ursus_maritimus
ENSRBIG00000029409	ZC3HC1	89	91.837	ENSVPAG00000010846	ZC3HC1	67	91.837	Vicugna_pacos
ENSRBIG00000029409	ZC3HC1	95	92.575	ENSVVUG00000012386	ZC3HC1	89	92.575	Vulpes_vulpes
ENSRBIG00000029409	ZC3HC1	95	51.716	ENSXETG00000033900	zc3hc1	89	51.716	Xenopus_tropicalis
ENSRBIG00000029409	ZC3HC1	98	44.416	ENSXCOG00000013570	zc3hc1	95	43.636	Xiphophorus_couchianus
ENSRBIG00000029409	ZC3HC1	98	46.753	ENSXMAG00000010979	zc3hc1	95	43.818	Xiphophorus_maculatus