EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000029656 (Gene tree)
Gene ID: -
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 106201 bases
Position: chrMCGX01013818.1:263504-369704
Accession: 108517228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000011572	HRDC	PF00570.23	6.4e-12	1	1
ENSRBIP00000011579	HRDC	PF00570.23	8.6e-12	1	1
ENSRBIP00000011582	HRDC	PF00570.23	9.2e-12	1	1
ENSRBIP00000011584	BDHCT	PF08072.11	1.5e-20	1	1
ENSRBIP00000011579	BDHCT	PF08072.11	1.7e-20	1	1
ENSRBIP00000011582	BDHCT	PF08072.11	1.7e-20	1	1
ENSRBIP00000011572	BDHCT	PF08072.11	9e-18	1	1
ENSRBIP00000011592	DEAD	PF00270.29	4.6e-20	1	1
ENSRBIP00000011572	DEAD	PF00270.29	1.7e-19	1	1
ENSRBIP00000011582	DEAD	PF00270.29	2.6e-19	1	1
ENSRBIP00000011579	DEAD	PF00270.29	2.6e-19	1	1
ENSRBIP00000011584	DEAD	PF00270.29	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000035246	BLM-202	4191	XM_017855029	ENSRBIP00000011579	1396 (aa)	XP_017710518	A0A2K6KJZ9
ENSRBIT00000035249	BLM-203	4152	-	ENSRBIP00000011582	1383 (aa)	-	A0A2K6KJY6
ENSRBIT00000035239	BLM-201	4579	-	ENSRBIP00000011572	1042 (aa)	-	A0A2K6KJX2
ENSRBIT00000035258	BLM-205	1215	-	ENSRBIP00000011592	404 (aa)	-	A0A2K6KJZ4
ENSRBIT00000035251	BLM-204	3798	-	ENSRBIP00000011584	1265 (aa)	-	A0A2K6KK04

Gene Model

Click here to download ENSRBIG00000029656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000029656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000029656	BLM	72	40.264	ENSRBIG00000008500	RECQL5	93	41.481
ENSRBIG00000029656	BLM	71	42.361	ENSRBIG00000034966	RECQL	81	38.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000029656	BLM	100	96.257	ENSG00000197299	BLM	100	95.210	Homo_sapiens
ENSRBIG00000029656	BLM	76	76.221	ENSAPOG00000017966	blm	61	65.140	Acanthochromis_polyacanthus
ENSRBIG00000029656	BLM	92	93.531	ENSAMEG00000013843	BLM	100	78.888	Ailuropoda_melanoleuca
ENSRBIG00000029656	BLM	76	75.896	ENSACIG00000023762	blm	73	54.302	Amphilophus_citrinellus
ENSRBIG00000029656	BLM	76	75.570	ENSAOCG00000003318	blm	57	65.272	Amphiprion_ocellaris
ENSRBIG00000029656	BLM	76	75.244	ENSAPEG00000018105	blm	61	65.272	Amphiprion_percula
ENSRBIG00000029656	BLM	82	73.878	ENSATEG00000006421	blm	63	66.203	Anabas_testudineus
ENSRBIG00000029656	BLM	91	71.816	ENSAPLG00000006878	BLM	97	58.376	Anas_platyrhynchos
ENSRBIG00000029656	BLM	99	58.489	ENSACAG00000014275	BLM	81	57.841	Anolis_carolinensis
ENSRBIG00000029656	BLM	100	93.378	ENSANAG00000038415	BLM	100	89.908	Aotus_nancymaae
ENSRBIG00000029656	BLM	90	68.407	ENSACLG00000020354	blm	59	62.648	Astatotilapia_calliptera
ENSRBIG00000029656	BLM	92	68.365	ENSAMXG00000016970	blm	75	54.174	Astyanax_mexicanus
ENSRBIG00000029656	BLM	92	92.453	ENSBTAG00000020301	BLM	100	84.385	Bos_taurus
ENSRBIG00000029656	BLM	70	51.930	WBGene00001865	him-6	66	40.653	Caenorhabditis_elegans
ENSRBIG00000029656	BLM	100	92.994	ENSCJAG00000009803	BLM	100	89.485	Callithrix_jacchus
ENSRBIG00000029656	BLM	92	93.531	ENSCAFG00000012385	BLM	100	79.732	Canis_familiaris
ENSRBIG00000029656	BLM	92	93.531	ENSCAFG00020016111	BLM	94	91.108	Canis_lupus_dingo
ENSRBIG00000029656	BLM	100	84.564	ENSCHIG00000010329	BLM	100	82.392	Capra_hircus
ENSRBIG00000029656	BLM	100	89.635	ENSTSYG00000012368	BLM	100	83.791	Carlito_syrichta
ENSRBIG00000029656	BLM	92	82.527	ENSCAPG00000017976	BLM	99	85.260	Cavia_aperea
ENSRBIG00000029656	BLM	100	82.550	ENSCPOG00000001761	BLM	100	76.657	Cavia_porcellus
ENSRBIG00000029656	BLM	100	93.378	ENSCCAG00000023069	BLM	100	89.061	Cebus_capucinus
ENSRBIG00000029656	BLM	100	97.793	ENSCATG00000040609	BLM	100	97.605	Cercocebus_atys
ENSRBIG00000029656	BLM	100	83.893	ENSCLAG00000012111	BLM	100	78.561	Chinchilla_lanigera
ENSRBIG00000029656	BLM	100	98.081	ENSCSAG00000017040	BLM	100	94.382	Chlorocebus_sabaeus
ENSRBIG00000029656	BLM	86	93.798	ENSCHOG00000006255	BLM	80	93.798	Choloepus_hoffmanni
ENSRBIG00000029656	BLM	91	70.845	ENSCPBG00000025000	BLM	98	73.925	Chrysemys_picta_bellii
ENSRBIG00000029656	BLM	74	40.397	ENSCING00000021036	-	83	41.542	Ciona_intestinalis
ENSRBIG00000029656	BLM	74	40.134	ENSCSAVG00000007521	-	89	37.179	Ciona_savignyi
ENSRBIG00000029656	BLM	87	99.444	ENSCANG00000034808	BLM	100	99.444	Colobus_angolensis_palliatus
ENSRBIG00000029656	BLM	100	84.866	ENSCGRG00001024897	Blm	100	76.901	Cricetulus_griseus_chok1gshd
ENSRBIG00000029656	BLM	92	91.153	ENSCGRG00000016261	Blm	97	71.682	Cricetulus_griseus_crigri
ENSRBIG00000029656	BLM	91	66.213	ENSCSEG00000013483	blm	80	53.242	Cynoglossus_semilaevis
ENSRBIG00000029656	BLM	55	76.923	ENSCVAG00000017583	blm	73	49.254	Cyprinodon_variegatus
ENSRBIG00000029656	BLM	76	76.547	ENSDARG00000077089	blm	61	65.195	Danio_rerio
ENSRBIG00000029656	BLM	92	93.531	ENSDNOG00000010159	BLM	99	78.962	Dasypus_novemcinctus
ENSRBIG00000029656	BLM	100	80.191	ENSDORG00000011033	Blm	100	80.287	Dipodomys_ordii
ENSRBIG00000029656	BLM	72	54.110	FBgn0002906	Blm	50	40.252	Drosophila_melanogaster
ENSRBIG00000029656	BLM	78	83.193	ENSETEG00000015019	BLM	70	83.193	Echinops_telfairi
ENSRBIG00000029656	BLM	61	67.611	ENSEBUG00000015743	-	85	59.060	Eptatretus_burgeri
ENSRBIG00000029656	BLM	100	84.165	ENSEASG00005006727	BLM	100	78.984	Equus_asinus_asinus
ENSRBIG00000029656	BLM	100	86.730	ENSECAG00000011405	BLM	100	80.992	Equus_caballus
ENSRBIG00000029656	BLM	92	92.992	ENSEEUG00000001434	BLM	98	74.816	Erinaceus_europaeus
ENSRBIG00000029656	BLM	82	74.898	ENSELUG00000019098	blm	59	68.091	Esox_lucius
ENSRBIG00000029656	BLM	92	94.340	ENSFCAG00000006087	BLM	100	79.211	Felis_catus
ENSRBIG00000029656	BLM	99	58.929	ENSFALG00000010981	BLM	89	55.882	Ficedula_albicollis
ENSRBIG00000029656	BLM	93	91.983	ENSFDAG00000012658	BLM	98	86.981	Fukomys_damarensis
ENSRBIG00000029656	BLM	91	67.663	ENSFHEG00000002553	blm	83	51.971	Fundulus_heteroclitus
ENSRBIG00000029656	BLM	100	51.952	ENSGMOG00000016431	blm	90	60.936	Gadus_morhua
ENSRBIG00000029656	BLM	72	48.980	ENSGMOG00000010761	-	95	50.728	Gadus_morhua
ENSRBIG00000029656	BLM	75	50.993	ENSGMOG00000010772	-	96	50.820	Gadus_morhua
ENSRBIG00000029656	BLM	75	43.046	ENSGMOG00000013063	-	99	45.070	Gadus_morhua
ENSRBIG00000029656	BLM	74	49.342	ENSGMOG00000012988	-	99	48.718	Gadus_morhua
ENSRBIG00000029656	BLM	75	55.298	ENSGMOG00000010827	-	97	55.059	Gadus_morhua
ENSRBIG00000029656	BLM	99	59.395	ENSGALG00000008256	BLM	82	56.851	Gallus_gallus
ENSRBIG00000029656	BLM	75	75.082	ENSGAFG00000001117	blm	59	64.450	Gambusia_affinis
ENSRBIG00000029656	BLM	76	76.547	ENSGACG00000010863	blm	100	73.157	Gasterosteus_aculeatus
ENSRBIG00000029656	BLM	91	71.935	ENSGAGG00000005383	BLM	94	77.886	Gopherus_agassizii
ENSRBIG00000029656	BLM	100	96.161	ENSGGOG00000007710	BLM	100	95.792	Gorilla_gorilla
ENSRBIG00000029656	BLM	90	68.407	ENSHBUG00000015943	blm	60	62.884	Haplochromis_burtoni
ENSRBIG00000029656	BLM	100	84.084	ENSHGLG00000013231	BLM	99	79.337	Heterocephalus_glaber_female
ENSRBIG00000029656	BLM	91	69.126	ENSHCOG00000011455	blm	99	54.269	Hippocampus_comes
ENSRBIG00000029656	BLM	77	77.097	ENSIPUG00000000529	blm	68	65.605	Ictalurus_punctatus
ENSRBIG00000029656	BLM	100	85.893	ENSSTOG00000005000	BLM	100	80.380	Ictidomys_tridecemlineatus
ENSRBIG00000029656	BLM	92	92.992	ENSJJAG00000016322	Blm	94	86.551	Jaculus_jaculus
ENSRBIG00000029656	BLM	89	68.421	ENSKMAG00000016608	blm	75	53.903	Kryptolebias_marmoratus
ENSRBIG00000029656	BLM	76	75.405	ENSLBEG00000018729	blm	61	93.103	Labrus_bergylta
ENSRBIG00000029656	BLM	91	74.797	ENSLACG00000006490	BLM	99	51.009	Latimeria_chalumnae
ENSRBIG00000029656	BLM	92	67.204	ENSLOCG00000014302	blm	82	54.420	Lepisosteus_oculatus
ENSRBIG00000029656	BLM	100	97.793	ENSMFAG00000042982	BLM	100	97.030	Macaca_fascicularis
ENSRBIG00000029656	BLM	100	97.889	ENSMMUG00000019526	BLM	100	97.277	Macaca_mulatta
ENSRBIG00000029656	BLM	100	97.601	ENSMNEG00000031251	BLM	100	97.030	Macaca_nemestrina
ENSRBIG00000029656	BLM	100	97.006	ENSMLEG00000032934	BLM	100	92.731	Mandrillus_leucophaeus
ENSRBIG00000029656	BLM	90	69.146	ENSMAMG00000008726	blm	61	63.403	Mastacembelus_armatus
ENSRBIG00000029656	BLM	90	68.407	ENSMZEG00005022323	blm	64	62.515	Maylandia_zebra
ENSRBIG00000029656	BLM	57	68.403	ENSMGAG00000010473	BLM	99	68.235	Meleagris_gallopavo
ENSRBIG00000029656	BLM	100	84.770	ENSMAUG00000008953	Blm	99	76.685	Mesocricetus_auratus
ENSRBIG00000029656	BLM	100	89.272	ENSMICG00000034442	BLM	100	84.577	Microcebus_murinus
ENSRBIG00000029656	BLM	100	82.184	ENSMOCG00000016367	Blm	99	74.666	Microtus_ochrogaster
ENSRBIG00000029656	BLM	91	66.667	ENSMMOG00000006959	blm	77	52.887	Mola_mola
ENSRBIG00000029656	BLM	92	85.946	ENSMODG00000019449	BLM	99	63.828	Monodelphis_domestica
ENSRBIG00000029656	BLM	91	68.392	ENSMALG00000007323	blm	60	62.911	Monopterus_albus
ENSRBIG00000029656	BLM	100	82.934	MGP_CAROLIEiJ_G0029907	Blm	100	73.296	Mus_caroli
ENSRBIG00000029656	BLM	100	82.871	ENSMUSG00000030528	Blm	100	73.846	Mus_musculus
ENSRBIG00000029656	BLM	92	91.105	MGP_PahariEiJ_G0013129	Blm	100	73.928	Mus_pahari
ENSRBIG00000029656	BLM	100	83.046	MGP_SPRETEiJ_G0031009	Blm	100	74.123	Mus_spretus
ENSRBIG00000029656	BLM	92	92.183	ENSMPUG00000015657	BLM	99	78.027	Mustela_putorius_furo
ENSRBIG00000029656	BLM	100	83.621	ENSMLUG00000014697	BLM	100	77.809	Myotis_lucifugus
ENSRBIG00000029656	BLM	100	86.290	ENSNGAG00000001275	Blm	100	77.841	Nannospalax_galili
ENSRBIG00000029656	BLM	89	68.421	ENSNBRG00000019702	blm	64	62.619	Neolamprologus_brichardi
ENSRBIG00000029656	BLM	100	94.146	ENSNLEG00000012087	BLM	100	92.814	Nomascus_leucogenys
ENSRBIG00000029656	BLM	99	67.210	ENSMEUG00000007253	BLM	99	59.888	Notamacropus_eugenii
ENSRBIG00000029656	BLM	95	93.056	ENSOPRG00000011667	BLM	95	85.477	Ochotona_princeps
ENSRBIG00000029656	BLM	100	78.023	ENSODEG00000015373	BLM	100	78.023	Octodon_degus
ENSRBIG00000029656	BLM	72	93.426	ENSOANG00000009316	-	99	82.161	Ornithorhynchus_anatinus
ENSRBIG00000029656	BLM	92	90.027	ENSOCUG00000013969	BLM	99	73.104	Oryctolagus_cuniculus
ENSRBIG00000029656	BLM	76	76.221	ENSORLG00000008110	blm	61	65.987	Oryzias_latipes
ENSRBIG00000029656	BLM	76	76.221	ENSORLG00020004812	blm	61	65.987	Oryzias_latipes_hni
ENSRBIG00000029656	BLM	76	76.547	ENSORLG00015018640	blm	79	66.071	Oryzias_latipes_hsok
ENSRBIG00000029656	BLM	92	91.914	ENSOGAG00000005708	BLM	100	78.013	Otolemur_garnettii
ENSRBIG00000029656	BLM	92	91.914	ENSOARG00000012875	BLM	100	78.282	Ovis_aries
ENSRBIG00000029656	BLM	100	96.353	ENSPPAG00000032173	BLM	100	95.210	Pan_paniscus
ENSRBIG00000029656	BLM	100	86.015	ENSPPRG00000002471	BLM	100	79.211	Panthera_pardus
ENSRBIG00000029656	BLM	92	93.531	ENSPTIG00000016168	BLM	100	78.888	Panthera_tigris_altaica
ENSRBIG00000029656	BLM	100	95.969	ENSPTRG00000007460	BLM	100	93.413	Pan_troglodytes
ENSRBIG00000029656	BLM	100	98.204	ENSPANG00000018572	BLM	100	98.204	Papio_anubis
ENSRBIG00000029656	BLM	90	67.945	ENSPKIG00000008954	blm	65	62.338	Paramormyrops_kingsleyae
ENSRBIG00000029656	BLM	54	77.321	ENSPSIG00000009792	BLM	99	77.321	Pelodiscus_sinensis
ENSRBIG00000029656	BLM	78	73.885	ENSPMGG00000006629	blm	80	66.712	Periophthalmus_magnuspinnatus
ENSRBIG00000029656	BLM	100	83.158	ENSPEMG00000017348	Blm	100	75.457	Peromyscus_maniculatus_bairdii
ENSRBIG00000029656	BLM	89	62.881	ENSPMAG00000000445	blm	96	59.777	Petromyzon_marinus
ENSRBIG00000029656	BLM	92	84.324	ENSPCIG00000006609	BLM	99	63.147	Phascolarctos_cinereus
ENSRBIG00000029656	BLM	75	75.738	ENSPFOG00000005059	blm	74	53.753	Poecilia_formosa
ENSRBIG00000029656	BLM	75	75.738	ENSPLAG00000017344	blm	59	64.533	Poecilia_latipinna
ENSRBIG00000029656	BLM	75	75.738	ENSPMEG00000000321	blm	60	64.789	Poecilia_mexicana
ENSRBIG00000029656	BLM	75	75.082	ENSPREG00000007715	blm	59	64.405	Poecilia_reticulata
ENSRBIG00000029656	BLM	100	94.012	ENSPPYG00000006784	BLM	100	90.614	Pongo_abelii
ENSRBIG00000029656	BLM	92	88.679	ENSPCAG00000008960	BLM	71	90.909	Procavia_capensis
ENSRBIG00000029656	BLM	92	93.261	ENSPCOG00000000439	BLM	100	83.234	Propithecus_coquereli
ENSRBIG00000029656	BLM	83	94.888	ENSPVAG00000011642	BLM	88	94.888	Pteropus_vampyrus
ENSRBIG00000029656	BLM	90	42.308	ENSPNYG00000010956	blm	72	44.413	Pundamilia_nyererei
ENSRBIG00000029656	BLM	89	71.588	ENSPNAG00000011714	blm	99	47.333	Pygocentrus_nattereri
ENSRBIG00000029656	BLM	100	82.297	ENSRNOG00000011213	Blm	100	73.118	Rattus_norvegicus
ENSRBIG00000029656	BLM	100	100.000	ENSRROG00000037871	BLM	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000029656	BLM	92	96.496	ENSSBOG00000030957	BLM	100	88.647	Saimiri_boliviensis_boliviensis
ENSRBIG00000029656	BLM	91	83.924	ENSSHAG00000007988	BLM	99	63.700	Sarcophilus_harrisii
ENSRBIG00000029656	BLM	75	77.409	ENSSFOG00015015462	blm	63	64.496	Scleropages_formosus
ENSRBIG00000029656	BLM	82	72.449	ENSSMAG00000001120	blm	84	65.443	Scophthalmus_maximus
ENSRBIG00000029656	BLM	75	77.049	ENSSDUG00000010955	blm	99	45.030	Seriola_dumerili
ENSRBIG00000029656	BLM	91	67.760	ENSSLDG00000000634	blm	78	52.281	Seriola_lalandi_dorsalis
ENSRBIG00000029656	BLM	92	90.027	ENSSARG00000006398	BLM	95	76.481	Sorex_araneus
ENSRBIG00000029656	BLM	99	59.104	ENSSPUG00000000013	BLM	98	55.374	Sphenodon_punctatus
ENSRBIG00000029656	BLM	76	75.570	ENSSPAG00000013999	blm	56	65.448	Stegastes_partitus
ENSRBIG00000029656	BLM	100	85.090	ENSSSCG00000001816	BLM	99	80.335	Sus_scrofa
ENSRBIG00000029656	BLM	77	80.192	ENSTGUG00000009959	-	99	50.777	Taeniopygia_guttata
ENSRBIG00000029656	BLM	76	74.919	ENSTRUG00000019860	blm	67	64.422	Takifugu_rubripes
ENSRBIG00000029656	BLM	77	74.359	ENSTNIG00000019246	blm	66	64.676	Tetraodon_nigroviridis
ENSRBIG00000029656	BLM	77	90.043	ENSTBEG00000006706	BLM	81	83.932	Tupaia_belangeri
ENSRBIG00000029656	BLM	100	87.452	ENSTTRG00000016386	BLM	100	81.761	Tursiops_truncatus
ENSRBIG00000029656	BLM	92	94.879	ENSUMAG00000009105	BLM	97	91.655	Ursus_maritimus
ENSRBIG00000029656	BLM	92	94.070	ENSVPAG00000000085	BLM	99	78.576	Vicugna_pacos
ENSRBIG00000029656	BLM	95	93.779	ENSVVUG00000006402	BLM	100	88.736	Vulpes_vulpes
ENSRBIG00000029656	BLM	74	85.667	ENSXETG00000007847	blm	59	72.201	Xenopus_tropicalis
ENSRBIG00000029656	BLM	75	66.557	ENSXCOG00000020227	blm	73	50.233	Xiphophorus_couchianus
ENSRBIG00000029656	BLM	75	74.426	ENSXMAG00000002951	blm	75	53.209	Xiphophorus_maculatus