EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000030000 (Gene tree)
Gene ID: -
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 12687 bases
Position: chrMCGX01007132.1:608566-621252
Accession: 108541462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000012305	RRM_1	PF00076.22	7.9e-06	1	1
ENSRBIP00000012303	RRM_1	PF00076.22	1.1e-05	1	1
ENSRBIP00000012301	RRM_1	PF00076.22	1.7e-05	1	1
ENSRBIP00000012221	RRM_1	PF00076.22	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000036011	RDM1-202	756	-	ENSRBIP00000012301	251 (aa)	-	A0A2K6KM13
ENSRBIT00000036014	RDM1-203	501	-	ENSRBIP00000012303	166 (aa)	-	A0A2K6KM24
ENSRBIT00000035922	RDM1-201	1162	XM_017891012	ENSRBIP00000012221	284 (aa)	XP_017746501	A0A2K6KLS8
ENSRBIT00000036016	RDM1-204	420	-	ENSRBIP00000012305	139 (aa)	-	A0A2K6KM01

Gene Model

Click here to download ENSRBIG00000030000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000030000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000030000	RDM1	100	96.403	ENSG00000278023	RDM1	100	96.403	Homo_sapiens
ENSRBIG00000030000	RDM1	94	45.455	ENSAPOG00000021886	zgc:103564	84	35.217	Acanthochromis_polyacanthus
ENSRBIG00000030000	RDM1	94	45.455	ENSAPEG00000008929	zgc:103564	92	34.127	Amphiprion_percula
ENSRBIG00000030000	RDM1	73	67.327	ENSAPLG00000004384	RDM1	94	53.036	Anas_platyrhynchos
ENSRBIG00000030000	RDM1	95	56.818	ENSACAG00000012989	-	100	49.466	Anolis_carolinensis
ENSRBIG00000030000	RDM1	100	92.771	ENSANAG00000032752	RDM1	100	92.771	Aotus_nancymaae
ENSRBIG00000030000	RDM1	100	88.889	ENSBTAG00000000030	RDM1	100	78.596	Bos_taurus
ENSRBIG00000030000	RDM1	100	92.806	ENSCJAG00000015031	RDM1	100	92.806	Callithrix_jacchus
ENSRBIG00000030000	RDM1	96	75.000	ENSCAFG00000015160	-	100	73.438	Canis_familiaris
ENSRBIG00000030000	RDM1	98	87.407	ENSCHIG00000020607	RDM1	100	78.369	Capra_hircus
ENSRBIG00000030000	RDM1	96	81.203	ENSCPOG00000001495	-	99	69.366	Cavia_porcellus
ENSRBIG00000030000	RDM1	100	90.647	ENSCCAG00000035763	RDM1	100	91.045	Cebus_capucinus
ENSRBIG00000030000	RDM1	100	98.795	ENSCATG00000044451	RDM1	100	98.795	Cercocebus_atys
ENSRBIG00000030000	RDM1	94	92.857	ENSCSAG00000006209	RDM1	100	92.857	Chlorocebus_sabaeus
ENSRBIG00000030000	RDM1	73	72.277	ENSCPBG00000009105	RDM1	93	55.918	Chrysemys_picta_bellii
ENSRBIG00000030000	RDM1	100	97.590	ENSCANG00000041322	RDM1	100	97.590	Colobus_angolensis_palliatus
ENSRBIG00000030000	RDM1	96	81.203	ENSCGRG00001015927	Rdm1	99	73.852	Cricetulus_griseus_chok1gshd
ENSRBIG00000030000	RDM1	94	40.602	ENSCVAG00000001956	zgc:103564	96	35.581	Cyprinodon_variegatus
ENSRBIG00000030000	RDM1	89	81.818	ENSDNOG00000045224	-	94	81.818	Dasypus_novemcinctus
ENSRBIG00000030000	RDM1	73	90.196	ENSEASG00005010554	RDM1	69	80.928	Equus_asinus_asinus
ENSRBIG00000030000	RDM1	96	90.977	ENSECAG00000022182	RDM1	91	80.784	Equus_caballus
ENSRBIG00000030000	RDM1	81	82.178	ENSEEUG00000006127	RDM1	100	73.413	Erinaceus_europaeus
ENSRBIG00000030000	RDM1	100	84.892	ENSFCAG00000043429	RDM1	100	84.892	Felis_catus
ENSRBIG00000030000	RDM1	95	63.636	ENSGALG00000000243	RDM1	97	53.791	Gallus_gallus
ENSRBIG00000030000	RDM1	73	71.287	ENSGAGG00000000293	-	82	53.077	Gopherus_agassizii
ENSRBIG00000030000	RDM1	100	96.988	ENSGGOG00000010584	RDM1	100	96.988	Gorilla_gorilla
ENSRBIG00000030000	RDM1	94	43.939	ENSHCOG00000002518	-	89	37.450	Hippocampus_comes
ENSRBIG00000030000	RDM1	100	86.667	ENSSTOG00000022491	RDM1	100	82.042	Ictidomys_tridecemlineatus
ENSRBIG00000030000	RDM1	96	87.970	ENSLAFG00000029300	RDM1	100	79.021	Loxodonta_africana
ENSRBIG00000030000	RDM1	100	98.795	ENSMFAG00000032968	RDM1	100	98.795	Macaca_fascicularis
ENSRBIG00000030000	RDM1	100	98.795	ENSMMUG00000006847	RDM1	100	98.795	Macaca_mulatta
ENSRBIG00000030000	RDM1	100	98.795	ENSMNEG00000039977	RDM1	100	98.795	Macaca_nemestrina
ENSRBIG00000030000	RDM1	100	98.795	ENSMLEG00000041158	RDM1	100	98.795	Mandrillus_leucophaeus
ENSRBIG00000030000	RDM1	82	62.281	ENSMGAG00000008774	RDM1	96	54.286	Meleagris_gallopavo
ENSRBIG00000030000	RDM1	99	80.000	ENSMAUG00000018559	Rdm1	99	73.239	Mesocricetus_auratus
ENSRBIG00000030000	RDM1	100	91.111	ENSMICG00000038651	RDM1	100	89.855	Microcebus_murinus
ENSRBIG00000030000	RDM1	96	78.195	ENSMOCG00000015095	Rdm1	99	69.203	Microtus_ochrogaster
ENSRBIG00000030000	RDM1	95	71.970	ENSMODG00000011101	RDM1	100	63.768	Monodelphis_domestica
ENSRBIG00000030000	RDM1	96	84.211	MGP_CAROLIEiJ_G0017226	Rdm1	99	72.438	Mus_caroli
ENSRBIG00000030000	RDM1	96	83.459	ENSMUSG00000010362	Rdm1	99	72.857	Mus_musculus
ENSRBIG00000030000	RDM1	99	82.963	MGP_PahariEiJ_G0018356	Rdm1	99	72.183	Mus_pahari
ENSRBIG00000030000	RDM1	96	82.707	MGP_SPRETEiJ_G0018069	Rdm1	99	72.085	Mus_spretus
ENSRBIG00000030000	RDM1	100	87.407	ENSMPUG00000008363	RDM1	100	80.070	Mustela_putorius_furo
ENSRBIG00000030000	RDM1	100	96.386	ENSNLEG00000014173	RDM1	100	96.386	Nomascus_leucogenys
ENSRBIG00000030000	RDM1	95	72.727	ENSMEUG00000015826	RDM1	95	68.644	Notamacropus_eugenii
ENSRBIG00000030000	RDM1	96	85.714	ENSOCUG00000022704	RDM1	97	78.656	Oryctolagus_cuniculus
ENSRBIG00000030000	RDM1	100	84.444	ENSOGAG00000011332	RDM1	100	82.746	Otolemur_garnettii
ENSRBIG00000030000	RDM1	100	96.296	ENSPPAG00000029969	RDM1	100	96.127	Pan_paniscus
ENSRBIG00000030000	RDM1	100	97.590	ENSPTRG00000009031	RDM1	100	97.590	Pan_troglodytes
ENSRBIG00000030000	RDM1	100	98.193	ENSPANG00000022933	RDM1	100	98.193	Papio_anubis
ENSRBIG00000030000	RDM1	96	79.699	ENSPEMG00000018985	Rdm1	99	71.831	Peromyscus_maniculatus_bairdii
ENSRBIG00000030000	RDM1	100	95.070	ENSPPYG00000008198	RDM1	100	95.070	Pongo_abelii
ENSRBIG00000030000	RDM1	100	87.770	ENSPCOG00000017995	RDM1	100	87.770	Propithecus_coquereli
ENSRBIG00000030000	RDM1	96	90.226	ENSPVAG00000001116	RDM1	100	83.267	Pteropus_vampyrus
ENSRBIG00000030000	RDM1	96	82.707	ENSRNOG00000020751	Rdm1	99	72.857	Rattus_norvegicus
ENSRBIG00000030000	RDM1	100	100.000	ENSRROG00000035242	RDM1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000030000	RDM1	95	74.242	ENSSHAG00000013584	RDM1	100	66.667	Sarcophilus_harrisii
ENSRBIG00000030000	RDM1	93	62.791	ENSSPUG00000010941	RDM1	94	54.340	Sphenodon_punctatus
ENSRBIG00000030000	RDM1	94	47.794	ENSSPAG00000011690	-	95	36.981	Stegastes_partitus
ENSRBIG00000030000	RDM1	88	73.171	ENSSSCG00000017574	-	93	70.982	Sus_scrofa
ENSRBIG00000030000	RDM1	81	83.495	ENSTBEG00000010030	RDM1	99	62.302	Tupaia_belangeri
ENSRBIG00000030000	RDM1	100	87.407	ENSUAMG00000027279	RDM1	100	81.690	Ursus_americanus
ENSRBIG00000030000	RDM1	100	87.407	ENSUMAG00000015423	RDM1	98	81.690	Ursus_maritimus