EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000030229 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 1113 bases
Position: chrMCGX01001103.1:952499-953611
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000012525	RRM_5	PF13893.6	1.4e-14	1	3
ENSRBIP00000012525	RRM_5	PF13893.6	1.4e-14	2	3
ENSRBIP00000012525	RRM_5	PF13893.6	1.4e-14	3	3
ENSRBIP00000012525	RRM_1	PF00076.22	5.4e-86	1	4
ENSRBIP00000012525	RRM_1	PF00076.22	5.4e-86	2	4
ENSRBIP00000012525	RRM_1	PF00076.22	5.4e-86	3	4
ENSRBIP00000012525	RRM_1	PF00076.22	5.4e-86	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000036245	PABPC4L-201	1113	-	ENSRBIP00000012525	370 (aa)	-	A0A2K6KMM2

Gene Model

Click here to download ENSRBIG00000030229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000030229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000030229	PABPC4L	98	65.169	ENSRBIG00000029759	-	69	64.638
ENSRBIG00000030229	PABPC4L	97	32.317	ENSRBIG00000029083	TRNAU1AP	86	36.111
ENSRBIG00000030229	PABPC4L	98	59.551	ENSRBIG00000011760	PABPC5	96	59.615
ENSRBIG00000030229	PABPC4L	98	68.044	ENSRBIG00000034396	PABPC3	60	68.044
ENSRBIG00000030229	PABPC4L	98	50.760	ENSRBIG00000027660	-	65	50.760
ENSRBIG00000030229	PABPC4L	99	72.826	ENSRBIG00000039761	PABPC4	61	72.826
ENSRBIG00000030229	PABPC4L	98	62.810	ENSRBIG00000035381	PABPC1L	62	62.810
ENSRBIG00000030229	PABPC4L	80	43.421	ENSRBIG00000040498	RBM3	89	45.333
ENSRBIG00000030229	PABPC4L	63	35.526	ENSRBIG00000031290	CIRBP	80	37.333
ENSRBIG00000030229	PABPC4L	99	53.279	ENSRBIG00000000042	-	88	53.279
ENSRBIG00000030229	PABPC4L	96	63.265	ENSRBIG00000027173	-	98	63.265
ENSRBIG00000030229	PABPC4L	86	31.707	ENSRBIG00000032339	-	85	31.707
ENSRBIG00000030229	PABPC4L	98	69.146	ENSRBIG00000028738	-	70	69.146
ENSRBIG00000030229	PABPC4L	90	30.939	ENSRBIG00000012615	HNRNPA3	59	30.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000030229	PABPC4L	100	95.946	ENSG00000254535	PABPC4L	100	95.946	Homo_sapiens
ENSRBIG00000030229	PABPC4L	100	93.784	ENSANAG00000017199	PABPC4L	87	93.784	Aotus_nancymaae
ENSRBIG00000030229	PABPC4L	99	86.721	ENSBTAG00000046902	PABPC4L	99	86.721	Bos_taurus
ENSRBIG00000030229	PABPC4L	100	94.054	ENSCJAG00000045332	PABPC4L	86	94.054	Callithrix_jacchus
ENSRBIG00000030229	PABPC4L	99	72.283	ENSCAFG00020019182	-	54	72.283	Canis_lupus_dingo
ENSRBIG00000030229	PABPC4L	99	86.721	ENSCHIG00000007231	PABPC4L	99	86.721	Capra_hircus
ENSRBIG00000030229	PABPC4L	98	78.443	ENSCAPG00000000555	PABPC4L	100	78.443	Cavia_aperea
ENSRBIG00000030229	PABPC4L	99	76.694	ENSCPOG00000033167	PABPC4L	100	76.694	Cavia_porcellus
ENSRBIG00000030229	PABPC4L	100	94.054	ENSCCAG00000031681	PABPC4L	86	94.054	Cebus_capucinus
ENSRBIG00000030229	PABPC4L	100	81.622	ENSCLAG00000017628	PABPC4L	100	81.622	Chinchilla_lanigera
ENSRBIG00000030229	PABPC4L	100	98.378	ENSCANG00000037677	PABPC4L	100	98.378	Colobus_angolensis_palliatus
ENSRBIG00000030229	PABPC4L	100	80.270	ENSCGRG00001002070	Pabpc4l	100	80.270	Cricetulus_griseus_chok1gshd
ENSRBIG00000030229	PABPC4L	100	80.270	ENSCGRG00000020086	Pabpc4l	100	80.270	Cricetulus_griseus_crigri
ENSRBIG00000030229	PABPC4L	100	88.919	ENSDNOG00000031077	PABPC4L	95	88.919	Dasypus_novemcinctus
ENSRBIG00000030229	PABPC4L	99	86.992	ENSEASG00005007883	PABPC4L	99	86.992	Equus_asinus_asinus
ENSRBIG00000030229	PABPC4L	99	87.263	ENSECAG00000031416	PABPC4L	99	87.263	Equus_caballus
ENSRBIG00000030229	PABPC4L	99	86.992	ENSFCAG00000028270	PABPC4L	99	86.992	Felis_catus
ENSRBIG00000030229	PABPC4L	99	82.385	ENSFDAG00000019606	PABPC4L	99	82.385	Fukomys_damarensis
ENSRBIG00000030229	PABPC4L	100	95.946	ENSGGOG00000024991	PABPC4L	100	95.946	Gorilla_gorilla
ENSRBIG00000030229	PABPC4L	99	82.114	ENSHGLG00000020104	PABPC4L	99	82.114	Heterocephalus_glaber_female
ENSRBIG00000030229	PABPC4L	99	82.114	ENSHGLG00100020648	PABPC4L	99	82.114	Heterocephalus_glaber_male
ENSRBIG00000030229	PABPC4L	100	84.636	ENSSTOG00000019472	PABPC4L	99	84.636	Ictidomys_tridecemlineatus
ENSRBIG00000030229	PABPC4L	99	81.030	ENSJJAG00000004090	Pabpc4l	99	81.030	Jaculus_jaculus
ENSRBIG00000030229	PABPC4L	100	80.541	ENSMAUG00000016313	Pabpc4l	100	80.541	Mesocricetus_auratus
ENSRBIG00000030229	PABPC4L	100	91.622	ENSMICG00000029683	PABPC4L	100	91.622	Microcebus_murinus
ENSRBIG00000030229	PABPC4L	100	81.081	ENSMOCG00000007551	Pabpc4l	100	81.081	Microtus_ochrogaster
ENSRBIG00000030229	PABPC4L	99	80.233	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.233	Mus_caroli
ENSRBIG00000030229	PABPC4L	99	80.814	ENSMUSG00000090919	Pabpc4l	100	80.814	Mus_musculus
ENSRBIG00000030229	PABPC4L	99	81.395	MGP_PahariEiJ_G0026409	Pabpc4l	100	81.395	Mus_pahari
ENSRBIG00000030229	PABPC4L	99	80.233	MGP_SPRETEiJ_G0025903	Pabpc4l	100	80.233	Mus_spretus
ENSRBIG00000030229	PABPC4L	99	78.862	ENSMLUG00000008254	PABPC4L	99	78.862	Myotis_lucifugus
ENSRBIG00000030229	PABPC4L	100	85.135	ENSNGAG00000001502	Pabpc4l	100	85.135	Nannospalax_galili
ENSRBIG00000030229	PABPC4L	100	95.946	ENSNLEG00000019300	PABPC4L	100	95.946	Nomascus_leucogenys
ENSRBIG00000030229	PABPC4L	100	84.324	ENSOGAG00000026166	PABPC4L	100	84.324	Otolemur_garnettii
ENSRBIG00000030229	PABPC4L	99	97.523	ENSPPAG00000043745	PABPC4L	93	97.523	Pan_paniscus
ENSRBIG00000030229	PABPC4L	99	86.450	ENSPPRG00000018628	PABPC4L	99	86.450	Panthera_pardus
ENSRBIG00000030229	PABPC4L	99	86.992	ENSPTIG00000010106	PABPC4L	99	86.992	Panthera_tigris_altaica
ENSRBIG00000030229	PABPC4L	99	97.523	ENSPTRG00000045513	-	78	97.523	Pan_troglodytes
ENSRBIG00000030229	PABPC4L	100	80.000	ENSPEMG00000012565	Pabpc4l	100	80.000	Peromyscus_maniculatus_bairdii
ENSRBIG00000030229	PABPC4L	100	91.622	ENSPCOG00000025578	PABPC4L	100	91.622	Propithecus_coquereli
ENSRBIG00000030229	PABPC4L	100	78.919	ENSRNOG00000029749	Pabpc4l	100	78.919	Rattus_norvegicus
ENSRBIG00000030229	PABPC4L	100	99.730	ENSRROG00000020367	PABPC4L	100	99.730	Rhinopithecus_roxellana
ENSRBIG00000030229	PABPC4L	100	92.703	ENSSBOG00000016382	PABPC4L	100	92.703	Saimiri_boliviensis_boliviensis
ENSRBIG00000030229	PABPC4L	99	81.030	ENSSSCG00000009067	PABPC4L	99	81.030	Sus_scrofa
ENSRBIG00000030229	PABPC4L	99	86.721	ENSUAMG00000001289	PABPC4L	99	86.721	Ursus_americanus
ENSRBIG00000030229	PABPC4L	99	86.721	ENSUMAG00000014887	PABPC4L	99	86.721	Ursus_maritimus
ENSRBIG00000030229	PABPC4L	87	76.074	ENSVVUG00000011060	-	74	76.074	Vulpes_vulpes