EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000030238 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 3393 bases
Position: chrMCGX01016294.1:233820-237212
Accession: 108519466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000012538	PseudoU_synth_2	PF00849.22	3.7e-24	1	1
ENSRBIP00000012556	PseudoU_synth_2	PF00849.22	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000036279	RPUSD1-202	396	-	ENSRBIP00000012556	131 (aa)	-	A0A2K6KMQ9
ENSRBIT00000036261	RPUSD1-201	2029	XM_017858521	ENSRBIP00000012538	312 (aa)	XP_017714010	A0A2K6KMR5

Gene Model

Click here to download ENSRBIG00000030238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000030238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000030238	RPUSD1	100	97.710	ENSG00000007376	RPUSD1	100	97.710	Homo_sapiens
ENSRBIG00000030238	RPUSD1	98	56.721	ENSAPOG00000022221	rpusd1	98	55.844	Acanthochromis_polyacanthus
ENSRBIG00000030238	RPUSD1	100	81.090	ENSAMEG00000007461	RPUSD1	100	80.449	Ailuropoda_melanoleuca
ENSRBIG00000030238	RPUSD1	98	57.843	ENSACIG00000015863	rpusd1	98	58.117	Amphilophus_citrinellus
ENSRBIG00000030238	RPUSD1	98	56.066	ENSAOCG00000021975	rpusd1	95	56.410	Amphiprion_ocellaris
ENSRBIG00000030238	RPUSD1	98	55.738	ENSAPEG00000001316	rpusd1	95	56.090	Amphiprion_percula
ENSRBIG00000030238	RPUSD1	78	73.529	ENSATEG00000002984	rpusd1	98	57.980	Anabas_testudineus
ENSRBIG00000030238	RPUSD1	79	58.704	ENSAPLG00000012316	RPUSD1	99	58.704	Anas_platyrhynchos
ENSRBIG00000030238	RPUSD1	99	66.774	ENSACAG00000008953	RPUSD1	100	65.287	Anolis_carolinensis
ENSRBIG00000030238	RPUSD1	100	94.231	ENSANAG00000024709	RPUSD1	100	94.231	Aotus_nancymaae
ENSRBIG00000030238	RPUSD1	98	58.900	ENSACLG00000013692	rpusd1	98	58.576	Astatotilapia_calliptera
ENSRBIG00000030238	RPUSD1	99	58.252	ENSAMXG00000019802	rpusd1	100	57.325	Astyanax_mexicanus
ENSRBIG00000030238	RPUSD1	100	86.218	ENSBTAG00000000179	RPUSD1	100	86.218	Bos_taurus
ENSRBIG00000030238	RPUSD1	100	93.590	ENSCJAG00000012253	RPUSD1	100	93.590	Callithrix_jacchus
ENSRBIG00000030238	RPUSD1	99	81.350	ENSCAFG00000019614	RPUSD1	99	82.315	Canis_familiaris
ENSRBIG00000030238	RPUSD1	99	81.350	ENSCAFG00020008891	RPUSD1	99	82.315	Canis_lupus_dingo
ENSRBIG00000030238	RPUSD1	100	84.936	ENSCHIG00000012872	RPUSD1	100	84.936	Capra_hircus
ENSRBIG00000030238	RPUSD1	100	92.366	ENSTSYG00000036934	RPUSD1	100	92.366	Carlito_syrichta
ENSRBIG00000030238	RPUSD1	100	83.333	ENSCAPG00000014219	RPUSD1	100	82.692	Cavia_aperea
ENSRBIG00000030238	RPUSD1	100	83.333	ENSCPOG00000034604	RPUSD1	100	82.692	Cavia_porcellus
ENSRBIG00000030238	RPUSD1	100	94.551	ENSCCAG00000034385	RPUSD1	100	94.551	Cebus_capucinus
ENSRBIG00000030238	RPUSD1	100	100.000	ENSCATG00000042983	RPUSD1	100	100.000	Cercocebus_atys
ENSRBIG00000030238	RPUSD1	100	82.692	ENSCLAG00000013966	RPUSD1	100	83.013	Chinchilla_lanigera
ENSRBIG00000030238	RPUSD1	100	98.397	ENSCSAG00000012121	RPUSD1	100	98.397	Chlorocebus_sabaeus
ENSRBIG00000030238	RPUSD1	92	76.667	ENSCPBG00000021101	RPUSD1	99	65.696	Chrysemys_picta_bellii
ENSRBIG00000030238	RPUSD1	100	99.237	ENSCANG00000028576	RPUSD1	100	99.644	Colobus_angolensis_palliatus
ENSRBIG00000030238	RPUSD1	100	81.410	ENSCGRG00001014253	Rpusd1	100	80.449	Cricetulus_griseus_chok1gshd
ENSRBIG00000030238	RPUSD1	100	81.410	ENSCGRG00000017995	Rpusd1	100	80.449	Cricetulus_griseus_crigri
ENSRBIG00000030238	RPUSD1	99	55.987	ENSCSEG00000018512	rpusd1	100	55.987	Cynoglossus_semilaevis
ENSRBIG00000030238	RPUSD1	79	73.786	ENSCSEG00000007648	-	100	73.786	Cynoglossus_semilaevis
ENSRBIG00000030238	RPUSD1	98	56.311	ENSCVAG00000022746	rpusd1	98	55.519	Cyprinodon_variegatus
ENSRBIG00000030238	RPUSD1	89	72.414	ENSDARG00000060192	rpusd1	100	59.355	Danio_rerio
ENSRBIG00000030238	RPUSD1	100	84.615	ENSDNOG00000003721	RPUSD1	100	84.615	Dasypus_novemcinctus
ENSRBIG00000030238	RPUSD1	100	84.295	ENSDORG00000026656	Rpusd1	100	84.295	Dipodomys_ordii
ENSRBIG00000030238	RPUSD1	99	45.289	ENSEBUG00000008767	rpusd1	94	45.538	Eptatretus_burgeri
ENSRBIG00000030238	RPUSD1	99	85.079	ENSEASG00005018421	RPUSD1	75	86.349	Equus_asinus_asinus
ENSRBIG00000030238	RPUSD1	98	53.722	ENSELUG00000014307	rpusd1	88	51.084	Esox_lucius
ENSRBIG00000030238	RPUSD1	100	83.969	ENSFCAG00000010359	RPUSD1	99	83.969	Felis_catus
ENSRBIG00000030238	RPUSD1	89	78.448	ENSFALG00000003211	RPUSD1	100	64.516	Ficedula_albicollis
ENSRBIG00000030238	RPUSD1	100	84.295	ENSFDAG00000013398	RPUSD1	100	83.333	Fukomys_damarensis
ENSRBIG00000030238	RPUSD1	98	55.082	ENSFHEG00000004736	rpusd1	98	55.738	Fundulus_heteroclitus
ENSRBIG00000030238	RPUSD1	98	56.393	ENSGMOG00000010756	rpusd1	98	56.393	Gadus_morhua
ENSRBIG00000030238	RPUSD1	92	75.000	ENSGALG00000005315	RPUSD1	100	64.401	Gallus_gallus
ENSRBIG00000030238	RPUSD1	98	57.190	ENSGAFG00000009886	rpusd1	98	56.721	Gambusia_affinis
ENSRBIG00000030238	RPUSD1	76	74.000	ENSGACG00000014276	rpusd1	97	56.766	Gasterosteus_aculeatus
ENSRBIG00000030238	RPUSD1	79	85.437	ENSGAGG00000004181	RPUSD1	99	65.049	Gopherus_agassizii
ENSRBIG00000030238	RPUSD1	100	97.710	ENSGGOG00000013997	RPUSD1	100	97.710	Gorilla_gorilla
ENSRBIG00000030238	RPUSD1	98	58.576	ENSHBUG00000023728	rpusd1	98	58.252	Haplochromis_burtoni
ENSRBIG00000030238	RPUSD1	100	83.013	ENSHGLG00000002595	RPUSD1	100	83.013	Heterocephalus_glaber_female
ENSRBIG00000030238	RPUSD1	100	83.013	ENSHGLG00100014303	RPUSD1	100	83.013	Heterocephalus_glaber_male
ENSRBIG00000030238	RPUSD1	98	59.150	ENSHCOG00000002390	rpusd1	99	58.824	Hippocampus_comes
ENSRBIG00000030238	RPUSD1	79	77.670	ENSHCOG00000020005	-	97	77.670	Hippocampus_comes
ENSRBIG00000030238	RPUSD1	99	59.091	ENSIPUG00000001570	rpusd1	99	59.091	Ictalurus_punctatus
ENSRBIG00000030238	RPUSD1	100	87.179	ENSSTOG00000004276	RPUSD1	100	86.538	Ictidomys_tridecemlineatus
ENSRBIG00000030238	RPUSD1	100	84.936	ENSJJAG00000015696	Rpusd1	100	84.295	Jaculus_jaculus
ENSRBIG00000030238	RPUSD1	98	56.026	ENSKMAG00000017287	rpusd1	98	56.393	Kryptolebias_marmoratus
ENSRBIG00000030238	RPUSD1	98	57.377	ENSLBEG00000022502	rpusd1	98	57.377	Labrus_bergylta
ENSRBIG00000030238	RPUSD1	98	57.377	ENSLBEG00000013354	RPUSD1	98	57.377	Labrus_bergylta
ENSRBIG00000030238	RPUSD1	99	60.841	ENSLACG00000008869	RPUSD1	99	59.871	Latimeria_chalumnae
ENSRBIG00000030238	RPUSD1	79	79.612	ENSLOCG00000005682	rpusd1	99	71.759	Lepisosteus_oculatus
ENSRBIG00000030238	RPUSD1	100	81.410	ENSLAFG00000002115	RPUSD1	100	81.410	Loxodonta_africana
ENSRBIG00000030238	RPUSD1	100	100.000	ENSMFAG00000003961	RPUSD1	100	100.000	Macaca_fascicularis
ENSRBIG00000030238	RPUSD1	100	100.000	ENSMMUG00000000842	RPUSD1	100	100.000	Macaca_mulatta
ENSRBIG00000030238	RPUSD1	100	100.000	ENSMNEG00000042712	RPUSD1	100	100.000	Macaca_nemestrina
ENSRBIG00000030238	RPUSD1	100	100.000	ENSMLEG00000030591	RPUSD1	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000030238	RPUSD1	98	57.516	ENSMAMG00000004735	rpusd1	98	57.516	Mastacembelus_armatus
ENSRBIG00000030238	RPUSD1	98	58.900	ENSMZEG00005003214	rpusd1	98	58.576	Maylandia_zebra
ENSRBIG00000030238	RPUSD1	86	75.221	ENSMGAG00000005447	RPUSD1	99	63.576	Meleagris_gallopavo
ENSRBIG00000030238	RPUSD1	79	93.204	ENSMAUG00000019998	Rpusd1	100	76.692	Mesocricetus_auratus
ENSRBIG00000030238	RPUSD1	100	93.130	ENSMICG00000017561	RPUSD1	100	93.130	Microcebus_murinus
ENSRBIG00000030238	RPUSD1	99	82.958	ENSMOCG00000014082	Rpusd1	99	82.637	Microtus_ochrogaster
ENSRBIG00000030238	RPUSD1	82	72.222	ENSMMOG00000012569	rpusd1	99	56.209	Mola_mola
ENSRBIG00000030238	RPUSD1	100	66.352	ENSMODG00000016882	RPUSD1	100	66.772	Monodelphis_domestica
ENSRBIG00000030238	RPUSD1	98	58.766	ENSMALG00000017818	rpusd1	98	58.442	Monopterus_albus
ENSRBIG00000030238	RPUSD1	100	83.013	MGP_CAROLIEiJ_G0021244	Rpusd1	100	82.692	Mus_caroli
ENSRBIG00000030238	RPUSD1	100	83.333	ENSMUSG00000041199	Rpusd1	100	83.013	Mus_musculus
ENSRBIG00000030238	RPUSD1	100	81.210	MGP_PahariEiJ_G0023562	Rpusd1	99	81.994	Mus_pahari
ENSRBIG00000030238	RPUSD1	100	83.333	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.013	Mus_spretus
ENSRBIG00000030238	RPUSD1	100	80.449	ENSMPUG00000015897	RPUSD1	100	79.808	Mustela_putorius_furo
ENSRBIG00000030238	RPUSD1	100	86.859	ENSMLUG00000001089	RPUSD1	100	86.859	Myotis_lucifugus
ENSRBIG00000030238	RPUSD1	100	84.295	ENSNGAG00000003595	Rpusd1	100	83.654	Nannospalax_galili
ENSRBIG00000030238	RPUSD1	98	57.843	ENSNBRG00000006457	rpusd1	98	57.792	Neolamprologus_brichardi
ENSRBIG00000030238	RPUSD1	56	94.857	ENSNLEG00000008424	-	100	94.857	Nomascus_leucogenys
ENSRBIG00000030238	RPUSD1	100	69.231	ENSMEUG00000016049	RPUSD1	100	68.269	Notamacropus_eugenii
ENSRBIG00000030238	RPUSD1	99	76.774	ENSOPRG00000008340	RPUSD1	99	75.806	Ochotona_princeps
ENSRBIG00000030238	RPUSD1	100	81.731	ENSODEG00000016945	RPUSD1	100	81.410	Octodon_degus
ENSRBIG00000030238	RPUSD1	98	57.929	ENSONIG00000015672	rpusd1	99	57.605	Oreochromis_niloticus
ENSRBIG00000030238	RPUSD1	79	74.757	ENSOANG00000030625	-	79	73.585	Ornithorhynchus_anatinus
ENSRBIG00000030238	RPUSD1	88	69.565	ENSORLG00000013009	rpusd1	99	58.117	Oryzias_latipes
ENSRBIG00000030238	RPUSD1	99	57.792	ENSORLG00020010382	rpusd1	99	57.792	Oryzias_latipes_hni
ENSRBIG00000030238	RPUSD1	99	57.143	ENSORLG00015021354	rpusd1	99	57.143	Oryzias_latipes_hsok
ENSRBIG00000030238	RPUSD1	94	66.129	ENSOMEG00000021426	rpusd1	98	57.377	Oryzias_melastigma
ENSRBIG00000030238	RPUSD1	100	90.064	ENSOGAG00000003795	RPUSD1	100	90.064	Otolemur_garnettii
ENSRBIG00000030238	RPUSD1	100	85.897	ENSOARG00000014254	RPUSD1	100	85.897	Ovis_aries
ENSRBIG00000030238	RPUSD1	100	96.947	ENSPPAG00000034797	RPUSD1	100	96.947	Pan_paniscus
ENSRBIG00000030238	RPUSD1	100	83.206	ENSPPRG00000012389	RPUSD1	99	83.206	Panthera_pardus
ENSRBIG00000030238	RPUSD1	100	83.206	ENSPTIG00000008545	RPUSD1	99	83.206	Panthera_tigris_altaica
ENSRBIG00000030238	RPUSD1	100	96.947	ENSPTRG00000007565	RPUSD1	100	96.947	Pan_troglodytes
ENSRBIG00000030238	RPUSD1	100	99.237	ENSPANG00000024401	RPUSD1	100	99.237	Papio_anubis
ENSRBIG00000030238	RPUSD1	99	59.936	ENSPKIG00000018890	rpusd1	91	58.413	Paramormyrops_kingsleyae
ENSRBIG00000030238	RPUSD1	92	77.500	ENSPSIG00000013945	RPUSD1	100	65.696	Pelodiscus_sinensis
ENSRBIG00000030238	RPUSD1	98	56.721	ENSPMGG00000014950	rpusd1	98	56.721	Periophthalmus_magnuspinnatus
ENSRBIG00000030238	RPUSD1	100	83.333	ENSPEMG00000000497	Rpusd1	100	83.013	Peromyscus_maniculatus_bairdii
ENSRBIG00000030238	RPUSD1	79	62.500	ENSPMAG00000001563	rpusd1	81	56.000	Petromyzon_marinus
ENSRBIG00000030238	RPUSD1	100	68.590	ENSPCIG00000021216	-	94	67.949	Phascolarctos_cinereus
ENSRBIG00000030238	RPUSD1	98	58.361	ENSPFOG00000007946	rpusd1	98	58.361	Poecilia_formosa
ENSRBIG00000030238	RPUSD1	98	58.361	ENSPLAG00000011925	rpusd1	98	58.361	Poecilia_latipinna
ENSRBIG00000030238	RPUSD1	98	57.705	ENSPMEG00000002910	rpusd1	98	57.705	Poecilia_mexicana
ENSRBIG00000030238	RPUSD1	98	57.843	ENSPREG00000019851	rpusd1	98	57.516	Poecilia_reticulata
ENSRBIG00000030238	RPUSD1	100	67.628	ENSPCAG00000002258	RPUSD1	100	67.628	Procavia_capensis
ENSRBIG00000030238	RPUSD1	100	91.603	ENSPCOG00000022582	RPUSD1	100	91.603	Propithecus_coquereli
ENSRBIG00000030238	RPUSD1	100	84.936	ENSPVAG00000013104	RPUSD1	100	84.936	Pteropus_vampyrus
ENSRBIG00000030238	RPUSD1	98	58.576	ENSPNYG00000024076	rpusd1	98	58.252	Pundamilia_nyererei
ENSRBIG00000030238	RPUSD1	98	56.536	ENSPNAG00000013806	rpusd1	87	62.791	Pygocentrus_nattereri
ENSRBIG00000030238	RPUSD1	100	83.654	ENSRNOG00000023639	Rpusd1	100	83.333	Rattus_norvegicus
ENSRBIG00000030238	RPUSD1	100	100.000	ENSRROG00000036663	RPUSD1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000030238	RPUSD1	100	90.385	ENSSBOG00000033063	RPUSD1	100	91.026	Saimiri_boliviensis_boliviensis
ENSRBIG00000030238	RPUSD1	100	68.269	ENSSHAG00000013500	RPUSD1	100	68.269	Sarcophilus_harrisii
ENSRBIG00000030238	RPUSD1	99	61.812	ENSSFOG00015014394	rpusd1	99	61.165	Scleropages_formosus
ENSRBIG00000030238	RPUSD1	98	56.721	ENSSMAG00000008045	rpusd1	91	56.721	Scophthalmus_maximus
ENSRBIG00000030238	RPUSD1	82	72.072	ENSSDUG00000001829	rpusd1	95	59.344	Seriola_dumerili
ENSRBIG00000030238	RPUSD1	82	72.072	ENSSLDG00000020853	rpusd1	95	59.344	Seriola_lalandi_dorsalis
ENSRBIG00000030238	RPUSD1	54	89.820	ENSSARG00000011187	-	100	89.820	Sorex_araneus
ENSRBIG00000030238	RPUSD1	63	53.769	ENSSPUG00000005119	-	100	54.040	Sphenodon_punctatus
ENSRBIG00000030238	RPUSD1	98	57.377	ENSSPAG00000012708	rpusd1	98	57.655	Stegastes_partitus
ENSRBIG00000030238	RPUSD1	100	86.218	ENSSSCG00000008000	RPUSD1	98	89.370	Sus_scrofa
ENSRBIG00000030238	RPUSD1	92	76.667	ENSTGUG00000015375	RPUSD1	100	72.549	Taeniopygia_guttata
ENSRBIG00000030238	RPUSD1	98	56.634	ENSTRUG00000003041	rpusd1	98	57.143	Takifugu_rubripes
ENSRBIG00000030238	RPUSD1	78	75.490	ENSTNIG00000002660	rpusd1	99	53.922	Tetraodon_nigroviridis
ENSRBIG00000030238	RPUSD1	99	87.138	ENSTTRG00000010167	RPUSD1	99	87.138	Tursiops_truncatus
ENSRBIG00000030238	RPUSD1	100	80.769	ENSUAMG00000012736	RPUSD1	100	80.769	Ursus_americanus
ENSRBIG00000030238	RPUSD1	100	81.410	ENSUMAG00000021174	RPUSD1	100	80.769	Ursus_maritimus
ENSRBIG00000030238	RPUSD1	99	80.386	ENSVVUG00000012357	RPUSD1	99	80.064	Vulpes_vulpes
ENSRBIG00000030238	RPUSD1	83	77.982	ENSXETG00000007184	rpusd1	100	59.936	Xenopus_tropicalis
ENSRBIG00000030238	RPUSD1	98	56.863	ENSXCOG00000017930	rpusd1	98	55.738	Xiphophorus_couchianus
ENSRBIG00000030238	RPUSD1	98	57.516	ENSXMAG00000024084	rpusd1	98	56.721	Xiphophorus_maculatus