EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000030740 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 2811 bases
Position: chrMCGX01001114.1:351127-353937
Accession: 108520280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000013434	RRM_1	PF00076.22	3.9e-15	1	1
ENSRBIP00000013431	RRM_1	PF00076.22	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000037202	PABPN1L-201	750	XM_017859612	ENSRBIP00000013431	249 (aa)	XP_017715101	A0A2K6KQ73
ENSRBIT00000037205	PABPN1L-202	828	XM_017859605	ENSRBIP00000013434	275 (aa)	XP_017715094	A0A2K6KQ92

Gene Model

Click here to download ENSRBIG00000030740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000030740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000030740	PABPN1L	52	57.639	ENSRBIG00000040762	BCL2L2-PABPN1	52	50.000
ENSRBIG00000030740	PABPN1L	51	54.110	ENSRBIG00000042811	-	80	45.588
ENSRBIG00000030740	PABPN1L	51	56.338	ENSRBIG00000039547	-	70	46.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000030740	PABPN1L	100	90.647	ENSG00000205022	PABPN1L	100	92.086	Homo_sapiens
ENSRBIG00000030740	PABPN1L	57	56.522	ENSACIG00000021400	PABPN1L	94	55.882	Amphilophus_citrinellus
ENSRBIG00000030740	PABPN1L	59	52.096	ENSAOCG00000019844	PABPN1L	71	51.208	Amphiprion_ocellaris
ENSRBIG00000030740	PABPN1L	59	52.096	ENSAPEG00000019534	PABPN1L	71	51.208	Amphiprion_percula
ENSRBIG00000030740	PABPN1L	71	59.278	ENSACAG00000013250	PABPN1L	99	59.278	Anolis_carolinensis
ENSRBIG00000030740	PABPN1L	100	80.072	ENSANAG00000038178	PABPN1L	100	80.797	Aotus_nancymaae
ENSRBIG00000030740	PABPN1L	73	49.751	ENSACLG00000025147	PABPN1L	71	50.495	Astatotilapia_calliptera
ENSRBIG00000030740	PABPN1L	58	55.625	ENSAMXG00000010873	PABPN1L	71	52.910	Astyanax_mexicanus
ENSRBIG00000030740	PABPN1L	100	67.742	ENSBTAG00000023752	-	100	67.742	Bos_taurus
ENSRBIG00000030740	PABPN1L	51	78.723	ENSBTAG00000006727	-	86	78.723	Bos_taurus
ENSRBIG00000030740	PABPN1L	100	80.797	ENSCJAG00000045284	PABPN1L	100	81.159	Callithrix_jacchus
ENSRBIG00000030740	PABPN1L	99	64.539	ENSCHIG00000013987	PABPN1L	100	60.410	Capra_hircus
ENSRBIG00000030740	PABPN1L	95	67.658	ENSCAPG00000007240	PABPN1L	100	66.914	Cavia_aperea
ENSRBIG00000030740	PABPN1L	100	69.455	ENSCPOG00000025951	PABPN1L	100	68.727	Cavia_porcellus
ENSRBIG00000030740	PABPN1L	100	84.058	ENSCCAG00000027631	PABPN1L	100	82.609	Cebus_capucinus
ENSRBIG00000030740	PABPN1L	100	95.636	ENSCATG00000031060	PABPN1L	100	95.636	Cercocebus_atys
ENSRBIG00000030740	PABPN1L	100	72.826	ENSCLAG00000000704	PABPN1L	100	71.636	Chinchilla_lanigera
ENSRBIG00000030740	PABPN1L	100	90.034	ENSCSAG00000002881	PABPN1L	100	90.034	Chlorocebus_sabaeus
ENSRBIG00000030740	PABPN1L	71	57.653	ENSCPBG00000023441	PABPN1L	61	59.391	Chrysemys_picta_bellii
ENSRBIG00000030740	PABPN1L	100	92.029	ENSCANG00000039336	PABPN1L	100	90.580	Colobus_angolensis_palliatus
ENSRBIG00000030740	PABPN1L	100	75.000	ENSCGRG00001013211	Pabpn1l	100	73.091	Cricetulus_griseus_chok1gshd
ENSRBIG00000030740	PABPN1L	100	75.000	ENSCGRG00000015868	Pabpn1l	100	73.091	Cricetulus_griseus_crigri
ENSRBIG00000030740	PABPN1L	59	52.761	ENSCSEG00000001142	pabpn1l	75	51.471	Cynoglossus_semilaevis
ENSRBIG00000030740	PABPN1L	100	59.507	ENSDNOG00000034677	PABPN1L	100	59.364	Dasypus_novemcinctus
ENSRBIG00000030740	PABPN1L	100	72.760	ENSEASG00005000777	PABPN1L	100	70.504	Equus_asinus_asinus
ENSRBIG00000030740	PABPN1L	100	73.477	ENSECAG00000000378	PABPN1L	100	71.223	Equus_caballus
ENSRBIG00000030740	PABPN1L	100	60.364	ENSEEUG00000004747	PABPN1L	100	58.909	Erinaceus_europaeus
ENSRBIG00000030740	PABPN1L	55	60.000	ENSELUG00000018385	PABPN1L	63	56.805	Esox_lucius
ENSRBIG00000030740	PABPN1L	100	73.214	ENSFCAG00000010465	PABPN1L	100	71.326	Felis_catus
ENSRBIG00000030740	PABPN1L	73	55.941	ENSFALG00000003319	PABPN1L	80	55.721	Ficedula_albicollis
ENSRBIG00000030740	PABPN1L	100	71.377	ENSFDAG00000021067	PABPN1L	100	70.182	Fukomys_damarensis
ENSRBIG00000030740	PABPN1L	59	52.761	ENSFHEG00000018295	PABPN1L	72	51.707	Fundulus_heteroclitus
ENSRBIG00000030740	PABPN1L	55	54.000	ENSGMOG00000001475	PABPN1L	68	52.604	Gadus_morhua
ENSRBIG00000030740	PABPN1L	56	65.605	ENSGALG00000006242	PABPN1L	89	65.605	Gallus_gallus
ENSRBIG00000030740	PABPN1L	59	52.695	ENSGAFG00000012565	PABPN1L	71	50.971	Gambusia_affinis
ENSRBIG00000030740	PABPN1L	59	52.096	ENSGACG00000015428	PABPN1L	72	50.244	Gasterosteus_aculeatus
ENSRBIG00000030740	PABPN1L	65	59.444	ENSGAGG00000010613	PABPN1L	59	59.444	Gopherus_agassizii
ENSRBIG00000030740	PABPN1L	100	94.182	ENSGGOG00000012670	PABPN1L	100	94.182	Gorilla_gorilla
ENSRBIG00000030740	PABPN1L	73	49.000	ENSHBUG00000002388	PABPN1L	71	51.232	Haplochromis_burtoni
ENSRBIG00000030740	PABPN1L	96	70.455	ENSHGLG00000014207	PABPN1L	100	69.962	Heterocephalus_glaber_female
ENSRBIG00000030740	PABPN1L	96	70.455	ENSHGLG00100005230	PABPN1L	100	69.962	Heterocephalus_glaber_male
ENSRBIG00000030740	PABPN1L	59	53.704	ENSIPUG00000023583	PABPN1L	90	52.105	Ictalurus_punctatus
ENSRBIG00000030740	PABPN1L	100	68.929	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSRBIG00000030740	PABPN1L	100	70.397	ENSJJAG00000006433	Pabpn1l	100	68.478	Jaculus_jaculus
ENSRBIG00000030740	PABPN1L	59	51.497	ENSLBEG00000011647	PABPN1L	69	50.718	Labrus_bergylta
ENSRBIG00000030740	PABPN1L	71	66.327	ENSLAFG00000025902	-	78	66.327	Loxodonta_africana
ENSRBIG00000030740	PABPN1L	100	95.636	ENSMFAG00000002924	PABPN1L	100	95.636	Macaca_fascicularis
ENSRBIG00000030740	PABPN1L	100	94.909	ENSMMUG00000012438	PABPN1L	100	94.909	Macaca_mulatta
ENSRBIG00000030740	PABPN1L	100	95.273	ENSMNEG00000044808	PABPN1L	100	95.273	Macaca_nemestrina
ENSRBIG00000030740	PABPN1L	100	95.273	ENSMLEG00000032667	PABPN1L	100	95.273	Mandrillus_leucophaeus
ENSRBIG00000030740	PABPN1L	73	49.751	ENSMZEG00005002186	PABPN1L	71	50.495	Maylandia_zebra
ENSRBIG00000030740	PABPN1L	100	69.818	ENSMAUG00000014032	Pabpn1l	100	69.582	Mesocricetus_auratus
ENSRBIG00000030740	PABPN1L	100	78.623	ENSMICG00000028179	PABPN1L	100	77.455	Microcebus_murinus
ENSRBIG00000030740	PABPN1L	100	69.203	ENSMOCG00000007955	Pabpn1l	100	66.545	Microtus_ochrogaster
ENSRBIG00000030740	PABPN1L	100	55.197	ENSMODG00000003873	-	100	52.330	Monodelphis_domestica
ENSRBIG00000030740	PABPN1L	61	52.976	ENSMALG00000016926	PABPN1L	71	50.962	Monopterus_albus
ENSRBIG00000030740	PABPN1L	100	67.391	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	65.818	Mus_caroli
ENSRBIG00000030740	PABPN1L	100	67.029	ENSMUSG00000069867	Pabpn1l	100	65.455	Mus_musculus
ENSRBIG00000030740	PABPN1L	100	68.478	MGP_PahariEiJ_G0023268	Pabpn1l	100	66.545	Mus_pahari
ENSRBIG00000030740	PABPN1L	100	66.667	MGP_SPRETEiJ_G0032788	Pabpn1l	100	65.091	Mus_spretus
ENSRBIG00000030740	PABPN1L	96	54.152	ENSMLUG00000003228	PABPN1L	95	52.899	Myotis_lucifugus
ENSRBIG00000030740	PABPN1L	100	74.275	ENSNGAG00000023992	Pabpn1l	100	71.636	Nannospalax_galili
ENSRBIG00000030740	PABPN1L	54	57.333	ENSNBRG00000017078	PABPN1L	73	51.852	Neolamprologus_brichardi
ENSRBIG00000030740	PABPN1L	100	71.119	ENSOPRG00000005597	PABPN1L	100	70.290	Ochotona_princeps
ENSRBIG00000030740	PABPN1L	100	64.014	ENSODEG00000004649	PABPN1L	100	63.542	Octodon_degus
ENSRBIG00000030740	PABPN1L	100	52.899	ENSOANG00000013901	PABPN1L	100	53.405	Ornithorhynchus_anatinus
ENSRBIG00000030740	PABPN1L	73	51.485	ENSORLG00000026560	PABPN1L	71	51.485	Oryzias_latipes
ENSRBIG00000030740	PABPN1L	73	51.485	ENSORLG00020015068	PABPN1L	71	51.485	Oryzias_latipes_hni
ENSRBIG00000030740	PABPN1L	73	51.485	ENSORLG00015000397	PABPN1L	71	51.485	Oryzias_latipes_hsok
ENSRBIG00000030740	PABPN1L	77	49.296	ENSOMEG00000017896	PABPN1L	53	49.296	Oryzias_melastigma
ENSRBIG00000030740	PABPN1L	100	76.895	ENSOGAG00000000433	PABPN1L	100	77.091	Otolemur_garnettii
ENSRBIG00000030740	PABPN1L	100	65.686	ENSOARG00000013682	PABPN1L	100	65.686	Ovis_aries
ENSRBIG00000030740	PABPN1L	100	91.007	ENSPPAG00000028866	PABPN1L	100	92.086	Pan_paniscus
ENSRBIG00000030740	PABPN1L	100	72.760	ENSPPRG00000015106	PABPN1L	100	72.760	Panthera_pardus
ENSRBIG00000030740	PABPN1L	93	66.148	ENSPTIG00000015606	PABPN1L	100	66.148	Panthera_tigris_altaica
ENSRBIG00000030740	PABPN1L	100	91.007	ENSPTRG00000031120	PABPN1L	100	92.086	Pan_troglodytes
ENSRBIG00000030740	PABPN1L	100	96.000	ENSPANG00000026039	PABPN1L	100	96.000	Papio_anubis
ENSRBIG00000030740	PABPN1L	70	55.276	ENSPSIG00000003404	PABPN1L	100	56.784	Pelodiscus_sinensis
ENSRBIG00000030740	PABPN1L	100	71.739	ENSPEMG00000016624	Pabpn1l	100	69.455	Peromyscus_maniculatus_bairdii
ENSRBIG00000030740	PABPN1L	52	63.194	ENSPCIG00000007038	-	100	63.194	Phascolarctos_cinereus
ENSRBIG00000030740	PABPN1L	59	52.695	ENSPFOG00000007001	PABPN1L	89	43.348	Poecilia_formosa
ENSRBIG00000030740	PABPN1L	59	52.695	ENSPLAG00000018431	PABPN1L	71	50.971	Poecilia_latipinna
ENSRBIG00000030740	PABPN1L	59	52.695	ENSPMEG00000009108	PABPN1L	71	50.971	Poecilia_mexicana
ENSRBIG00000030740	PABPN1L	100	90.288	ENSPPYG00000007655	PABPN1L	100	91.007	Pongo_abelii
ENSRBIG00000030740	PABPN1L	100	75.636	ENSPCOG00000024077	PABPN1L	100	75.636	Propithecus_coquereli
ENSRBIG00000030740	PABPN1L	100	70.213	ENSPVAG00000002716	PABPN1L	100	68.794	Pteropus_vampyrus
ENSRBIG00000030740	PABPN1L	73	49.751	ENSPNYG00000004803	PABPN1L	71	50.495	Pundamilia_nyererei
ENSRBIG00000030740	PABPN1L	100	70.652	ENSRNOG00000029558	Pabpn1l	100	68.727	Rattus_norvegicus
ENSRBIG00000030740	PABPN1L	100	99.197	ENSRROG00000032240	-	100	99.197	Rhinopithecus_roxellana
ENSRBIG00000030740	PABPN1L	99	94.526	ENSRROG00000035483	-	99	94.526	Rhinopithecus_roxellana
ENSRBIG00000030740	PABPN1L	100	81.884	ENSSBOG00000018410	PABPN1L	100	82.246	Saimiri_boliviensis_boliviensis
ENSRBIG00000030740	PABPN1L	100	52.542	ENSSHAG00000010001	-	100	51.864	Sarcophilus_harrisii
ENSRBIG00000030740	PABPN1L	59	53.049	ENSSMAG00000021348	PABPN1L	72	50.725	Scophthalmus_maximus
ENSRBIG00000030740	PABPN1L	59	52.096	ENSSDUG00000006986	PABPN1L	71	50.239	Seriola_dumerili
ENSRBIG00000030740	PABPN1L	59	52.695	ENSSLDG00000021845	PABPN1L	71	50.718	Seriola_lalandi_dorsalis
ENSRBIG00000030740	PABPN1L	94	53.282	ENSSARG00000005178	-	99	50.965	Sorex_araneus
ENSRBIG00000030740	PABPN1L	70	58.549	ENSSPUG00000007031	PABPN1L	84	58.763	Sphenodon_punctatus
ENSRBIG00000030740	PABPN1L	73	50.485	ENSSPAG00000017978	PABPN1L	71	50.962	Stegastes_partitus
ENSRBIG00000030740	PABPN1L	100	68.214	ENSSSCG00000036367	PABPN1L	100	68.794	Sus_scrofa
ENSRBIG00000030740	PABPN1L	59	54.167	ENSTRUG00000024725	PABPN1L	81	51.675	Takifugu_rubripes
ENSRBIG00000030740	PABPN1L	100	67.626	ENSTTRG00000004691	PABPN1L	100	69.176	Tursiops_truncatus
ENSRBIG00000030740	PABPN1L	60	53.448	ENSXETG00000011258	pabpn1l	96	51.584	Xenopus_tropicalis