EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000030834 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 10790 bases
Position: chrMCGX01020304.1:54774-65563
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000013574	APOBEC_N	PF08210.11	4.6e-93	1	2
ENSRBIP00000013574	APOBEC_N	PF08210.11	4.6e-93	2	2
ENSRBIP00000013577	APOBEC_N	PF08210.11	4.1e-58	1	1
ENSRBIP00000013574	APOBEC_C	PF05240.14	1.1e-63	1	2
ENSRBIP00000013574	APOBEC_C	PF05240.14	1.1e-63	2	2
ENSRBIP00000013577	APOBEC_C	PF05240.14	7.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000037354	-	1104	-	ENSRBIP00000013574	367 (aa)	-	A0A2K6KQM7
ENSRBIT00000037359	-	585	-	ENSRBIP00000013577	194 (aa)	-	A0A2K6KQM1

Gene Model

Click here to download ENSRBIG00000030834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000030834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000030834	-	97	47.692	ENSRBIG00000035436	APOBEC3G	91	47.692
ENSRBIG00000030834	-	100	57.853	ENSRBIG00000042829	-	99	57.853
ENSRBIG00000030834	-	94	41.954	ENSRBIG00000026659	AICDA	96	40.441
ENSRBIG00000030834	-	94	34.392	ENSRBIG00000029088	APOBEC3H	97	34.694
ENSRBIG00000030834	-	100	78.889	ENSRBIG00000042297	-	100	78.889
ENSRBIG00000030834	-	96	32.178	ENSRBIG00000044756	APOBEC2	87	33.166
ENSRBIG00000030834	-	100	81.183	ENSRBIG00000030323	-	100	81.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000030834	-	100	78.261	ENSG00000243811	APOBEC3D	100	78.261	Homo_sapiens
ENSRBIG00000030834	-	100	80.435	ENSG00000128394	APOBEC3F	100	80.435	Homo_sapiens
ENSRBIG00000030834	-	100	76.344	ENSG00000244509	APOBEC3C	100	76.344	Homo_sapiens
ENSRBIG00000030834	-	100	68.557	ENSANAG00000030088	-	98	68.421	Aotus_nancymaae
ENSRBIG00000030834	-	69	69.697	ENSCJAG00000015317	-	100	69.697	Callithrix_jacchus
ENSRBIG00000030834	-	94	50.532	ENSCAFG00020002615	-	99	50.265	Canis_lupus_dingo
ENSRBIG00000030834	-	98	50.820	ENSTSYG00000030036	-	99	50.820	Carlito_syrichta
ENSRBIG00000030834	-	97	57.377	ENSTSYG00000028254	-	99	57.377	Carlito_syrichta
ENSRBIG00000030834	-	100	55.000	ENSTSYG00000034260	-	99	54.404	Carlito_syrichta
ENSRBIG00000030834	-	99	68.421	ENSCCAG00000030932	-	86	68.421	Cebus_capucinus
ENSRBIG00000030834	-	100	84.868	ENSCATG00000033502	-	94	84.868	Cercocebus_atys
ENSRBIG00000030834	-	100	72.581	ENSCATG00000043226	APOBEC3C	100	72.581	Cercocebus_atys
ENSRBIG00000030834	-	100	76.882	ENSCSAG00000006402	APOBEC3C	100	76.882	Chlorocebus_sabaeus
ENSRBIG00000030834	-	100	78.108	ENSCSAG00000006382	APOBEC3F	100	78.108	Chlorocebus_sabaeus
ENSRBIG00000030834	-	100	75.000	ENSCANG00000033269	-	99	76.630	Colobus_angolensis_palliatus
ENSRBIG00000030834	-	100	75.773	ENSCANG00000032904	-	100	75.773	Colobus_angolensis_palliatus
ENSRBIG00000030834	-	100	75.269	ENSCANG00000039177	APOBEC3C	100	75.269	Colobus_angolensis_palliatus
ENSRBIG00000030834	-	100	76.471	ENSCANG00000031957	-	100	77.322	Colobus_angolensis_palliatus
ENSRBIG00000030834	-	94	40.860	ENSDNOG00000044642	-	99	40.860	Dasypus_novemcinctus
ENSRBIG00000030834	-	100	45.918	ENSEASG00005018641	-	100	45.918	Equus_asinus_asinus
ENSRBIG00000030834	-	100	47.423	ENSECAG00000006071	-	100	47.253	Equus_caballus
ENSRBIG00000030834	-	100	79.891	ENSGGOG00000038678	APOBEC3F	100	79.891	Gorilla_gorilla
ENSRBIG00000030834	-	100	75.806	ENSGGOG00000036587	-	100	75.806	Gorilla_gorilla
ENSRBIG00000030834	-	99	42.473	ENSHGLG00000017315	-	94	42.473	Heterocephalus_glaber_female
ENSRBIG00000030834	-	99	42.473	ENSHGLG00100003105	-	92	47.283	Heterocephalus_glaber_male
ENSRBIG00000030834	-	100	73.656	ENSMFAG00000016792	APOBEC3C	100	73.656	Macaca_fascicularis
ENSRBIG00000030834	-	100	75.543	ENSMFAG00000004037	APOBEC3F	100	75.543	Macaca_fascicularis
ENSRBIG00000030834	-	100	83.770	ENSMFAG00000002331	-	100	83.770	Macaca_fascicularis
ENSRBIG00000030834	-	98	74.457	ENSMMUG00000004018	APOBEC3C	100	71.134	Macaca_mulatta
ENSRBIG00000030834	-	100	83.770	ENSMMUG00000004017	APOBEC3F	100	83.770	Macaca_mulatta
ENSRBIG00000030834	-	100	74.194	ENSMNEG00000045196	APOBEC3C	100	74.194	Macaca_nemestrina
ENSRBIG00000030834	-	100	83.770	ENSMNEG00000043316	APOBEC3D	100	83.770	Macaca_nemestrina
ENSRBIG00000030834	-	100	72.581	ENSMLEG00000036992	APOBEC3C	100	72.581	Mandrillus_leucophaeus
ENSRBIG00000030834	-	100	74.346	ENSMLEG00000029642	APOBEC3F	100	74.346	Mandrillus_leucophaeus
ENSRBIG00000030834	-	99	54.595	ENSMICG00000042615	-	89	54.595	Microcebus_murinus
ENSRBIG00000030834	-	99	47.980	ENSMLUG00000023676	-	99	47.980	Myotis_lucifugus
ENSRBIG00000030834	-	100	74.194	ENSNLEG00000028392	APOBEC3C	100	74.194	Nomascus_leucogenys
ENSRBIG00000030834	-	100	70.207	ENSNLEG00000035811	-	100	70.207	Nomascus_leucogenys
ENSRBIG00000030834	-	100	45.876	ENSOGAG00000032498	-	98	45.876	Otolemur_garnettii
ENSRBIG00000030834	-	99	46.114	ENSOGAG00000030300	-	99	46.032	Otolemur_garnettii
ENSRBIG00000030834	-	97	47.222	ENSOGAG00000033404	-	99	47.222	Otolemur_garnettii
ENSRBIG00000030834	-	100	77.957	ENSPPAG00000028218	-	100	77.957	Pan_paniscus
ENSRBIG00000030834	-	100	77.419	ENSPPAG00000014118	APOBEC3C	100	77.419	Pan_paniscus
ENSRBIG00000030834	-	99	49.462	ENSPPRG00000003726	-	98	49.462	Panthera_pardus
ENSRBIG00000030834	-	100	78.351	ENSPTRG00000041588	APOBEC3D	100	78.351	Pan_troglodytes
ENSRBIG00000030834	-	100	80.928	ENSPTRG00000014385	APOBEC3C	100	80.928	Pan_troglodytes
ENSRBIG00000030834	-	100	74.194	ENSPANG00000010775	APOBEC3F	100	74.194	Papio_anubis
ENSRBIG00000030834	-	100	73.118	ENSPPYG00000011832	APOBEC3C	100	73.118	Pongo_abelii
ENSRBIG00000030834	-	69	56.349	ENSPCOG00000018072	-	99	56.349	Propithecus_coquereli
ENSRBIG00000030834	-	71	54.264	ENSPCOG00000022067	-	99	54.264	Propithecus_coquereli
ENSRBIG00000030834	-	76	46.341	ENSPVAG00000009461	-	64	46.341	Pteropus_vampyrus
ENSRBIG00000030834	-	100	81.183	ENSRROG00000029045	APOBEC3C	100	81.183	Rhinopithecus_roxellana
ENSRBIG00000030834	-	100	98.454	ENSRROG00000028557	-	100	98.454	Rhinopithecus_roxellana
ENSRBIG00000030834	-	100	78.889	ENSRROG00000029996	-	100	78.889	Rhinopithecus_roxellana
ENSRBIG00000030834	-	100	69.892	ENSSBOG00000032780	-	100	69.892	Saimiri_boliviensis_boliviensis
ENSRBIG00000030834	-	93	48.066	ENSUAMG00000004433	-	95	48.619	Ursus_americanus
ENSRBIG00000030834	-	96	48.387	ENSUMAG00000014441	-	82	48.913	Ursus_maritimus
ENSRBIG00000030834	-	80	51.235	ENSVVUG00000014628	-	91	52.027	Vulpes_vulpes