EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000031161 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 9621 bases
Position: chrMCGX01007578.1:1046683-1056303
Accession: 108542064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000014131	APOBEC_N	PF08210.11	2.1e-27	1	1
ENSRBIP00000014131	APOBEC_C	PF05240.14	3.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000037956	APOBEC1-201	1265	XM_017891879	ENSRBIP00000014131	236 (aa)	XP_017747368	A0A2K6KS69

Gene Model

Click here to download ENSRBIG00000031161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000031161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000031161	APOBEC1	57	35.652	ENSRBIG00000030323	-	58	35.652
ENSRBIG00000031161	APOBEC1	54	31.298	ENSRBIG00000029088	APOBEC3H	65	31.298
ENSRBIG00000031161	APOBEC1	50	41.250	ENSRBIG00000042297	-	55	41.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000031161	APOBEC1	100	93.220	ENSG00000111701	APOBEC1	100	93.220	Homo_sapiens
ENSRBIG00000031161	APOBEC1	98	80.519	ENSAMEG00000007098	APOBEC1	98	80.519	Ailuropoda_melanoleuca
ENSRBIG00000031161	APOBEC1	72	40.351	ENSACAG00000028578	-	93	40.351	Anolis_carolinensis
ENSRBIG00000031161	APOBEC1	100	90.254	ENSANAG00000027743	APOBEC1	95	90.254	Aotus_nancymaae
ENSRBIG00000031161	APOBEC1	100	72.881	ENSBTAG00000014683	APOBEC1	100	72.881	Bos_taurus
ENSRBIG00000031161	APOBEC1	94	90.498	ENSCJAG00000005398	APOBEC1	100	90.498	Callithrix_jacchus
ENSRBIG00000031161	APOBEC1	100	80.085	ENSCAFG00000013901	APOBEC1	100	80.085	Canis_familiaris
ENSRBIG00000031161	APOBEC1	96	79.646	ENSCAFG00020003511	APOBEC1	95	79.646	Canis_lupus_dingo
ENSRBIG00000031161	APOBEC1	98	74.026	ENSCHIG00000011898	APOBEC1	96	74.026	Capra_hircus
ENSRBIG00000031161	APOBEC1	60	81.560	ENSTSYG00000029141	APOBEC1	100	81.560	Carlito_syrichta
ENSRBIG00000031161	APOBEC1	91	68.692	ENSCAPG00000015882	-	99	68.692	Cavia_aperea
ENSRBIG00000031161	APOBEC1	99	67.234	ENSCPOG00000033068	APOBEC1	99	67.234	Cavia_porcellus
ENSRBIG00000031161	APOBEC1	100	91.949	ENSCCAG00000022258	APOBEC1	100	91.949	Cebus_capucinus
ENSRBIG00000031161	APOBEC1	100	97.034	ENSCATG00000021613	APOBEC1	95	97.034	Cercocebus_atys
ENSRBIG00000031161	APOBEC1	97	70.306	ENSCLAG00000014645	APOBEC1	99	70.306	Chinchilla_lanigera
ENSRBIG00000031161	APOBEC1	81	95.288	ENSCSAG00000009817	APOBEC1	100	95.288	Chlorocebus_sabaeus
ENSRBIG00000031161	APOBEC1	88	39.151	ENSCPBG00000014327	-	81	39.151	Chrysemys_picta_bellii
ENSRBIG00000031161	APOBEC1	83	49.490	ENSCPBG00000014329	-	54	49.490	Chrysemys_picta_bellii
ENSRBIG00000031161	APOBEC1	77	45.455	ENSCPBG00000017398	-	82	45.455	Chrysemys_picta_bellii
ENSRBIG00000031161	APOBEC1	94	41.333	ENSCPBG00000014331	-	90	41.333	Chrysemys_picta_bellii
ENSRBIG00000031161	APOBEC1	79	47.872	ENSCPBG00000014328	-	82	47.872	Chrysemys_picta_bellii
ENSRBIG00000031161	APOBEC1	78	45.989	ENSCPBG00000014335	-	76	45.989	Chrysemys_picta_bellii
ENSRBIG00000031161	APOBEC1	97	97.826	ENSCANG00000038359	APOBEC1	100	97.826	Colobus_angolensis_palliatus
ENSRBIG00000031161	APOBEC1	97	71.616	ENSCGRG00001011130	Apobec1	100	71.616	Cricetulus_griseus_chok1gshd
ENSRBIG00000031161	APOBEC1	97	71.616	ENSCGRG00000008644	Apobec1	100	71.616	Cricetulus_griseus_crigri
ENSRBIG00000031161	APOBEC1	100	78.814	ENSDNOG00000010926	APOBEC1	100	78.814	Dasypus_novemcinctus
ENSRBIG00000031161	APOBEC1	90	65.421	ENSDORG00000023717	Apobec1	100	65.421	Dipodomys_ordii
ENSRBIG00000031161	APOBEC1	99	78.723	ENSETEG00000004867	APOBEC1	99	78.723	Echinops_telfairi
ENSRBIG00000031161	APOBEC1	98	81.818	ENSEASG00005015951	APOBEC1	97	81.818	Equus_asinus_asinus
ENSRBIG00000031161	APOBEC1	81	82.199	ENSECAG00000017163	APOBEC1	100	82.199	Equus_caballus
ENSRBIG00000031161	APOBEC1	86	53.922	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSRBIG00000031161	APOBEC1	93	65.611	ENSEEUG00000009112	-	98	65.611	Erinaceus_europaeus
ENSRBIG00000031161	APOBEC1	100	81.780	ENSFCAG00000009350	APOBEC1	100	81.780	Felis_catus
ENSRBIG00000031161	APOBEC1	60	46.154	ENSFALG00000007257	-	70	46.154	Ficedula_albicollis
ENSRBIG00000031161	APOBEC1	88	59.903	ENSFDAG00000018470	APOBEC1	99	59.903	Fukomys_damarensis
ENSRBIG00000031161	APOBEC1	68	50.617	ENSGAGG00000004947	-	83	52.632	Gopherus_agassizii
ENSRBIG00000031161	APOBEC1	77	46.995	ENSGAGG00000021744	-	71	46.995	Gopherus_agassizii
ENSRBIG00000031161	APOBEC1	72	43.750	ENSGAGG00000021745	-	64	43.750	Gopherus_agassizii
ENSRBIG00000031161	APOBEC1	92	45.662	ENSGAGG00000011837	-	88	50.833	Gopherus_agassizii
ENSRBIG00000031161	APOBEC1	83	46.500	ENSGAGG00000006624	-	70	46.500	Gopherus_agassizii
ENSRBIG00000031161	APOBEC1	99	65.532	ENSHGLG00000001495	APOBEC1	99	65.532	Heterocephalus_glaber_female
ENSRBIG00000031161	APOBEC1	99	64.681	ENSHGLG00100002187	APOBEC1	99	64.681	Heterocephalus_glaber_male
ENSRBIG00000031161	APOBEC1	91	65.116	ENSSTOG00000021971	APOBEC1	100	78.571	Ictidomys_tridecemlineatus
ENSRBIG00000031161	APOBEC1	97	74.672	ENSJJAG00000022108	Apobec1	100	74.672	Jaculus_jaculus
ENSRBIG00000031161	APOBEC1	94	77.130	ENSLAFG00000030837	APOBEC1	100	77.130	Loxodonta_africana
ENSRBIG00000031161	APOBEC1	100	97.034	ENSMFAG00000000277	APOBEC1	100	97.034	Macaca_fascicularis
ENSRBIG00000031161	APOBEC1	100	96.610	ENSMNEG00000029670	APOBEC1	100	96.610	Macaca_nemestrina
ENSRBIG00000031161	APOBEC1	100	97.034	ENSMLEG00000036301	APOBEC1	100	97.034	Mandrillus_leucophaeus
ENSRBIG00000031161	APOBEC1	92	71.296	ENSMAUG00000022167	Apobec1	97	71.296	Mesocricetus_auratus
ENSRBIG00000031161	APOBEC1	100	83.898	ENSMICG00000043645	APOBEC1	100	83.898	Microcebus_murinus
ENSRBIG00000031161	APOBEC1	100	67.797	ENSMODG00000018004	APOBEC1	100	67.797	Monodelphis_domestica
ENSRBIG00000031161	APOBEC1	97	70.175	ENSMUSG00000040613	Apobec1	99	70.175	Mus_musculus
ENSRBIG00000031161	APOBEC1	97	68.860	MGP_PahariEiJ_G0022580	-	99	68.860	Mus_pahari
ENSRBIG00000031161	APOBEC1	97	70.175	MGP_SPRETEiJ_G0029857	Apobec1	99	70.175	Mus_spretus
ENSRBIG00000031161	APOBEC1	100	77.542	ENSMPUG00000017532	APOBEC1	100	77.542	Mustela_putorius_furo
ENSRBIG00000031161	APOBEC1	97	71.616	ENSNGAG00000022607	Apobec1	100	71.616	Nannospalax_galili
ENSRBIG00000031161	APOBEC1	100	94.915	ENSNLEG00000005342	APOBEC1	100	94.915	Nomascus_leucogenys
ENSRBIG00000031161	APOBEC1	100	65.678	ENSMEUG00000013406	APOBEC1	100	65.678	Notamacropus_eugenii
ENSRBIG00000031161	APOBEC1	77	63.536	ENSOPRG00000009508	-	100	63.536	Ochotona_princeps
ENSRBIG00000031161	APOBEC1	100	76.271	ENSOCUG00000025736	APOBEC1	88	76.271	Oryctolagus_cuniculus
ENSRBIG00000031161	APOBEC1	98	80.519	ENSOGAG00000026415	APOBEC1	98	80.519	Otolemur_garnettii
ENSRBIG00000031161	APOBEC1	100	72.458	ENSOARG00000002072	APOBEC1	99	72.458	Ovis_aries
ENSRBIG00000031161	APOBEC1	98	86.580	ENSPPAG00000027657	APOBEC1	98	86.580	Pan_paniscus
ENSRBIG00000031161	APOBEC1	100	81.356	ENSPPRG00000012182	APOBEC1	100	81.356	Panthera_pardus
ENSRBIG00000031161	APOBEC1	100	81.356	ENSPTIG00000020280	APOBEC1	100	81.356	Panthera_tigris_altaica
ENSRBIG00000031161	APOBEC1	100	93.644	ENSPTRG00000004614	APOBEC1	100	93.644	Pan_troglodytes
ENSRBIG00000031161	APOBEC1	100	97.881	ENSPANG00000021027	APOBEC1	100	97.881	Papio_anubis
ENSRBIG00000031161	APOBEC1	57	47.706	ENSPSIG00000012791	-	75	47.706	Pelodiscus_sinensis
ENSRBIG00000031161	APOBEC1	99	42.373	ENSPSIG00000012568	-	99	42.373	Pelodiscus_sinensis
ENSRBIG00000031161	APOBEC1	97	68.559	ENSPEMG00000023841	Apobec1	100	68.559	Peromyscus_maniculatus_bairdii
ENSRBIG00000031161	APOBEC1	100	68.644	ENSPCIG00000023973	APOBEC1	100	68.644	Phascolarctos_cinereus
ENSRBIG00000031161	APOBEC1	100	93.220	ENSPPYG00000004228	APOBEC1	95	93.220	Pongo_abelii
ENSRBIG00000031161	APOBEC1	79	79.679	ENSPCAG00000008733	APOBEC1	100	79.679	Procavia_capensis
ENSRBIG00000031161	APOBEC1	100	81.780	ENSPCOG00000013957	APOBEC1	100	81.780	Propithecus_coquereli
ENSRBIG00000031161	APOBEC1	100	63.983	ENSPVAG00000010709	APOBEC1	100	63.983	Pteropus_vampyrus
ENSRBIG00000031161	APOBEC1	97	68.421	ENSRNOG00000015411	Apobec1	99	68.421	Rattus_norvegicus
ENSRBIG00000031161	APOBEC1	100	99.576	ENSRROG00000033576	APOBEC1	100	99.576	Rhinopithecus_roxellana
ENSRBIG00000031161	APOBEC1	73	92.486	ENSSBOG00000030587	APOBEC1	98	92.486	Saimiri_boliviensis_boliviensis
ENSRBIG00000031161	APOBEC1	96	69.604	ENSSHAG00000008925	APOBEC1	99	69.604	Sarcophilus_harrisii
ENSRBIG00000031161	APOBEC1	56	69.466	ENSSARG00000011972	-	99	69.466	Sorex_araneus
ENSRBIG00000031161	APOBEC1	73	65.698	ENSSARG00000000032	-	100	65.698	Sorex_araneus
ENSRBIG00000031161	APOBEC1	86	40.865	ENSSPUG00000009044	-	79	40.865	Sphenodon_punctatus
ENSRBIG00000031161	APOBEC1	100	77.542	ENSSSCG00000000668	APOBEC1	100	77.542	Sus_scrofa
ENSRBIG00000031161	APOBEC1	61	49.655	ENSTGUG00000013118	-	99	49.655	Taeniopygia_guttata
ENSRBIG00000031161	APOBEC1	94	76.018	ENSTBEG00000010043	APOBEC1	94	76.018	Tupaia_belangeri
ENSRBIG00000031161	APOBEC1	79	74.866	ENSTTRG00000014015	APOBEC1	100	74.866	Tursiops_truncatus
ENSRBIG00000031161	APOBEC1	98	80.087	ENSUAMG00000011636	APOBEC1	95	80.087	Ursus_americanus
ENSRBIG00000031161	APOBEC1	98	80.087	ENSUMAG00000016552	APOBEC1	95	80.087	Ursus_maritimus
ENSRBIG00000031161	APOBEC1	100	75.424	ENSVPAG00000001343	APOBEC1	100	75.424	Vicugna_pacos
ENSRBIG00000031161	APOBEC1	100	80.932	ENSVVUG00000010522	APOBEC1	100	80.932	Vulpes_vulpes