EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000032167 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 25353 bases
Position: chrMCGX01014122.1:172387-197739
Accession: 108517578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000016214	PRP21_like_P	PF12230.8	2e-51	1	1
ENSRBIP00000016221	PRP21_like_P	PF12230.8	2.1e-51	1	1
ENSRBIP00000016214	Surp	PF01805.20	1e-45	1	2
ENSRBIP00000016214	Surp	PF01805.20	1e-45	2	2
ENSRBIP00000016221	Surp	PF01805.20	1.2e-45	1	2
ENSRBIP00000016221	Surp	PF01805.20	1.2e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000040061	SF3A1-201	5826	XM_017855595	ENSRBIP00000016214	793 (aa)	XP_017711084	A0A2K6KY64
ENSRBIT00000040068	SF3A1-202	6554	-	ENSRBIP00000016221	828 (aa)	-	A0A2K6KY67

Gene Model

Click here to download ENSRBIG00000032167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000032167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000032167	SF3A1	100	99.622	ENSG00000099995	SF3A1	100	99.622	Homo_sapiens
ENSRBIG00000032167	SF3A1	100	83.145	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSRBIG00000032167	SF3A1	100	98.239	ENSAMEG00000007737	SF3A1	100	98.239	Ailuropoda_melanoleuca
ENSRBIG00000032167	SF3A1	100	84.528	ENSACIG00000020672	sf3a1	98	85.938	Amphilophus_citrinellus
ENSRBIG00000032167	SF3A1	100	82.875	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSRBIG00000032167	SF3A1	100	83.000	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSRBIG00000032167	SF3A1	97	85.956	ENSATEG00000021201	sf3a1	97	85.142	Anabas_testudineus
ENSRBIG00000032167	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.419	Anas_platyrhynchos
ENSRBIG00000032167	SF3A1	100	85.591	ENSACAG00000009415	SF3A1	100	86.823	Anolis_carolinensis
ENSRBIG00000032167	SF3A1	100	99.369	ENSANAG00000032045	SF3A1	100	99.369	Aotus_nancymaae
ENSRBIG00000032167	SF3A1	100	84.383	ENSACLG00000012622	sf3a1	98	86.180	Astatotilapia_calliptera
ENSRBIG00000032167	SF3A1	99	83.439	ENSAMXG00000005382	sf3a1	99	84.319	Astyanax_mexicanus
ENSRBIG00000032167	SF3A1	100	98.991	ENSBTAG00000003390	SF3A1	100	98.991	Bos_taurus
ENSRBIG00000032167	SF3A1	84	43.088	WBGene00004188	prp-21	94	43.321	Caenorhabditis_elegans
ENSRBIG00000032167	SF3A1	100	99.496	ENSCJAG00000010370	SF3A1	100	99.496	Callithrix_jacchus
ENSRBIG00000032167	SF3A1	100	98.739	ENSCAFG00000012559	SF3A1	100	98.739	Canis_familiaris
ENSRBIG00000032167	SF3A1	100	98.739	ENSCAFG00020000838	SF3A1	100	98.739	Canis_lupus_dingo
ENSRBIG00000032167	SF3A1	100	98.865	ENSCHIG00000018642	SF3A1	100	98.865	Capra_hircus
ENSRBIG00000032167	SF3A1	100	98.991	ENSTSYG00000004739	SF3A1	100	98.991	Carlito_syrichta
ENSRBIG00000032167	SF3A1	94	81.175	ENSCAPG00000015414	SF3A1	98	81.175	Cavia_aperea
ENSRBIG00000032167	SF3A1	100	98.865	ENSCPOG00000014589	SF3A1	100	98.865	Cavia_porcellus
ENSRBIG00000032167	SF3A1	100	99.369	ENSCCAG00000032006	SF3A1	100	99.369	Cebus_capucinus
ENSRBIG00000032167	SF3A1	100	99.748	ENSCATG00000029241	SF3A1	100	99.748	Cercocebus_atys
ENSRBIG00000032167	SF3A1	100	98.739	ENSCLAG00000006508	SF3A1	100	98.739	Chinchilla_lanigera
ENSRBIG00000032167	SF3A1	100	99.874	ENSCSAG00000009470	SF3A1	100	99.874	Chlorocebus_sabaeus
ENSRBIG00000032167	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSRBIG00000032167	SF3A1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSRBIG00000032167	SF3A1	94	52.513	ENSCING00000008526	-	66	58.238	Ciona_intestinalis
ENSRBIG00000032167	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSRBIG00000032167	SF3A1	100	99.874	ENSCANG00000033564	SF3A1	100	99.874	Colobus_angolensis_palliatus
ENSRBIG00000032167	SF3A1	100	98.361	ENSCGRG00001008933	Sf3a1	100	98.361	Cricetulus_griseus_chok1gshd
ENSRBIG00000032167	SF3A1	100	98.361	ENSCGRG00000006127	Sf3a1	100	98.361	Cricetulus_griseus_crigri
ENSRBIG00000032167	SF3A1	100	81.784	ENSCSEG00000010792	sf3a1	99	82.179	Cynoglossus_semilaevis
ENSRBIG00000032167	SF3A1	100	83.019	ENSCVAG00000004560	sf3a1	98	84.245	Cyprinodon_variegatus
ENSRBIG00000032167	SF3A1	100	82.538	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSRBIG00000032167	SF3A1	100	98.616	ENSDNOG00000010629	SF3A1	100	98.616	Dasypus_novemcinctus
ENSRBIG00000032167	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSRBIG00000032167	SF3A1	84	60.563	FBgn0266917	Sf3a1	85	60.000	Drosophila_melanogaster
ENSRBIG00000032167	SF3A1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSRBIG00000032167	SF3A1	98	65.981	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSRBIG00000032167	SF3A1	100	99.117	ENSEASG00005010254	SF3A1	100	99.117	Equus_asinus_asinus
ENSRBIG00000032167	SF3A1	100	99.117	ENSECAG00000023962	SF3A1	100	99.117	Equus_caballus
ENSRBIG00000032167	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSRBIG00000032167	SF3A1	100	82.331	ENSELUG00000022578	sf3a1	98	82.692	Esox_lucius
ENSRBIG00000032167	SF3A1	100	98.865	ENSFCAG00000011932	SF3A1	100	98.865	Felis_catus
ENSRBIG00000032167	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	100	91.940	Ficedula_albicollis
ENSRBIG00000032167	SF3A1	100	99.117	ENSFDAG00000009560	SF3A1	100	99.117	Fukomys_damarensis
ENSRBIG00000032167	SF3A1	100	84.277	ENSFHEG00000010866	sf3a1	98	85.547	Fundulus_heteroclitus
ENSRBIG00000032167	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSRBIG00000032167	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	100	92.443	Gallus_gallus
ENSRBIG00000032167	SF3A1	100	83.145	ENSGAFG00000009111	sf3a1	99	83.397	Gambusia_affinis
ENSRBIG00000032167	SF3A1	100	82.620	ENSGACG00000011893	sf3a1	97	83.639	Gasterosteus_aculeatus
ENSRBIG00000032167	SF3A1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSRBIG00000032167	SF3A1	100	99.622	ENSGGOG00000012631	SF3A1	100	99.622	Gorilla_gorilla
ENSRBIG00000032167	SF3A1	100	84.383	ENSHBUG00000015795	sf3a1	98	86.180	Haplochromis_burtoni
ENSRBIG00000032167	SF3A1	100	99.117	ENSHGLG00000007907	SF3A1	100	99.117	Heterocephalus_glaber_female
ENSRBIG00000032167	SF3A1	100	99.117	ENSHGLG00100013799	SF3A1	100	99.117	Heterocephalus_glaber_male
ENSRBIG00000032167	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.774	Hippocampus_comes
ENSRBIG00000032167	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSRBIG00000032167	SF3A1	100	99.117	ENSSTOG00000013892	SF3A1	100	99.117	Ictidomys_tridecemlineatus
ENSRBIG00000032167	SF3A1	100	98.866	ENSJJAG00000022566	Sf3a1	100	98.866	Jaculus_jaculus
ENSRBIG00000032167	SF3A1	100	82.893	ENSKMAG00000002400	sf3a1	98	84.896	Kryptolebias_marmoratus
ENSRBIG00000032167	SF3A1	100	82.642	ENSLBEG00000022974	sf3a1	99	83.226	Labrus_bergylta
ENSRBIG00000032167	SF3A1	100	87.077	ENSLACG00000003565	SF3A1	97	88.281	Latimeria_chalumnae
ENSRBIG00000032167	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSRBIG00000032167	SF3A1	100	98.991	ENSLAFG00000000448	SF3A1	100	98.991	Loxodonta_africana
ENSRBIG00000032167	SF3A1	98	62.293	ENSLAFG00000026032	-	98	61.911	Loxodonta_africana
ENSRBIG00000032167	SF3A1	100	99.748	ENSMFAG00000031979	SF3A1	100	99.748	Macaca_fascicularis
ENSRBIG00000032167	SF3A1	100	99.748	ENSMMUG00000005547	SF3A1	100	99.748	Macaca_mulatta
ENSRBIG00000032167	SF3A1	100	99.638	ENSMNEG00000037229	SF3A1	100	99.638	Macaca_nemestrina
ENSRBIG00000032167	SF3A1	100	99.874	ENSMLEG00000041908	SF3A1	100	99.874	Mandrillus_leucophaeus
ENSRBIG00000032167	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSRBIG00000032167	SF3A1	100	84.383	ENSMZEG00005009633	sf3a1	98	86.180	Maylandia_zebra
ENSRBIG00000032167	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.411	Meleagris_gallopavo
ENSRBIG00000032167	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSRBIG00000032167	SF3A1	100	99.243	ENSMICG00000010038	SF3A1	100	99.243	Microcebus_murinus
ENSRBIG00000032167	SF3A1	100	98.487	ENSMOCG00000008438	Sf3a1	100	98.487	Microtus_ochrogaster
ENSRBIG00000032167	SF3A1	100	81.761	ENSMMOG00000015588	sf3a1	98	82.368	Mola_mola
ENSRBIG00000032167	SF3A1	100	97.730	ENSMODG00000009270	SF3A1	100	97.730	Monodelphis_domestica
ENSRBIG00000032167	SF3A1	100	84.509	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSRBIG00000032167	SF3A1	100	98.235	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.235	Mus_caroli
ENSRBIG00000032167	SF3A1	100	98.235	ENSMUSG00000002129	Sf3a1	100	98.235	Mus_musculus
ENSRBIG00000032167	SF3A1	100	97.982	MGP_PahariEiJ_G0016862	Sf3a1	100	97.982	Mus_pahari
ENSRBIG00000032167	SF3A1	100	98.235	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.235	Mus_spretus
ENSRBIG00000032167	SF3A1	100	98.739	ENSMPUG00000013144	SF3A1	100	98.739	Mustela_putorius_furo
ENSRBIG00000032167	SF3A1	100	98.991	ENSMLUG00000002139	SF3A1	100	98.991	Myotis_lucifugus
ENSRBIG00000032167	SF3A1	100	98.739	ENSNGAG00000016977	Sf3a1	100	98.739	Nannospalax_galili
ENSRBIG00000032167	SF3A1	100	84.635	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSRBIG00000032167	SF3A1	100	99.874	ENSNLEG00000003686	SF3A1	100	99.874	Nomascus_leucogenys
ENSRBIG00000032167	SF3A1	96	87.895	ENSMEUG00000008741	SF3A1	100	87.895	Notamacropus_eugenii
ENSRBIG00000032167	SF3A1	100	98.235	ENSOPRG00000016636	SF3A1	100	98.235	Ochotona_princeps
ENSRBIG00000032167	SF3A1	100	99.117	ENSODEG00000002571	SF3A1	100	99.117	Octodon_degus
ENSRBIG00000032167	SF3A1	100	84.230	ENSONIG00000010848	sf3a1	98	85.547	Oreochromis_niloticus
ENSRBIG00000032167	SF3A1	100	98.487	ENSOCUG00000007633	SF3A1	100	98.487	Oryctolagus_cuniculus
ENSRBIG00000032167	SF3A1	96	81.890	ENSORLG00000013050	sf3a1	99	83.445	Oryzias_latipes
ENSRBIG00000032167	SF3A1	96	82.677	ENSORLG00020003236	sf3a1	94	83.578	Oryzias_latipes_hni
ENSRBIG00000032167	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSRBIG00000032167	SF3A1	100	82.642	ENSOMEG00000013362	sf3a1	99	83.484	Oryzias_melastigma
ENSRBIG00000032167	SF3A1	100	99.117	ENSOGAG00000012931	SF3A1	100	99.117	Otolemur_garnettii
ENSRBIG00000032167	SF3A1	100	97.100	ENSOARG00000006849	SF3A1	100	97.100	Ovis_aries
ENSRBIG00000032167	SF3A1	100	98.613	ENSPPAG00000041790	SF3A1	100	98.613	Pan_paniscus
ENSRBIG00000032167	SF3A1	100	98.865	ENSPPRG00000004391	SF3A1	100	98.865	Panthera_pardus
ENSRBIG00000032167	SF3A1	97	98.834	ENSPTIG00000000844	SF3A1	100	98.834	Panthera_tigris_altaica
ENSRBIG00000032167	SF3A1	100	99.622	ENSPTRG00000014240	SF3A1	100	99.622	Pan_troglodytes
ENSRBIG00000032167	SF3A1	100	99.874	ENSPANG00000020772	SF3A1	100	99.874	Papio_anubis
ENSRBIG00000032167	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSRBIG00000032167	SF3A1	96	84.424	ENSPMGG00000023096	sf3a1	100	84.162	Periophthalmus_magnuspinnatus
ENSRBIG00000032167	SF3A1	100	98.613	ENSPEMG00000009494	Sf3a1	100	98.613	Peromyscus_maniculatus_bairdii
ENSRBIG00000032167	SF3A1	69	78.040	ENSPMAG00000007139	-	90	77.757	Petromyzon_marinus
ENSRBIG00000032167	SF3A1	100	97.478	ENSPCIG00000022692	SF3A1	100	97.478	Phascolarctos_cinereus
ENSRBIG00000032167	SF3A1	100	75.251	ENSPFOG00000016768	sf3a1	93	78.912	Poecilia_formosa
ENSRBIG00000032167	SF3A1	100	83.522	ENSPLAG00000017268	sf3a1	97	85.098	Poecilia_latipinna
ENSRBIG00000032167	SF3A1	84	85.994	ENSPMEG00000019811	sf3a1	98	85.241	Poecilia_mexicana
ENSRBIG00000032167	SF3A1	100	83.648	ENSPREG00000010347	sf3a1	97	85.490	Poecilia_reticulata
ENSRBIG00000032167	SF3A1	100	99.874	ENSPPYG00000011707	SF3A1	100	99.874	Pongo_abelii
ENSRBIG00000032167	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSRBIG00000032167	SF3A1	100	99.243	ENSPCOG00000026630	SF3A1	100	99.243	Propithecus_coquereli
ENSRBIG00000032167	SF3A1	100	94.578	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSRBIG00000032167	SF3A1	100	84.383	ENSPNYG00000018706	sf3a1	98	86.180	Pundamilia_nyererei
ENSRBIG00000032167	SF3A1	98	84.097	ENSPNAG00000003721	sf3a1	98	85.306	Pygocentrus_nattereri
ENSRBIG00000032167	SF3A1	100	98.235	ENSRNOG00000005218	Sf3a1	100	98.235	Rattus_norvegicus
ENSRBIG00000032167	SF3A1	100	100.000	ENSRROG00000044908	SF3A1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000032167	SF3A1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSRBIG00000032167	SF3A1	99	93.418	ENSSHAG00000003666	SF3A1	98	95.084	Sarcophilus_harrisii
ENSRBIG00000032167	SF3A1	100	83.250	ENSSFOG00015004579	sf3a1	99	85.000	Scleropages_formosus
ENSRBIG00000032167	SF3A1	100	81.761	ENSSMAG00000004275	sf3a1	99	82.005	Scophthalmus_maximus
ENSRBIG00000032167	SF3A1	100	83.625	ENSSDUG00000022219	sf3a1	99	84.399	Seriola_dumerili
ENSRBIG00000032167	SF3A1	100	83.625	ENSSLDG00000012642	sf3a1	99	84.399	Seriola_lalandi_dorsalis
ENSRBIG00000032167	SF3A1	97	95.596	ENSSARG00000005960	SF3A1	100	95.596	Sorex_araneus
ENSRBIG00000032167	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSRBIG00000032167	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSRBIG00000032167	SF3A1	100	98.865	ENSSSCG00000010002	SF3A1	100	98.865	Sus_scrofa
ENSRBIG00000032167	SF3A1	95	94.195	ENSTGUG00000010547	SF3A1	99	93.645	Taeniopygia_guttata
ENSRBIG00000032167	SF3A1	100	81.635	ENSTRUG00000006118	sf3a1	97	82.484	Takifugu_rubripes
ENSRBIG00000032167	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSRBIG00000032167	SF3A1	100	91.677	ENSTBEG00000012771	SF3A1	92	100.000	Tupaia_belangeri
ENSRBIG00000032167	SF3A1	100	98.615	ENSTTRG00000001535	SF3A1	100	98.615	Tursiops_truncatus
ENSRBIG00000032167	SF3A1	99	97.967	ENSUAMG00000006750	SF3A1	99	97.967	Ursus_americanus
ENSRBIG00000032167	SF3A1	99	97.959	ENSUMAG00000016665	SF3A1	99	97.959	Ursus_maritimus
ENSRBIG00000032167	SF3A1	100	98.739	ENSVVUG00000003075	SF3A1	100	98.739	Vulpes_vulpes
ENSRBIG00000032167	SF3A1	100	85.696	ENSXETG00000016144	sf3a1	100	85.320	Xenopus_tropicalis
ENSRBIG00000032167	SF3A1	100	82.893	ENSXCOG00000015653	sf3a1	99	83.142	Xiphophorus_couchianus
ENSRBIG00000032167	SF3A1	100	83.019	ENSXMAG00000002753	sf3a1	99	83.269	Xiphophorus_maculatus