EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000032222 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 54568 bases
Position: chrMCGX01004402.1:4254569-4309136
Accession: 108534973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000016368	RRM_1	PF00076.22	2.6e-13	1	1
ENSRBIP00000016374	RRM_1	PF00076.22	2.6e-13	1	1
ENSRBIP00000016371	RRM_1	PF00076.22	3.8e-13	1	1
ENSRBIP00000016365	RRM_1	PF00076.22	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000040215	-	297	-	ENSRBIP00000016368	98 (aa)	-	A0A2K6KYL6
ENSRBIT00000040212	-	339	-	ENSRBIP00000016365	112 (aa)	-	A0A2K6KYN0
ENSRBIT00000040221	-	279	-	ENSRBIP00000016374	93 (aa)	-	A0A2K6KYM3
ENSRBIT00000040218	-	327	XM_017880654	ENSRBIP00000016371	108 (aa)	XP_017736143	A0A2K6KYK8

Gene Model

Click here to download ENSRBIG00000032222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000032222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000032222	-	70	32.308	ENSRBIG00000015923	-	52	32.308
ENSRBIG00000032222	-	89	34.286	ENSRBIG00000029449	HNRNPAB	51	34.286
ENSRBIG00000032222	-	92	98.837	ENSRBIG00000031396	-	86	98.837
ENSRBIG00000032222	-	100	92.857	ENSRBIG00000032998	-	91	92.857
ENSRBIG00000032222	-	98	93.396	ENSRBIG00000035817	-	100	93.396
ENSRBIG00000032222	-	55	35.294	ENSRBIG00000032064	-	59	34.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000032222	-	84	85.897	ENSG00000119705	SLIRP	100	86.957	Homo_sapiens
ENSRBIG00000032222	-	81	53.409	ENSAPOG00000001298	slirp	88	53.409	Acanthochromis_polyacanthus
ENSRBIG00000032222	-	96	80.899	ENSAMEG00000003975	SLIRP	88	78.750	Ailuropoda_melanoleuca
ENSRBIG00000032222	-	81	54.545	ENSACIG00000023083	slirp	87	54.545	Amphilophus_citrinellus
ENSRBIG00000032222	-	81	53.409	ENSAOCG00000006342	slirp	89	53.409	Amphiprion_ocellaris
ENSRBIG00000032222	-	81	53.409	ENSAPEG00000015719	-	90	53.409	Amphiprion_percula
ENSRBIG00000032222	-	81	53.409	ENSAPEG00000015917	slirp	89	53.409	Amphiprion_percula
ENSRBIG00000032222	-	72	61.194	ENSATEG00000013525	slirp	74	60.811	Anabas_testudineus
ENSRBIG00000032222	-	79	52.941	ENSAMXG00000018693	slirp	85	52.941	Astyanax_mexicanus
ENSRBIG00000032222	-	99	88.043	ENSCJAG00000016946	SLIRP	87	90.123	Callithrix_jacchus
ENSRBIG00000032222	-	100	75.676	ENSCAFG00020015876	-	90	75.000	Canis_lupus_dingo
ENSRBIG00000032222	-	100	80.556	ENSCCAG00000030130	SLIRP	90	81.443	Cebus_capucinus
ENSRBIG00000032222	-	100	96.939	ENSCATG00000036327	SLIRP	100	96.939	Cercocebus_atys
ENSRBIG00000032222	-	100	95.413	ENSCSAG00000011736	SLIRP	100	95.413	Chlorocebus_sabaeus
ENSRBIG00000032222	-	72	61.194	ENSCPBG00000026327	SLIRP	71	60.000	Chrysemys_picta_bellii
ENSRBIG00000032222	-	100	97.959	ENSCANG00000032892	SLIRP	100	97.959	Colobus_angolensis_palliatus
ENSRBIG00000032222	-	95	73.864	ENSCGRG00001024068	Slirp	83	71.739	Cricetulus_griseus_chok1gshd
ENSRBIG00000032222	-	95	73.864	ENSCGRG00000017440	Slirp	83	71.739	Cricetulus_griseus_crigri
ENSRBIG00000032222	-	92	48.837	ENSCSEG00000015766	slirp	75	54.054	Cynoglossus_semilaevis
ENSRBIG00000032222	-	72	67.164	ENSCVAG00000012504	slirp	68	66.667	Cyprinodon_variegatus
ENSRBIG00000032222	-	73	63.235	ENSDARG00000097753	slirp	72	63.514	Danio_rerio
ENSRBIG00000032222	-	83	66.304	ENSDNOG00000007721	SLIRP	90	63.636	Dasypus_novemcinctus
ENSRBIG00000032222	-	100	68.468	ENSDORG00000012379	Slirp	90	69.000	Dipodomys_ordii
ENSRBIG00000032222	-	90	65.979	ENSETEG00000010345	SLIRP	100	67.593	Echinops_telfairi
ENSRBIG00000032222	-	100	77.477	ENSEASG00005020193	SLIRP	90	76.000	Equus_asinus_asinus
ENSRBIG00000032222	-	92	61.628	ENSEEUG00000007257	SLIRP	91	58.696	Erinaceus_europaeus
ENSRBIG00000032222	-	70	61.538	ENSELUG00000016800	slirp	73	59.459	Esox_lucius
ENSRBIG00000032222	-	97	81.111	ENSFCAG00000036326	SLIRP	87	77.907	Felis_catus
ENSRBIG00000032222	-	72	56.716	ENSFALG00000012583	SLIRP	75	50.633	Ficedula_albicollis
ENSRBIG00000032222	-	96	67.021	ENSFDAG00000008347	SLIRP	86	64.948	Fukomys_damarensis
ENSRBIG00000032222	-	72	56.962	ENSFHEG00000004709	slirp	86	56.962	Fundulus_heteroclitus
ENSRBIG00000032222	-	79	55.844	ENSGMOG00000016948	slirp	84	53.409	Gadus_morhua
ENSRBIG00000032222	-	84	53.846	ENSGALG00000031238	SLIRP	78	57.692	Gallus_gallus
ENSRBIG00000032222	-	75	65.714	ENSGAFG00000010998	slirp	89	59.551	Gambusia_affinis
ENSRBIG00000032222	-	73	58.824	ENSGACG00000020137	slirp	83	57.746	Gasterosteus_aculeatus
ENSRBIG00000032222	-	79	61.039	ENSGAGG00000009953	SLIRP	62	55.556	Gopherus_agassizii
ENSRBIG00000032222	-	85	86.076	ENSGGOG00000011059	-	100	87.097	Gorilla_gorilla
ENSRBIG00000032222	-	100	62.162	ENSHGLG00000018491	SLIRP	90	61.000	Heterocephalus_glaber_female
ENSRBIG00000032222	-	100	62.162	ENSHGLG00100014153	SLIRP	90	61.000	Heterocephalus_glaber_male
ENSRBIG00000032222	-	80	58.621	ENSHCOG00000006795	slirp	88	58.621	Hippocampus_comes
ENSRBIG00000032222	-	80	54.023	ENSIPUG00000010214	SLIRP	87	54.023	Ictalurus_punctatus
ENSRBIG00000032222	-	90	73.000	ENSSTOG00000034316	SLIRP	90	73.000	Ictidomys_tridecemlineatus
ENSRBIG00000032222	-	79	49.351	ENSKMAG00000002038	slirp	88	46.739	Kryptolebias_marmoratus
ENSRBIG00000032222	-	81	53.409	ENSLBEG00000007564	slirp	88	53.409	Labrus_bergylta
ENSRBIG00000032222	-	81	54.444	ENSLACG00000013434	SLIRP	86	55.056	Latimeria_chalumnae
ENSRBIG00000032222	-	100	96.939	ENSMFAG00000042960	SLIRP	100	96.939	Macaca_fascicularis
ENSRBIG00000032222	-	100	97.959	ENSMMUG00000029256	SLIRP	100	97.959	Macaca_mulatta
ENSRBIG00000032222	-	100	96.939	ENSMNEG00000028921	SLIRP	100	96.939	Macaca_nemestrina
ENSRBIG00000032222	-	100	96.939	ENSMLEG00000043644	SLIRP	100	96.939	Mandrillus_leucophaeus
ENSRBIG00000032222	-	81	56.818	ENSMZEG00005004617	slirp	89	56.818	Maylandia_zebra
ENSRBIG00000032222	-	100	69.369	ENSMAUG00000003857	Slirp	90	70.000	Mesocricetus_auratus
ENSRBIG00000032222	-	100	71.795	ENSMICG00000012080	SLIRP	91	72.642	Microcebus_murinus
ENSRBIG00000032222	-	95	75.000	ENSMOCG00000016019	Slirp	96	71.296	Microtus_ochrogaster
ENSRBIG00000032222	-	81	52.273	ENSMMOG00000018268	slirp	88	52.273	Mola_mola
ENSRBIG00000032222	-	74	60.870	ENSMODG00000005207	-	100	60.563	Monodelphis_domestica
ENSRBIG00000032222	-	92	53.000	ENSMALG00000012581	slirp	89	57.471	Monopterus_albus
ENSRBIG00000032222	-	95	77.273	MGP_CAROLIEiJ_G0017995	Slirp	90	74.227	Mus_caroli
ENSRBIG00000032222	-	95	78.409	ENSMUSG00000021040	Slirp	87	75.258	Mus_musculus
ENSRBIG00000032222	-	95	78.409	MGP_SPRETEiJ_G0018840	Slirp	87	75.258	Mus_spretus
ENSRBIG00000032222	-	84	71.277	ENSMLUG00000024998	-	100	70.270	Myotis_lucifugus
ENSRBIG00000032222	-	90	68.000	ENSMLUG00000029544	-	100	68.468	Myotis_lucifugus
ENSRBIG00000032222	-	97	68.519	ENSNGAG00000016363	Slirp	86	75.281	Nannospalax_galili
ENSRBIG00000032222	-	99	84.783	ENSNLEG00000032459	-	87	83.951	Nomascus_leucogenys
ENSRBIG00000032222	-	93	77.228	ENSNLEG00000027238	-	94	77.551	Nomascus_leucogenys
ENSRBIG00000032222	-	96	79.775	ENSODEG00000012580	SLIRP	87	80.000	Octodon_degus
ENSRBIG00000032222	-	72	62.687	ENSONIG00000011692	slirp	75	62.162	Oreochromis_niloticus
ENSRBIG00000032222	-	95	59.091	ENSOANG00000022366	SLIRP	66	69.863	Ornithorhynchus_anatinus
ENSRBIG00000032222	-	81	54.545	ENSORLG00000010761	slirp	68	54.545	Oryzias_latipes
ENSRBIG00000032222	-	81	55.682	ENSORLG00020022188	slirp	88	55.682	Oryzias_latipes_hni
ENSRBIG00000032222	-	100	48.624	ENSORLG00015020171	slirp	87	54.545	Oryzias_latipes_hsok
ENSRBIG00000032222	-	81	55.682	ENSOMEG00000019321	slirp	88	55.682	Oryzias_melastigma
ENSRBIG00000032222	-	85	86.076	ENSPPAG00000040710	-	100	87.097	Pan_paniscus
ENSRBIG00000032222	-	99	79.381	ENSPPRG00000014350	SLIRP	87	79.070	Panthera_pardus
ENSRBIG00000032222	-	99	79.381	ENSPTIG00000014196	SLIRP	87	79.070	Panthera_tigris_altaica
ENSRBIG00000032222	-	85	86.076	ENSPTRG00000030691	SLIRP	100	87.097	Pan_troglodytes
ENSRBIG00000032222	-	100	97.959	ENSPANG00000026323	SLIRP	100	97.959	Papio_anubis
ENSRBIG00000032222	-	62	58.621	ENSPKIG00000008831	slirp	66	56.716	Paramormyrops_kingsleyae
ENSRBIG00000032222	-	72	68.657	ENSPMGG00000010541	slirp	79	68.116	Periophthalmus_magnuspinnatus
ENSRBIG00000032222	-	83	74.026	ENSPEMG00000013234	Slirp	96	67.890	Peromyscus_maniculatus_bairdii
ENSRBIG00000032222	-	65	53.333	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSRBIG00000032222	-	85	58.025	ENSPCIG00000026842	-	77	61.111	Phascolarctos_cinereus
ENSRBIG00000032222	-	81	56.818	ENSPFOG00000006758	slirp	88	56.818	Poecilia_formosa
ENSRBIG00000032222	-	81	57.955	ENSPLAG00000011140	slirp	88	57.955	Poecilia_latipinna
ENSRBIG00000032222	-	81	56.818	ENSPMEG00000019535	slirp	88	56.818	Poecilia_mexicana
ENSRBIG00000032222	-	81	56.818	ENSPREG00000011673	slirp	88	56.818	Poecilia_reticulata
ENSRBIG00000032222	-	88	78.947	ENSPPYG00000006030	SLIRP	97	80.189	Pongo_abelii
ENSRBIG00000032222	-	96	75.281	ENSPCOG00000015159	SLIRP	90	72.000	Propithecus_coquereli
ENSRBIG00000032222	-	80	60.920	ENSPNAG00000008633	slirp	88	60.920	Pygocentrus_nattereri
ENSRBIG00000032222	-	96	96.629	ENSRROG00000041312	-	87	97.727	Rhinopithecus_roxellana
ENSRBIG00000032222	-	100	99.107	ENSRROG00000036656	-	100	99.107	Rhinopithecus_roxellana
ENSRBIG00000032222	-	100	94.792	ENSRROG00000017133	-	100	94.792	Rhinopithecus_roxellana
ENSRBIG00000032222	-	92	97.674	ENSRROG00000035604	-	86	97.674	Rhinopithecus_roxellana
ENSRBIG00000032222	-	99	85.870	ENSSBOG00000020014	SLIRP	87	87.654	Saimiri_boliviensis_boliviensis
ENSRBIG00000032222	-	72	61.194	ENSSFOG00015011165	slirp	78	55.844	Scleropages_formosus
ENSRBIG00000032222	-	71	48.485	ENSSMAG00000012930	slirp	73	48.649	Scophthalmus_maximus
ENSRBIG00000032222	-	72	64.179	ENSSLDG00000023136	slirp	67	63.514	Seriola_lalandi_dorsalis
ENSRBIG00000032222	-	86	60.494	ENSSPUG00000009346	SLIRP	86	53.571	Sphenodon_punctatus
ENSRBIG00000032222	-	72	56.716	ENSSPAG00000013477	slirp	74	55.405	Stegastes_partitus
ENSRBIG00000032222	-	100	71.171	ENSSSCG00000028167	SLIRP	90	71.000	Sus_scrofa
ENSRBIG00000032222	-	72	58.209	ENSTGUG00000012337	SLIRP	78	51.807	Taeniopygia_guttata
ENSRBIG00000032222	-	95	47.191	ENSTRUG00000020127	slirp	74	56.000	Takifugu_rubripes
ENSRBIG00000032222	-	100	76.577	ENSUAMG00000022445	SLIRP	90	75.000	Ursus_americanus
ENSRBIG00000032222	-	100	77.477	ENSUMAG00000007166	SLIRP	90	76.000	Ursus_maritimus
ENSRBIG00000032222	-	100	72.222	ENSVPAG00000001781	SLIRP	90	72.165	Vicugna_pacos
ENSRBIG00000032222	-	83	79.221	ENSVVUG00000004436	SLIRP	90	74.000	Vulpes_vulpes
ENSRBIG00000032222	-	72	64.179	ENSXETG00000030343	SLIRP	79	64.286	Xenopus_tropicalis
ENSRBIG00000032222	-	81	57.955	ENSXCOG00000009422	slirp	88	57.955	Xiphophorus_couchianus
ENSRBIG00000032222	-	81	59.091	ENSXMAG00000015655	slirp	88	59.091	Xiphophorus_maculatus