EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000032929 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 37637 bases
Position: chrMCGX01007012.1:2514113-2551749
Accession: 108541152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000017840	MRP-S27	PF10037.9	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000041697	PTCD2-201	1110	XM_017890585	ENSRBIP00000017840	369 (aa)	XP_017746074	A0A2K6L2V5
ENSRBIT00000041703	PTCD2-204	651	-	ENSRBIP00000017846	216 (aa)	-	A0A2K6L2V7
ENSRBIT00000041698	PTCD2-202	840	-	ENSRBIP00000017841	279 (aa)	-	A0A2K6L2V0
ENSRBIT00000041702	PTCD2-203	1655	-	ENSRBIP00000017845	198 (aa)	-	A0A2K6L2V8

Gene Model

Click here to download ENSRBIG00000032929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000032929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000032929	PTCD2	100	85.052	ENSG00000049883	PTCD2	100	90.640	Homo_sapiens
ENSRBIG00000032929	PTCD2	96	42.133	ENSAPOG00000020682	ptcd2	97	42.133	Acanthochromis_polyacanthus
ENSRBIG00000032929	PTCD2	100	72.165	ENSAMEG00000007194	PTCD2	100	72.165	Ailuropoda_melanoleuca
ENSRBIG00000032929	PTCD2	88	38.109	ENSACIG00000002053	ptcd2	100	38.109	Amphilophus_citrinellus
ENSRBIG00000032929	PTCD2	96	41.333	ENSAOCG00000006616	ptcd2	96	41.333	Amphiprion_ocellaris
ENSRBIG00000032929	PTCD2	96	41.333	ENSAPEG00000022926	ptcd2	96	41.333	Amphiprion_percula
ENSRBIG00000032929	PTCD2	96	54.570	ENSACAG00000009747	PTCD2	93	54.570	Anolis_carolinensis
ENSRBIG00000032929	PTCD2	100	82.732	ENSANAG00000029353	PTCD2	100	82.732	Aotus_nancymaae
ENSRBIG00000032929	PTCD2	96	40.267	ENSACLG00000027742	ptcd2	96	40.267	Astatotilapia_calliptera
ENSRBIG00000032929	PTCD2	91	40.563	ENSAMXG00000029404	ptcd2	93	40.563	Astyanax_mexicanus
ENSRBIG00000032929	PTCD2	99	75.521	ENSBTAG00000014675	PTCD2	100	75.521	Bos_taurus
ENSRBIG00000032929	PTCD2	100	80.928	ENSCJAG00000016364	PTCD2	100	80.928	Callithrix_jacchus
ENSRBIG00000032929	PTCD2	99	72.468	ENSCAFG00000007982	PTCD2	90	72.468	Canis_familiaris
ENSRBIG00000032929	PTCD2	89	73.410	ENSCAFG00020019147	PTCD2	97	73.410	Canis_lupus_dingo
ENSRBIG00000032929	PTCD2	99	75.521	ENSCHIG00000017118	PTCD2	100	75.521	Capra_hircus
ENSRBIG00000032929	PTCD2	99	71.279	ENSCPOG00000040168	PTCD2	100	71.279	Cavia_porcellus
ENSRBIG00000032929	PTCD2	80	74.760	ENSCCAG00000021996	-	98	72.727	Cebus_capucinus
ENSRBIG00000032929	PTCD2	100	80.670	ENSCCAG00000029389	-	100	80.670	Cebus_capucinus
ENSRBIG00000032929	PTCD2	99	89.034	ENSCATG00000019069	PTCD2	100	89.034	Cercocebus_atys
ENSRBIG00000032929	PTCD2	99	69.191	ENSCLAG00000000072	PTCD2	100	69.191	Chinchilla_lanigera
ENSRBIG00000032929	PTCD2	99	89.817	ENSCSAG00000015623	PTCD2	100	89.817	Chlorocebus_sabaeus
ENSRBIG00000032929	PTCD2	88	53.736	ENSCHOG00000010634	PTCD2	100	53.736	Choloepus_hoffmanni
ENSRBIG00000032929	PTCD2	99	50.904	ENSCPBG00000000216	PTCD2	99	50.904	Chrysemys_picta_bellii
ENSRBIG00000032929	PTCD2	100	91.495	ENSCANG00000035636	PTCD2	100	91.495	Colobus_angolensis_palliatus
ENSRBIG00000032929	PTCD2	99	68.653	ENSCGRG00001015289	Ptcd2	84	68.653	Cricetulus_griseus_chok1gshd
ENSRBIG00000032929	PTCD2	99	68.653	ENSCGRG00000006193	Ptcd2	84	68.653	Cricetulus_griseus_crigri
ENSRBIG00000032929	PTCD2	89	41.954	ENSCVAG00000001285	ptcd2	89	41.954	Cyprinodon_variegatus
ENSRBIG00000032929	PTCD2	98	40.052	ENSDARG00000035391	ptcd2	99	40.052	Danio_rerio
ENSRBIG00000032929	PTCD2	99	71.802	ENSDNOG00000008719	PTCD2	100	71.802	Dasypus_novemcinctus
ENSRBIG00000032929	PTCD2	99	72.351	ENSDORG00000004921	Ptcd2	100	72.351	Dipodomys_ordii
ENSRBIG00000032929	PTCD2	99	63.144	ENSETEG00000016542	PTCD2	99	63.144	Echinops_telfairi
ENSRBIG00000032929	PTCD2	99	74.935	ENSEASG00005018038	PTCD2	100	74.935	Equus_asinus_asinus
ENSRBIG00000032929	PTCD2	100	74.550	ENSECAG00000007022	PTCD2	100	74.550	Equus_caballus
ENSRBIG00000032929	PTCD2	99	67.188	ENSEEUG00000014031	PTCD2	99	67.188	Erinaceus_europaeus
ENSRBIG00000032929	PTCD2	90	47.293	ENSELUG00000003584	ptcd2	91	47.293	Esox_lucius
ENSRBIG00000032929	PTCD2	99	68.475	ENSFCAG00000045432	PTCD2	83	68.475	Felis_catus
ENSRBIG00000032929	PTCD2	83	48.624	ENSFALG00000010299	PTCD2	99	48.624	Ficedula_albicollis
ENSRBIG00000032929	PTCD2	99	72.846	ENSFDAG00000018461	PTCD2	100	72.846	Fukomys_damarensis
ENSRBIG00000032929	PTCD2	89	46.439	ENSGMOG00000003637	ptcd2	91	46.439	Gadus_morhua
ENSRBIG00000032929	PTCD2	90	46.571	ENSGALG00000038260	PTCD2	99	45.093	Gallus_gallus
ENSRBIG00000032929	PTCD2	99	53.747	ENSGAGG00000021952	PTCD2	99	53.747	Gopherus_agassizii
ENSRBIG00000032929	PTCD2	100	84.794	ENSGGOG00000010695	PTCD2	100	84.794	Gorilla_gorilla
ENSRBIG00000032929	PTCD2	96	40.533	ENSHBUG00000009191	ptcd2	96	40.533	Haplochromis_burtoni
ENSRBIG00000032929	PTCD2	99	70.757	ENSHGLG00000001234	PTCD2	100	70.757	Heterocephalus_glaber_female
ENSRBIG00000032929	PTCD2	99	70.757	ENSHGLG00100015419	PTCD2	100	70.757	Heterocephalus_glaber_male
ENSRBIG00000032929	PTCD2	96	42.287	ENSHCOG00000001703	ptcd2	95	42.287	Hippocampus_comes
ENSRBIG00000032929	PTCD2	83	41.667	ENSIPUG00000006080	ptcd2	90	41.618	Ictalurus_punctatus
ENSRBIG00000032929	PTCD2	98	73.822	ENSSTOG00000006596	PTCD2	99	73.822	Ictidomys_tridecemlineatus
ENSRBIG00000032929	PTCD2	99	72.324	ENSJJAG00000024388	Ptcd2	100	72.324	Jaculus_jaculus
ENSRBIG00000032929	PTCD2	96	39.305	ENSKMAG00000009329	ptcd2	97	39.305	Kryptolebias_marmoratus
ENSRBIG00000032929	PTCD2	96	42.513	ENSLBEG00000024871	ptcd2	95	42.513	Labrus_bergylta
ENSRBIG00000032929	PTCD2	94	50.546	ENSLOCG00000011122	ptcd2	95	50.546	Lepisosteus_oculatus
ENSRBIG00000032929	PTCD2	79	70.096	ENSLAFG00000004115	PTCD2	100	70.096	Loxodonta_africana
ENSRBIG00000032929	PTCD2	100	90.206	ENSMFAG00000031516	PTCD2	100	90.206	Macaca_fascicularis
ENSRBIG00000032929	PTCD2	99	89.817	ENSMNEG00000007537	PTCD2	100	89.817	Macaca_nemestrina
ENSRBIG00000032929	PTCD2	100	89.433	ENSMLEG00000031093	PTCD2	100	89.433	Mandrillus_leucophaeus
ENSRBIG00000032929	PTCD2	89	43.678	ENSMAMG00000018529	ptcd2	91	43.678	Mastacembelus_armatus
ENSRBIG00000032929	PTCD2	96	40.267	ENSMZEG00005003625	ptcd2	96	40.267	Maylandia_zebra
ENSRBIG00000032929	PTCD2	89	47.126	ENSMGAG00000005033	PTCD2	100	47.126	Meleagris_gallopavo
ENSRBIG00000032929	PTCD2	99	53.525	ENSMAUG00000020253	Ptcd2	100	53.525	Mesocricetus_auratus
ENSRBIG00000032929	PTCD2	99	74.935	ENSMICG00000004535	PTCD2	99	74.935	Microcebus_murinus
ENSRBIG00000032929	PTCD2	99	68.668	ENSMOCG00000019985	Ptcd2	100	68.668	Microtus_ochrogaster
ENSRBIG00000032929	PTCD2	99	53.646	ENSMODG00000001695	PTCD2	100	53.646	Monodelphis_domestica
ENSRBIG00000032929	PTCD2	89	45.402	ENSMALG00000022372	ptcd2	91	45.402	Monopterus_albus
ENSRBIG00000032929	PTCD2	99	68.668	MGP_CAROLIEiJ_G0018829	Ptcd2	100	68.668	Mus_caroli
ENSRBIG00000032929	PTCD2	99	67.885	ENSMUSG00000021650	Ptcd2	100	67.885	Mus_musculus
ENSRBIG00000032929	PTCD2	99	70.496	MGP_PahariEiJ_G0015904	Ptcd2	100	70.496	Mus_pahari
ENSRBIG00000032929	PTCD2	99	68.407	MGP_SPRETEiJ_G0019711	Ptcd2	100	68.407	Mus_spretus
ENSRBIG00000032929	PTCD2	99	74.935	ENSMPUG00000014401	PTCD2	100	74.935	Mustela_putorius_furo
ENSRBIG00000032929	PTCD2	99	73.316	ENSMLUG00000007374	PTCD2	99	73.316	Myotis_lucifugus
ENSRBIG00000032929	PTCD2	99	69.191	ENSNGAG00000005027	Ptcd2	100	69.191	Nannospalax_galili
ENSRBIG00000032929	PTCD2	96	40.533	ENSNBRG00000008174	ptcd2	97	40.533	Neolamprologus_brichardi
ENSRBIG00000032929	PTCD2	84	40.000	ENSNBRG00000000092	-	100	40.000	Neolamprologus_brichardi
ENSRBIG00000032929	PTCD2	100	84.536	ENSNLEG00000004516	PTCD2	100	84.536	Nomascus_leucogenys
ENSRBIG00000032929	PTCD2	99	41.860	ENSMEUG00000014012	-	99	41.860	Notamacropus_eugenii
ENSRBIG00000032929	PTCD2	99	68.992	ENSOPRG00000007290	PTCD2	99	68.992	Ochotona_princeps
ENSRBIG00000032929	PTCD2	99	73.629	ENSODEG00000016417	PTCD2	100	73.629	Octodon_degus
ENSRBIG00000032929	PTCD2	80	41.456	ENSONIG00000011269	ptcd2	92	41.456	Oreochromis_niloticus
ENSRBIG00000032929	PTCD2	94	74.795	ENSOCUG00000007970	PTCD2	100	74.413	Oryctolagus_cuniculus
ENSRBIG00000032929	PTCD2	93	42.857	ENSORLG00000003851	ptcd2	92	42.857	Oryzias_latipes
ENSRBIG00000032929	PTCD2	93	42.033	ENSORLG00020009823	ptcd2	94	42.033	Oryzias_latipes_hni
ENSRBIG00000032929	PTCD2	89	42.939	ENSORLG00015016777	ptcd2	99	43.353	Oryzias_latipes_hsok
ENSRBIG00000032929	PTCD2	93	41.713	ENSOMEG00000012396	ptcd2	87	41.713	Oryzias_melastigma
ENSRBIG00000032929	PTCD2	99	69.767	ENSOGAG00000008390	PTCD2	99	69.767	Otolemur_garnettii
ENSRBIG00000032929	PTCD2	99	74.935	ENSOARG00000005087	PTCD2	99	74.935	Ovis_aries
ENSRBIG00000032929	PTCD2	100	84.536	ENSPPAG00000028480	PTCD2	100	84.536	Pan_paniscus
ENSRBIG00000032929	PTCD2	100	84.278	ENSPTRG00000016968	PTCD2	100	84.278	Pan_troglodytes
ENSRBIG00000032929	PTCD2	88	90.145	ENSPANG00000006611	PTCD2	89	90.145	Papio_anubis
ENSRBIG00000032929	PTCD2	90	45.042	ENSPKIG00000019896	ptcd2	92	45.042	Paramormyrops_kingsleyae
ENSRBIG00000032929	PTCD2	79	57.605	ENSPSIG00000014559	PTCD2	96	57.605	Pelodiscus_sinensis
ENSRBIG00000032929	PTCD2	99	68.571	ENSPEMG00000000884	Ptcd2	100	68.571	Peromyscus_maniculatus_bairdii
ENSRBIG00000032929	PTCD2	99	55.729	ENSPCIG00000029047	PTCD2	100	55.729	Phascolarctos_cinereus
ENSRBIG00000032929	PTCD2	89	41.667	ENSPLAG00000010456	ptcd2	91	41.667	Poecilia_latipinna
ENSRBIG00000032929	PTCD2	89	41.667	ENSPREG00000021797	ptcd2	88	41.667	Poecilia_reticulata
ENSRBIG00000032929	PTCD2	99	72.610	ENSPPYG00000015543	PTCD2	99	72.610	Pongo_abelii
ENSRBIG00000032929	PTCD2	79	58.654	ENSPCAG00000006806	PTCD2	99	58.654	Procavia_capensis
ENSRBIG00000032929	PTCD2	99	70.207	ENSPVAG00000010935	PTCD2	99	70.207	Pteropus_vampyrus
ENSRBIG00000032929	PTCD2	96	40.267	ENSPNYG00000003122	ptcd2	96	40.267	Pundamilia_nyererei
ENSRBIG00000032929	PTCD2	98	44.819	ENSPNAG00000021490	ptcd2	99	45.078	Pygocentrus_nattereri
ENSRBIG00000032929	PTCD2	99	68.668	ENSRNOG00000028403	Ptcd2	100	68.668	Rattus_norvegicus
ENSRBIG00000032929	PTCD2	99	93.473	ENSRROG00000000080	PTCD2	100	93.473	Rhinopithecus_roxellana
ENSRBIG00000032929	PTCD2	99	79.634	ENSSBOG00000018911	PTCD2	100	79.634	Saimiri_boliviensis_boliviensis
ENSRBIG00000032929	PTCD2	99	53.906	ENSSHAG00000003833	PTCD2	99	53.906	Sarcophilus_harrisii
ENSRBIG00000032929	PTCD2	85	44.745	ENSSFOG00015015415	ptcd2	86	44.745	Scleropages_formosus
ENSRBIG00000032929	PTCD2	89	40.058	ENSSMAG00000010350	ptcd2	90	40.058	Scophthalmus_maximus
ENSRBIG00000032929	PTCD2	94	43.716	ENSSDUG00000008142	ptcd2	91	43.716	Seriola_dumerili
ENSRBIG00000032929	PTCD2	94	43.989	ENSSLDG00000015284	ptcd2	95	43.989	Seriola_lalandi_dorsalis
ENSRBIG00000032929	PTCD2	79	62.460	ENSSARG00000004983	PTCD2	99	62.460	Sorex_araneus
ENSRBIG00000032929	PTCD2	99	47.135	ENSSPUG00000000176	PTCD2	96	47.135	Sphenodon_punctatus
ENSRBIG00000032929	PTCD2	98	40.885	ENSSPAG00000008591	ptcd2	98	40.885	Stegastes_partitus
ENSRBIG00000032929	PTCD2	99	74.805	ENSSSCG00000016975	PTCD2	90	74.805	Sus_scrofa
ENSRBIG00000032929	PTCD2	88	48.696	ENSTGUG00000005705	PTCD2	99	48.696	Taeniopygia_guttata
ENSRBIG00000032929	PTCD2	99	72.021	ENSTBEG00000016559	PTCD2	99	72.021	Tupaia_belangeri
ENSRBIG00000032929	PTCD2	99	74.419	ENSTTRG00000011851	PTCD2	99	74.419	Tursiops_truncatus
ENSRBIG00000032929	PTCD2	100	72.165	ENSUAMG00000007583	PTCD2	91	72.165	Ursus_americanus
ENSRBIG00000032929	PTCD2	99	72.585	ENSUMAG00000007666	PTCD2	100	72.585	Ursus_maritimus
ENSRBIG00000032929	PTCD2	99	74.805	ENSVPAG00000009597	PTCD2	99	74.805	Vicugna_pacos
ENSRBIG00000032929	PTCD2	99	73.107	ENSVVUG00000007299	-	100	73.107	Vulpes_vulpes
ENSRBIG00000032929	PTCD2	90	48.718	ENSXETG00000031652	PTCD2	92	48.718	Xenopus_tropicalis
ENSRBIG00000032929	PTCD2	89	41.379	ENSXMAG00000005940	ptcd2	82	41.379	Xiphophorus_maculatus