EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000033317 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 127358 bases
Position: chrMCGX01006252.1:1308157-1435514
Accession: 108539635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000018795	R3H	PF01424.22	2.4e-11	1	1
ENSRBIP00000018838	R3H	PF01424.22	2.7e-11	1	1
ENSRBIP00000018787	R3H	PF01424.22	2.7e-11	1	1
ENSRBIP00000018846	R3H	PF01424.22	2.8e-11	1	1
ENSRBIP00000018850	R3H	PF01424.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000042713	R3HDM1-205	3285	XM_017888460	ENSRBIP00000018846	1094 (aa)	XP_017743949	A0A2K6L5P7
ENSRBIT00000042721	R3HDM1-207	1290	-	ENSRBIP00000018854	429 (aa)	-	A0A2K6L5Q3
ENSRBIT00000042717	R3HDM1-206	3285	XM_017888462	ENSRBIP00000018850	1094 (aa)	XP_017743951	A0A2K6L5Q5
ENSRBIT00000042705	R3HDM1-204	3117	-	ENSRBIP00000018838	1038 (aa)	-	A0A2K6L5Q2
ENSRBIT00000042694	R3HDM1-203	3894	-	ENSRBIP00000018827	447 (aa)	-	A0A2K6L5M8
ENSRBIT00000042662	R3HDM1-202	4204	XM_017888481	ENSRBIP00000018795	882 (aa)	XP_017743970	A0A2K6L5J6
ENSRBIT00000042654	R3HDM1-201	4459	XM_017888472	ENSRBIP00000018787	967 (aa)	XP_017743961	A0A2K6L5I8

Gene Model

Click here to download ENSRBIG00000033317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000033317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000033317	R3HDM1	64	68.613	ENSRBIG00000004058	ARPP21	91	50.911
ENSRBIG00000033317	R3HDM1	100	53.012	ENSRBIG00000037403	R3HDM2	94	55.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000033317	R3HDM1	100	99.631	ENSG00000048991	R3HDM1	100	98.042	Homo_sapiens
ENSRBIG00000033317	R3HDM1	87	71.942	ENSAPOG00000020850	r3hdm1	90	58.126	Acanthochromis_polyacanthus
ENSRBIG00000033317	R3HDM1	100	98.893	ENSAMEG00000014886	R3HDM1	100	94.208	Ailuropoda_melanoleuca
ENSRBIG00000033317	R3HDM1	86	71.942	ENSAOCG00000005192	r3hdm1	93	58.126	Amphiprion_ocellaris
ENSRBIG00000033317	R3HDM1	86	71.942	ENSAPEG00000016108	r3hdm1	85	71.942	Amphiprion_percula
ENSRBIG00000033317	R3HDM1	86	72.464	ENSATEG00000000232	r3hdm1	85	72.464	Anabas_testudineus
ENSRBIG00000033317	R3HDM1	100	80.082	ENSAPLG00000015231	R3HDM1	100	77.908	Anas_platyrhynchos
ENSRBIG00000033317	R3HDM1	100	92.989	ENSACAG00000001676	R3HDM1	100	74.498	Anolis_carolinensis
ENSRBIG00000033317	R3HDM1	100	98.893	ENSANAG00000035334	R3HDM1	100	97.716	Aotus_nancymaae
ENSRBIG00000033317	R3HDM1	86	71.942	ENSACLG00000027282	r3hdm1	85	71.942	Astatotilapia_calliptera
ENSRBIG00000033317	R3HDM1	91	78.676	ENSAMXG00000003536	r3hdm1	77	78.598	Astyanax_mexicanus
ENSRBIG00000033317	R3HDM1	100	84.559	ENSAMXG00000012861	R3HDM1	100	59.772	Astyanax_mexicanus
ENSRBIG00000033317	R3HDM1	100	98.155	ENSBTAG00000013302	R3HDM1	100	88.586	Bos_taurus
ENSRBIG00000033317	R3HDM1	100	99.262	ENSCJAG00000011718	R3HDM1	100	96.900	Callithrix_jacchus
ENSRBIG00000033317	R3HDM1	100	98.893	ENSCAFG00000005075	R3HDM1	100	94.389	Canis_familiaris
ENSRBIG00000033317	R3HDM1	100	98.893	ENSCAFG00020016119	R3HDM1	100	93.841	Canis_lupus_dingo
ENSRBIG00000033317	R3HDM1	100	97.786	ENSCHIG00000020851	R3HDM1	100	92.760	Capra_hircus
ENSRBIG00000033317	R3HDM1	99	98.876	ENSCPOG00000012784	R3HDM1	100	90.000	Cavia_porcellus
ENSRBIG00000033317	R3HDM1	100	99.262	ENSCCAG00000027199	R3HDM1	100	97.064	Cebus_capucinus
ENSRBIG00000033317	R3HDM1	99	99.630	ENSCATG00000023642	R3HDM1	100	98.695	Cercocebus_atys
ENSRBIG00000033317	R3HDM1	100	98.893	ENSCLAG00000007962	R3HDM1	100	88.127	Chinchilla_lanigera
ENSRBIG00000033317	R3HDM1	100	99.631	ENSCSAG00000016356	R3HDM1	100	94.894	Chlorocebus_sabaeus
ENSRBIG00000033317	R3HDM1	84	93.939	ENSCHOG00000013638	R3HDM1	91	81.806	Choloepus_hoffmanni
ENSRBIG00000033317	R3HDM1	100	91.513	ENSCPBG00000009645	R3HDM1	100	91.513	Chrysemys_picta_bellii
ENSRBIG00000033317	R3HDM1	100	100.000	ENSCANG00000034748	R3HDM1	100	98.858	Colobus_angolensis_palliatus
ENSRBIG00000033317	R3HDM1	99	97.417	ENSCGRG00001012357	R3hdm1	97	87.302	Cricetulus_griseus_chok1gshd
ENSRBIG00000033317	R3HDM1	100	97.417	ENSCGRG00000012080	R3hdm1	100	86.731	Cricetulus_griseus_crigri
ENSRBIG00000033317	R3HDM1	86	68.592	ENSCSEG00000008944	r3hdm1	79	68.592	Cynoglossus_semilaevis
ENSRBIG00000033317	R3HDM1	86	69.784	ENSCVAG00000007582	r3hdm1	78	69.784	Cyprinodon_variegatus
ENSRBIG00000033317	R3HDM1	55	54.545	ENSDARG00000061081	arpp21	95	34.177	Danio_rerio
ENSRBIG00000033317	R3HDM1	100	96.310	ENSDNOG00000000771	R3HDM1	100	89.829	Dasypus_novemcinctus
ENSRBIG00000033317	R3HDM1	95	96.324	ENSETEG00000013606	R3HDM1	100	82.443	Echinops_telfairi
ENSRBIG00000033317	R3HDM1	58	54.452	ENSEBUG00000014746	arpp21	96	41.527	Eptatretus_burgeri
ENSRBIG00000033317	R3HDM1	100	98.893	ENSEASG00005007392	R3HDM1	100	93.297	Equus_asinus_asinus
ENSRBIG00000033317	R3HDM1	100	98.893	ENSECAG00000019114	R3HDM1	100	93.569	Equus_caballus
ENSRBIG00000033317	R3HDM1	85	96.667	ENSEEUG00000012589	R3HDM1	89	85.049	Erinaceus_europaeus
ENSRBIG00000033317	R3HDM1	88	82.353	ENSELUG00000004909	R3HDM1	99	55.266	Esox_lucius
ENSRBIG00000033317	R3HDM1	99	52.385	ENSELUG00000014413	r3hdm1	97	53.466	Esox_lucius
ENSRBIG00000033317	R3HDM1	100	98.893	ENSFCAG00000027113	R3HDM1	100	93.756	Felis_catus
ENSRBIG00000033317	R3HDM1	100	98.524	ENSFDAG00000016478	R3HDM1	100	86.819	Fukomys_damarensis
ENSRBIG00000033317	R3HDM1	86	70.863	ENSFHEG00000018713	r3hdm1	100	46.660	Fundulus_heteroclitus
ENSRBIG00000033317	R3HDM1	54	81.579	ENSGMOG00000006042	-	74	63.913	Gadus_morhua
ENSRBIG00000033317	R3HDM1	100	77.441	ENSGALG00000012246	R3HDM1	96	86.716	Gallus_gallus
ENSRBIG00000033317	R3HDM1	86	71.223	ENSGAFG00000006203	r3hdm1	85	71.223	Gambusia_affinis
ENSRBIG00000033317	R3HDM1	92	71.223	ENSGACG00000014925	r3hdm1	88	71.223	Gasterosteus_aculeatus
ENSRBIG00000033317	R3HDM1	100	89.011	ENSGAGG00000007840	R3HDM1	100	77.236	Gopherus_agassizii
ENSRBIG00000033317	R3HDM1	100	99.631	ENSGGOG00000008156	R3HDM1	100	97.716	Gorilla_gorilla
ENSRBIG00000033317	R3HDM1	100	98.155	ENSHGLG00000015718	R3HDM1	94	92.816	Heterocephalus_glaber_female
ENSRBIG00000033317	R3HDM1	100	73.505	ENSHGLG00100015374	-	100	69.280	Heterocephalus_glaber_male
ENSRBIG00000033317	R3HDM1	100	98.155	ENSHGLG00100003184	-	100	86.467	Heterocephalus_glaber_male
ENSRBIG00000033317	R3HDM1	86	69.784	ENSHCOG00000013366	r3hdm1	82	70.863	Hippocampus_comes
ENSRBIG00000033317	R3HDM1	99	54.601	ENSIPUG00000013629	r3hdm1	90	73.432	Ictalurus_punctatus
ENSRBIG00000033317	R3HDM1	86	79.121	ENSIPUG00000001676	R3HDM1	98	57.248	Ictalurus_punctatus
ENSRBIG00000033317	R3HDM1	100	97.786	ENSSTOG00000007572	R3HDM1	100	93.744	Ictidomys_tridecemlineatus
ENSRBIG00000033317	R3HDM1	100	71.161	ENSLACG00000005334	R3HDM1	94	68.953	Latimeria_chalumnae
ENSRBIG00000033317	R3HDM1	100	67.341	ENSLOCG00000001641	r3hdm1	100	65.009	Lepisosteus_oculatus
ENSRBIG00000033317	R3HDM1	100	98.893	ENSLAFG00000009065	R3HDM1	100	90.598	Loxodonta_africana
ENSRBIG00000033317	R3HDM1	100	99.631	ENSMFAG00000030331	R3HDM1	100	98.695	Macaca_fascicularis
ENSRBIG00000033317	R3HDM1	100	99.631	ENSMMUG00000009844	R3HDM1	100	98.532	Macaca_mulatta
ENSRBIG00000033317	R3HDM1	100	99.631	ENSMNEG00000027793	R3HDM1	100	98.369	Macaca_nemestrina
ENSRBIG00000033317	R3HDM1	100	99.631	ENSMLEG00000043189	R3HDM1	100	98.858	Mandrillus_leucophaeus
ENSRBIG00000033317	R3HDM1	86	71.739	ENSMAMG00000004532	r3hdm1	78	71.739	Mastacembelus_armatus
ENSRBIG00000033317	R3HDM1	86	71.942	ENSMZEG00005003157	r3hdm1	82	71.942	Maylandia_zebra
ENSRBIG00000033317	R3HDM1	100	79.569	ENSMGAG00000012461	R3HDM1	100	77.457	Meleagris_gallopavo
ENSRBIG00000033317	R3HDM1	100	97.786	ENSMAUG00000010315	R3hdm1	100	87.043	Mesocricetus_auratus
ENSRBIG00000033317	R3HDM1	95	92.695	ENSMICG00000042655	-	100	89.204	Microcebus_murinus
ENSRBIG00000033317	R3HDM1	100	98.524	ENSMICG00000005900	-	100	92.405	Microcebus_murinus
ENSRBIG00000033317	R3HDM1	87	91.459	ENSMODG00000000923	R3HDM1	77	89.655	Monodelphis_domestica
ENSRBIG00000033317	R3HDM1	99	71.583	ENSMALG00000009000	r3hdm1	81	71.583	Monopterus_albus
ENSRBIG00000033317	R3HDM1	100	97.786	MGP_CAROLIEiJ_G0014543	R3hdm1	100	86.047	Mus_caroli
ENSRBIG00000033317	R3HDM1	100	97.786	ENSMUSG00000056211	R3hdm1	100	86.047	Mus_musculus
ENSRBIG00000033317	R3HDM1	100	97.786	MGP_PahariEiJ_G0027779	R3hdm1	100	85.382	Mus_pahari
ENSRBIG00000033317	R3HDM1	100	97.786	MGP_SPRETEiJ_G0015350	R3hdm1	100	86.047	Mus_spretus
ENSRBIG00000033317	R3HDM1	100	98.893	ENSMPUG00000002412	R3HDM1	100	93.937	Mustela_putorius_furo
ENSRBIG00000033317	R3HDM1	100	98.155	ENSMLUG00000013824	R3HDM1	100	92.405	Myotis_lucifugus
ENSRBIG00000033317	R3HDM1	100	99.631	ENSNLEG00000008622	R3HDM1	100	98.206	Nomascus_leucogenys
ENSRBIG00000033317	R3HDM1	89	71.792	ENSMEUG00000011784	R3HDM1	100	71.764	Notamacropus_eugenii
ENSRBIG00000033317	R3HDM1	100	98.893	ENSODEG00000008607	R3HDM1	94	92.593	Octodon_degus
ENSRBIG00000033317	R3HDM1	99	70.922	ENSONIG00000012017	r3hdm1	87	70.922	Oreochromis_niloticus
ENSRBIG00000033317	R3HDM1	100	92.989	ENSOANG00000007987	R3HDM1	100	80.288	Ornithorhynchus_anatinus
ENSRBIG00000033317	R3HDM1	87	97.786	ENSOCUG00000017366	R3HDM1	98	91.574	Oryctolagus_cuniculus
ENSRBIG00000033317	R3HDM1	86	70.504	ENSORLG00000004297	r3hdm1	81	70.504	Oryzias_latipes
ENSRBIG00000033317	R3HDM1	88	70.863	ENSORLG00015017355	r3hdm1	82	70.863	Oryzias_latipes_hsok
ENSRBIG00000033317	R3HDM1	100	99.631	ENSOGAG00000003136	R3HDM1	100	92.036	Otolemur_garnettii
ENSRBIG00000033317	R3HDM1	100	97.786	ENSOARG00000010788	R3HDM1	100	92.579	Ovis_aries
ENSRBIG00000033317	R3HDM1	100	99.631	ENSPPAG00000027858	R3HDM1	100	98.369	Pan_paniscus
ENSRBIG00000033317	R3HDM1	100	98.524	ENSPPRG00000002626	R3HDM1	100	93.484	Panthera_pardus
ENSRBIG00000033317	R3HDM1	100	98.893	ENSPTIG00000016581	R3HDM1	100	93.484	Panthera_tigris_altaica
ENSRBIG00000033317	R3HDM1	100	99.631	ENSPTRG00000012494	R3HDM1	100	98.369	Pan_troglodytes
ENSRBIG00000033317	R3HDM1	100	99.631	ENSPANG00000026448	R3HDM1	100	98.858	Papio_anubis
ENSRBIG00000033317	R3HDM1	100	80.147	ENSPKIG00000004328	r3hdm1	87	80.515	Paramormyrops_kingsleyae
ENSRBIG00000033317	R3HDM1	100	79.651	ENSPSIG00000012915	R3HDM1	100	78.069	Pelodiscus_sinensis
ENSRBIG00000033317	R3HDM1	100	97.048	ENSPEMG00000015187	R3hdm1	100	86.711	Peromyscus_maniculatus_bairdii
ENSRBIG00000033317	R3HDM1	91	61.392	ENSPMAG00000003369	-	99	42.830	Petromyzon_marinus
ENSRBIG00000033317	R3HDM1	100	94.485	ENSPCIG00000002491	R3HDM1	100	87.961	Phascolarctos_cinereus
ENSRBIG00000033317	R3HDM1	86	69.675	ENSPFOG00000015036	r3hdm1	93	55.431	Poecilia_formosa
ENSRBIG00000033317	R3HDM1	86	69.675	ENSPLAG00000018042	r3hdm1	81	69.675	Poecilia_latipinna
ENSRBIG00000033317	R3HDM1	86	69.675	ENSPMEG00000023947	r3hdm1	81	69.675	Poecilia_mexicana
ENSRBIG00000033317	R3HDM1	86	70.863	ENSPREG00000007902	r3hdm1	81	70.863	Poecilia_reticulata
ENSRBIG00000033317	R3HDM1	100	97.553	ENSPPYG00000012815	R3HDM1	100	96.192	Pongo_abelii
ENSRBIG00000033317	R3HDM1	92	97.436	ENSPCAG00000006208	R3HDM1	100	79.710	Procavia_capensis
ENSRBIG00000033317	R3HDM1	99	98.889	ENSPCOG00000012698	R3HDM1	100	93.171	Propithecus_coquereli
ENSRBIG00000033317	R3HDM1	96	98.750	ENSPVAG00000006098	R3HDM1	100	84.964	Pteropus_vampyrus
ENSRBIG00000033317	R3HDM1	66	38.441	ENSPNAG00000004162	arpp21	85	39.596	Pygocentrus_nattereri
ENSRBIG00000033317	R3HDM1	95	77.860	ENSPNAG00000013952	r3hdm1	95	56.868	Pygocentrus_nattereri
ENSRBIG00000033317	R3HDM1	92	80.586	ENSPNAG00000005436	R3HDM1	95	80.515	Pygocentrus_nattereri
ENSRBIG00000033317	R3HDM1	100	97.417	ENSRNOG00000004099	R3hdm1	100	83.831	Rattus_norvegicus
ENSRBIG00000033317	R3HDM1	100	100.000	ENSRROG00000034534	R3HDM1	100	99.674	Rhinopithecus_roxellana
ENSRBIG00000033317	R3HDM1	100	99.262	ENSSBOG00000020389	R3HDM1	100	96.574	Saimiri_boliviensis_boliviensis
ENSRBIG00000033317	R3HDM1	100	83.934	ENSSHAG00000016999	R3HDM1	100	83.363	Sarcophilus_harrisii
ENSRBIG00000033317	R3HDM1	100	63.163	ENSSFOG00015014134	r3hdm1	87	84.191	Scleropages_formosus
ENSRBIG00000033317	R3HDM1	100	57.751	ENSSFOG00015019851	-	100	55.142	Scleropages_formosus
ENSRBIG00000033317	R3HDM1	99	71.636	ENSSMAG00000001669	r3hdm1	99	44.090	Scophthalmus_maximus
ENSRBIG00000033317	R3HDM1	86	72.202	ENSSDUG00000010749	r3hdm1	81	72.202	Seriola_dumerili
ENSRBIG00000033317	R3HDM1	99	72.202	ENSSLDG00000004499	r3hdm1	80	72.202	Seriola_lalandi_dorsalis
ENSRBIG00000033317	R3HDM1	71	79.348	ENSSARG00000000352	-	69	79.348	Sorex_araneus
ENSRBIG00000033317	R3HDM1	100	80.390	ENSSPUG00000004167	R3HDM1	100	78.990	Sphenodon_punctatus
ENSRBIG00000033317	R3HDM1	86	71.942	ENSSPAG00000004648	r3hdm1	82	71.942	Stegastes_partitus
ENSRBIG00000033317	R3HDM1	100	98.524	ENSSSCG00000015692	R3HDM1	100	93.756	Sus_scrofa
ENSRBIG00000033317	R3HDM1	100	74.127	ENSTGUG00000011750	R3HDM1	100	72.227	Taeniopygia_guttata
ENSRBIG00000033317	R3HDM1	86	69.928	ENSTRUG00000011654	r3hdm1	80	69.928	Takifugu_rubripes
ENSRBIG00000033317	R3HDM1	87	70.819	ENSTNIG00000010362	r3hdm1	99	44.724	Tetraodon_nigroviridis
ENSRBIG00000033317	R3HDM1	100	98.524	ENSTTRG00000003935	R3HDM1	100	86.322	Tursiops_truncatus
ENSRBIG00000033317	R3HDM1	70	93.188	ENSUAMG00000024806	R3HDM1	93	93.445	Ursus_americanus
ENSRBIG00000033317	R3HDM1	100	94.227	ENSUMAG00000005552	R3HDM1	100	89.919	Ursus_maritimus
ENSRBIG00000033317	R3HDM1	100	94.096	ENSVPAG00000007333	R3HDM1	92	91.228	Vicugna_pacos
ENSRBIG00000033317	R3HDM1	100	98.893	ENSVVUG00000006457	R3HDM1	100	89.886	Vulpes_vulpes
ENSRBIG00000033317	R3HDM1	88	71.279	ENSXETG00000019330	r3hdm1	100	66.231	Xenopus_tropicalis
ENSRBIG00000033317	R3HDM1	74	50.000	ENSXCOG00000017448	r3hdm1	94	48.387	Xiphophorus_couchianus
ENSRBIG00000033317	R3HDM1	86	70.504	ENSXMAG00000007885	r3hdm1	79	70.504	Xiphophorus_maculatus