EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000033423 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 36801 bases
Position: chrMCGX01007787.1:384685-421485
Accession: 108542445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000018870	TruB_N	PF01509.18	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000042737	TRUB1-201	975	XM_017892462	ENSRBIP00000018870	324 (aa)	XP_017747951	A0A2K6L5S3

Gene Model

Click here to download ENSRBIG00000033423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000033423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000033423	TRUB1	100	87.429	ENSG00000165832	TRUB1	100	87.429	Homo_sapiens
ENSRBIG00000033423	TRUB1	68	59.919	ENSAPOG00000020565	trub1	89	60.569	Acanthochromis_polyacanthus
ENSRBIG00000033423	TRUB1	96	83.432	ENSAMEG00000014931	TRUB1	99	83.191	Ailuropoda_melanoleuca
ENSRBIG00000033423	TRUB1	80	50.000	ENSACIG00000003060	trub1	94	50.000	Amphilophus_citrinellus
ENSRBIG00000033423	TRUB1	68	59.514	ENSAOCG00000017188	trub1	89	60.569	Amphiprion_ocellaris
ENSRBIG00000033423	TRUB1	68	58.871	ENSAPEG00000015209	trub1	89	60.163	Amphiprion_percula
ENSRBIG00000033423	TRUB1	66	60.082	ENSATEG00000023291	trub1	86	60.082	Anabas_testudineus
ENSRBIG00000033423	TRUB1	77	66.545	ENSAPLG00000006808	TRUB1	99	66.545	Anas_platyrhynchos
ENSRBIG00000033423	TRUB1	75	62.454	ENSACAG00000009282	TRUB1	97	62.454	Anolis_carolinensis
ENSRBIG00000033423	TRUB1	96	87.798	ENSANAG00000022870	TRUB1	100	87.179	Aotus_nancymaae
ENSRBIG00000033423	TRUB1	70	58.661	ENSACLG00000000823	trub1	91	58.661	Astatotilapia_calliptera
ENSRBIG00000033423	TRUB1	76	57.143	ENSAMXG00000015845	trub1	92	56.679	Astyanax_mexicanus
ENSRBIG00000033423	TRUB1	98	82.456	ENSBTAG00000012955	TRUB1	99	82.051	Bos_taurus
ENSRBIG00000033423	TRUB1	100	87.179	ENSCJAG00000047815	TRUB1	100	87.179	Callithrix_jacchus
ENSRBIG00000033423	TRUB1	99	83.381	ENSCAFG00000011688	TRUB1	99	83.381	Canis_familiaris
ENSRBIG00000033423	TRUB1	99	83.668	ENSCAFG00020013237	TRUB1	99	83.668	Canis_lupus_dingo
ENSRBIG00000033423	TRUB1	98	83.041	ENSCHIG00000020884	TRUB1	99	82.857	Capra_hircus
ENSRBIG00000033423	TRUB1	100	81.197	ENSTSYG00000000446	TRUB1	100	82.336	Carlito_syrichta
ENSRBIG00000033423	TRUB1	70	75.304	ENSCAPG00000017088	TRUB1	100	75.304	Cavia_aperea
ENSRBIG00000033423	TRUB1	67	69.198	ENSCPOG00000030129	-	82	68.776	Cavia_porcellus
ENSRBIG00000033423	TRUB1	67	75.527	ENSCPOG00000040236	-	97	75.527	Cavia_porcellus
ENSRBIG00000033423	TRUB1	96	87.240	ENSCCAG00000028842	TRUB1	100	86.325	Cebus_capucinus
ENSRBIG00000033423	TRUB1	100	89.429	ENSCATG00000033431	TRUB1	100	89.429	Cercocebus_atys
ENSRBIG00000033423	TRUB1	67	78.903	ENSCLAG00000008664	TRUB1	97	78.903	Chinchilla_lanigera
ENSRBIG00000033423	TRUB1	100	89.429	ENSCSAG00000004891	TRUB1	100	89.429	Chlorocebus_sabaeus
ENSRBIG00000033423	TRUB1	99	75.145	ENSCHOG00000011931	TRUB1	99	75.145	Choloepus_hoffmanni
ENSRBIG00000033423	TRUB1	76	70.956	ENSCPBG00000003051	TRUB1	94	70.956	Chrysemys_picta_bellii
ENSRBIG00000033423	TRUB1	100	89.714	ENSCANG00000029445	TRUB1	100	89.714	Colobus_angolensis_palliatus
ENSRBIG00000033423	TRUB1	70	75.197	ENSCGRG00001016772	-	90	68.687	Cricetulus_griseus_chok1gshd
ENSRBIG00000033423	TRUB1	78	72.325	ENSCGRG00001010322	-	79	72.632	Cricetulus_griseus_chok1gshd
ENSRBIG00000033423	TRUB1	78	77.500	ENSCGRG00000010806	Trub1	91	77.441	Cricetulus_griseus_crigri
ENSRBIG00000033423	TRUB1	71	52.713	ENSCSEG00000011261	trub1	97	48.515	Cynoglossus_semilaevis
ENSRBIG00000033423	TRUB1	69	58.566	ENSCVAG00000008791	trub1	79	57.308	Cyprinodon_variegatus
ENSRBIG00000033423	TRUB1	72	59.004	ENSDARG00000053805	trub1	99	52.809	Danio_rerio
ENSRBIG00000033423	TRUB1	97	79.941	ENSDNOG00000001069	TRUB1	99	79.656	Dasypus_novemcinctus
ENSRBIG00000033423	TRUB1	99	79.656	ENSDORG00000010431	Trub1	99	78.797	Dipodomys_ordii
ENSRBIG00000033423	TRUB1	80	74.033	ENSETEG00000009183	TRUB1	74	75.138	Echinops_telfairi
ENSRBIG00000033423	TRUB1	96	83.333	ENSEASG00005014739	TRUB1	99	83.095	Equus_asinus_asinus
ENSRBIG00000033423	TRUB1	96	83.333	ENSECAG00000007177	TRUB1	99	83.095	Equus_caballus
ENSRBIG00000033423	TRUB1	99	73.464	ENSEEUG00000013993	TRUB1	99	74.302	Erinaceus_europaeus
ENSRBIG00000033423	TRUB1	68	60.324	ENSELUG00000000502	trub1	86	60.324	Esox_lucius
ENSRBIG00000033423	TRUB1	85	84.667	ENSFCAG00000031927	TRUB1	99	82.471	Felis_catus
ENSRBIG00000033423	TRUB1	66	66.667	ENSFALG00000002232	TRUB1	92	66.667	Ficedula_albicollis
ENSRBIG00000033423	TRUB1	67	75.949	ENSFDAG00000008140	TRUB1	97	75.949	Fukomys_damarensis
ENSRBIG00000033423	TRUB1	66	64.865	ENSFHEG00000004016	trub1	84	57.490	Fundulus_heteroclitus
ENSRBIG00000033423	TRUB1	76	66.544	ENSGALG00000009091	TRUB1	96	66.544	Gallus_gallus
ENSRBIG00000033423	TRUB1	66	56.667	ENSGAFG00000009193	trub1	84	56.667	Gambusia_affinis
ENSRBIG00000033423	TRUB1	52	56.345	ENSGACG00000015387	trub1	96	56.345	Gasterosteus_aculeatus
ENSRBIG00000033423	TRUB1	81	68.966	ENSGAGG00000009758	TRUB1	81	69.366	Gopherus_agassizii
ENSRBIG00000033423	TRUB1	100	88.000	ENSGGOG00000004583	TRUB1	100	88.000	Gorilla_gorilla
ENSRBIG00000033423	TRUB1	70	58.661	ENSHBUG00000016787	trub1	91	58.661	Haplochromis_burtoni
ENSRBIG00000033423	TRUB1	99	77.364	ENSHGLG00000015314	TRUB1	99	77.364	Heterocephalus_glaber_female
ENSRBIG00000033423	TRUB1	67	75.105	ENSHGLG00100009183	TRUB1	97	75.105	Heterocephalus_glaber_male
ENSRBIG00000033423	TRUB1	68	58.704	ENSHCOG00000017877	trub1	89	58.704	Hippocampus_comes
ENSRBIG00000033423	TRUB1	74	58.364	ENSIPUG00000017559	trub1	97	57.554	Ictalurus_punctatus
ENSRBIG00000033423	TRUB1	89	83.439	ENSSTOG00000003641	TRUB1	99	79.083	Ictidomys_tridecemlineatus
ENSRBIG00000033423	TRUB1	99	74.785	ENSJJAG00000011800	Trub1	99	74.499	Jaculus_jaculus
ENSRBIG00000033423	TRUB1	70	57.915	ENSKMAG00000006232	trub1	92	57.915	Kryptolebias_marmoratus
ENSRBIG00000033423	TRUB1	68	59.677	ENSLBEG00000026722	trub1	92	56.343	Labrus_bergylta
ENSRBIG00000033423	TRUB1	77	65.108	ENSLACG00000014885	TRUB1	92	65.108	Latimeria_chalumnae
ENSRBIG00000033423	TRUB1	76	60.727	ENSLOCG00000012979	trub1	93	60.727	Lepisosteus_oculatus
ENSRBIG00000033423	TRUB1	100	69.832	ENSLAFG00000015452	TRUB1	100	70.670	Loxodonta_africana
ENSRBIG00000033423	TRUB1	100	89.143	ENSMFAG00000031767	TRUB1	100	89.143	Macaca_fascicularis
ENSRBIG00000033423	TRUB1	100	89.429	ENSMMUG00000001902	TRUB1	100	89.429	Macaca_mulatta
ENSRBIG00000033423	TRUB1	100	84.857	ENSMNEG00000044646	TRUB1	100	84.857	Macaca_nemestrina
ENSRBIG00000033423	TRUB1	100	89.429	ENSMLEG00000042655	TRUB1	100	89.429	Mandrillus_leucophaeus
ENSRBIG00000033423	TRUB1	70	58.268	ENSMZEG00005024095	trub1	91	58.268	Maylandia_zebra
ENSRBIG00000033423	TRUB1	76	65.074	ENSMGAG00000011135	TRUB1	93	65.074	Meleagris_gallopavo
ENSRBIG00000033423	TRUB1	84	76.451	ENSMAUG00000011101	Trub1	89	76.610	Mesocricetus_auratus
ENSRBIG00000033423	TRUB1	99	85.387	ENSMICG00000016324	TRUB1	99	85.387	Microcebus_murinus
ENSRBIG00000033423	TRUB1	91	73.846	ENSMOCG00000017759	Trub1	99	70.201	Microtus_ochrogaster
ENSRBIG00000033423	TRUB1	80	72.028	ENSMODG00000009676	TRUB1	81	70.608	Monodelphis_domestica
ENSRBIG00000033423	TRUB1	99	71.633	MGP_CAROLIEiJ_G0023100	Trub1	99	71.060	Mus_caroli
ENSRBIG00000033423	TRUB1	99	70.487	ENSMUSG00000025086	Trub1	99	69.914	Mus_musculus
ENSRBIG00000033423	TRUB1	99	71.633	MGP_PahariEiJ_G0014588	Trub1	99	71.060	Mus_pahari
ENSRBIG00000033423	TRUB1	99	70.774	MGP_SPRETEiJ_G0024021	Trub1	99	70.201	Mus_spretus
ENSRBIG00000033423	TRUB1	85	86.711	ENSMPUG00000003556	TRUB1	99	84.814	Mustela_putorius_furo
ENSRBIG00000033423	TRUB1	95	78.507	ENSMLUG00000017686	TRUB1	100	76.638	Myotis_lucifugus
ENSRBIG00000033423	TRUB1	99	75.931	ENSNGAG00000018682	Trub1	99	75.931	Nannospalax_galili
ENSRBIG00000033423	TRUB1	68	59.274	ENSNBRG00000023393	trub1	88	59.274	Neolamprologus_brichardi
ENSRBIG00000033423	TRUB1	96	88.427	ENSNLEG00000016345	TRUB1	100	88.286	Nomascus_leucogenys
ENSRBIG00000033423	TRUB1	54	75.124	ENSMEUG00000006603	TRUB1	78	72.986	Notamacropus_eugenii
ENSRBIG00000033423	TRUB1	85	75.748	ENSOPRG00000009371	TRUB1	87	75.667	Ochotona_princeps
ENSRBIG00000033423	TRUB1	99	76.218	ENSODEG00000010854	TRUB1	99	76.218	Octodon_degus
ENSRBIG00000033423	TRUB1	68	59.274	ENSONIG00000007249	trub1	89	59.274	Oreochromis_niloticus
ENSRBIG00000033423	TRUB1	77	70.073	ENSOANG00000001556	TRUB1	93	68.198	Ornithorhynchus_anatinus
ENSRBIG00000033423	TRUB1	85	78.073	ENSOCUG00000009456	TRUB1	99	73.926	Oryctolagus_cuniculus
ENSRBIG00000033423	TRUB1	66	60.494	ENSORLG00000029719	trub1	86	60.494	Oryzias_latipes
ENSRBIG00000033423	TRUB1	66	60.082	ENSORLG00020016767	trub1	85	60.082	Oryzias_latipes_hni
ENSRBIG00000033423	TRUB1	66	60.082	ENSORLG00015014728	trub1	86	60.082	Oryzias_latipes_hsok
ENSRBIG00000033423	TRUB1	72	58.238	ENSOMEG00000014556	trub1	89	58.527	Oryzias_melastigma
ENSRBIG00000033423	TRUB1	99	83.954	ENSOGAG00000015895	TRUB1	99	83.954	Otolemur_garnettii
ENSRBIG00000033423	TRUB1	83	83.444	ENSOARG00000015591	TRUB1	99	78.652	Ovis_aries
ENSRBIG00000033423	TRUB1	100	88.000	ENSPPAG00000043645	TRUB1	100	88.000	Pan_paniscus
ENSRBIG00000033423	TRUB1	95	82.090	ENSPPRG00000007096	TRUB1	99	81.897	Panthera_pardus
ENSRBIG00000033423	TRUB1	95	82.388	ENSPTIG00000006378	TRUB1	99	82.184	Panthera_tigris_altaica
ENSRBIG00000033423	TRUB1	100	88.000	ENSPTRG00000002964	TRUB1	100	88.000	Pan_troglodytes
ENSRBIG00000033423	TRUB1	100	89.429	ENSPANG00000020712	TRUB1	100	89.429	Papio_anubis
ENSRBIG00000033423	TRUB1	76	68.750	ENSPSIG00000012877	TRUB1	93	68.750	Pelodiscus_sinensis
ENSRBIG00000033423	TRUB1	68	58.776	ENSPMGG00000000075	trub1	88	58.776	Periophthalmus_magnuspinnatus
ENSRBIG00000033423	TRUB1	85	76.000	ENSPEMG00000011156	Trub1	99	70.201	Peromyscus_maniculatus_bairdii
ENSRBIG00000033423	TRUB1	80	71.329	ENSPCIG00000009729	TRUB1	79	70.548	Phascolarctos_cinereus
ENSRBIG00000033423	TRUB1	68	57.085	ENSPFOG00000009950	trub1	90	57.085	Poecilia_formosa
ENSRBIG00000033423	TRUB1	68	57.085	ENSPLAG00000013855	trub1	86	57.085	Poecilia_latipinna
ENSRBIG00000033423	TRUB1	68	57.085	ENSPMEG00000009064	trub1	88	57.085	Poecilia_mexicana
ENSRBIG00000033423	TRUB1	68	57.895	ENSPREG00000003343	trub1	88	57.895	Poecilia_reticulata
ENSRBIG00000033423	TRUB1	96	87.834	ENSPPYG00000002676	TRUB1	100	87.714	Pongo_abelii
ENSRBIG00000033423	TRUB1	100	65.826	ENSPCAG00000008427	TRUB1	100	66.106	Procavia_capensis
ENSRBIG00000033423	TRUB1	99	80.229	ENSPCOG00000024360	TRUB1	99	80.229	Propithecus_coquereli
ENSRBIG00000033423	TRUB1	73	79.924	ENSPVAG00000007575	TRUB1	100	79.924	Pteropus_vampyrus
ENSRBIG00000033423	TRUB1	70	58.661	ENSPNYG00000018614	trub1	91	58.661	Pundamilia_nyererei
ENSRBIG00000033423	TRUB1	72	51.145	ENSPNAG00000006881	trub1	88	50.365	Pygocentrus_nattereri
ENSRBIG00000033423	TRUB1	99	72.779	ENSRNOG00000017321	Trub1	99	71.347	Rattus_norvegicus
ENSRBIG00000033423	TRUB1	100	90.286	ENSRROG00000033902	TRUB1	100	90.286	Rhinopithecus_roxellana
ENSRBIG00000033423	TRUB1	96	87.537	ENSSBOG00000024237	TRUB1	100	86.610	Saimiri_boliviensis_boliviensis
ENSRBIG00000033423	TRUB1	70	68.750	ENSSHAG00000009346	TRUB1	86	68.750	Sarcophilus_harrisii
ENSRBIG00000033423	TRUB1	67	60.816	ENSSFOG00015022124	trub1	83	60.816	Scleropages_formosus
ENSRBIG00000033423	TRUB1	68	59.274	ENSSMAG00000001020	trub1	88	59.274	Scophthalmus_maximus
ENSRBIG00000033423	TRUB1	66	59.504	ENSSDUG00000016414	trub1	88	59.677	Seriola_dumerili
ENSRBIG00000033423	TRUB1	66	59.917	ENSSLDG00000015486	trub1	88	60.081	Seriola_lalandi_dorsalis
ENSRBIG00000033423	TRUB1	84	67.340	ENSSPUG00000001642	TRUB1	96	69.534	Sphenodon_punctatus
ENSRBIG00000033423	TRUB1	72	59.615	ENSSPAG00000001217	trub1	92	59.615	Stegastes_partitus
ENSRBIG00000033423	TRUB1	99	78.510	ENSSSCG00000010653	TRUB1	99	78.510	Sus_scrofa
ENSRBIG00000033423	TRUB1	75	67.407	ENSTGUG00000010971	TRUB1	97	67.279	Taeniopygia_guttata
ENSRBIG00000033423	TRUB1	70	68.379	ENSTBEG00000002880	TRUB1	99	68.379	Tupaia_belangeri
ENSRBIG00000033423	TRUB1	69	77.689	ENSTTRG00000005767	TRUB1	100	78.030	Tursiops_truncatus
ENSRBIG00000033423	TRUB1	96	84.570	ENSUAMG00000024876	TRUB1	99	84.527	Ursus_americanus
ENSRBIG00000033423	TRUB1	83	86.102	ENSUMAG00000002411	TRUB1	99	80.802	Ursus_maritimus
ENSRBIG00000033423	TRUB1	99	82.808	ENSVPAG00000005507	TRUB1	99	82.808	Vicugna_pacos
ENSRBIG00000033423	TRUB1	99	82.235	ENSVVUG00000010085	TRUB1	83	81.948	Vulpes_vulpes
ENSRBIG00000033423	TRUB1	76	56.985	ENSXETG00000023828	trub1	98	56.985	Xenopus_tropicalis
ENSRBIG00000033423	TRUB1	66	56.432	ENSXCOG00000017847	trub1	86	55.918	Xiphophorus_couchianus
ENSRBIG00000033423	TRUB1	68	56.275	ENSXMAG00000014701	trub1	88	56.275	Xiphophorus_maculatus