EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000033562 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 23874 bases
Position: chrMCGX01011610.1:3391688-3415561
Accession: 108514331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000019408	ResIII	PF04851.15	2.7e-08	1	1
ENSRBIP00000019402	ResIII	PF04851.15	2.9e-08	1	1
ENSRBIP00000019398	ResIII	PF04851.15	3e-08	1	1
ENSRBIP00000019393	ResIII	PF04851.15	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000043266	CHD3-202	6039	XM_017850483	ENSRBIP00000019393	2012 (aa)	XP_017705972	A0A2K6L7D5
ENSRBIT00000043284	CHD3-206	1230	-	ENSRBIP00000019411	409 (aa)	-	A0A2K6L7B8
ENSRBIT00000043271	CHD3-203	6036	-	ENSRBIP00000019398	2011 (aa)	-	A0A2K6L7E5
ENSRBIT00000043281	CHD3-205	5523	-	ENSRBIP00000019408	1840 (aa)	-	A0A2K6L7F5
ENSRBIT00000043275	CHD3-204	5937	-	ENSRBIP00000019402	1978 (aa)	-	A0A2K6L7C0
ENSRBIT00000043114	CHD3-201	7202	-	ENSRBIP00000019244	293 (aa)	-	A0A2K6L6T0

Gene Model

Click here to download ENSRBIG00000033562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000033562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000033562	CHD3	93	68.346	ENSRBIG00000041491	-	95	68.699
ENSRBIG00000033562	CHD3	98	66.789	ENSRBIG00000032140	CHD5	96	68.501

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000033562	CHD3	100	96.444	ENSG00000170004	CHD3	100	96.444	Homo_sapiens
ENSRBIG00000033562	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSRBIG00000033562	CHD3	75	94.953	ENSAMEG00000003025	-	100	94.953	Ailuropoda_melanoleuca
ENSRBIG00000033562	CHD3	90	76.102	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSRBIG00000033562	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.250	Amphiprion_ocellaris
ENSRBIG00000033562	CHD3	91	80.756	ENSAPEG00000006341	chd3	96	71.484	Amphiprion_percula
ENSRBIG00000033562	CHD3	91	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSRBIG00000033562	CHD3	99	83.057	ENSACAG00000004276	CHD3	96	82.207	Anolis_carolinensis
ENSRBIG00000033562	CHD3	99	95.687	ENSANAG00000034323	CHD3	99	95.897	Aotus_nancymaae
ENSRBIG00000033562	CHD3	94	78.816	ENSACLG00000009222	chd3	99	72.831	Astatotilapia_calliptera
ENSRBIG00000033562	CHD3	99	94.669	ENSBTAG00000014377	CHD3	97	95.116	Bos_taurus
ENSRBIG00000033562	CHD3	99	96.045	ENSCJAG00000014766	CHD3	99	96.045	Callithrix_jacchus
ENSRBIG00000033562	CHD3	100	94.719	ENSCAFG00000016859	CHD3	100	94.719	Canis_familiaris
ENSRBIG00000033562	CHD3	99	94.666	ENSCAFG00020007422	CHD3	100	94.941	Canis_lupus_dingo
ENSRBIG00000033562	CHD3	99	95.359	ENSCHIG00000016737	CHD3	100	95.359	Capra_hircus
ENSRBIG00000033562	CHD3	100	95.683	ENSTSYG00000035658	CHD3	100	95.683	Carlito_syrichta
ENSRBIG00000033562	CHD3	99	91.864	ENSCAPG00000014864	CHD3	99	91.625	Cavia_aperea
ENSRBIG00000033562	CHD3	99	94.558	ENSCPOG00000022653	CHD3	99	94.103	Cavia_porcellus
ENSRBIG00000033562	CHD3	100	95.901	ENSCCAG00000034792	CHD3	100	95.901	Cebus_capucinus
ENSRBIG00000033562	CHD3	100	96.741	ENSCATG00000041717	CHD3	100	96.741	Cercocebus_atys
ENSRBIG00000033562	CHD3	99	94.666	ENSCLAG00000010523	CHD3	100	95.250	Chinchilla_lanigera
ENSRBIG00000033562	CHD3	99	96.011	ENSCSAG00000011122	CHD3	100	96.540	Chlorocebus_sabaeus
ENSRBIG00000033562	CHD3	92	83.856	ENSCPBG00000011966	CHD3	99	85.015	Chrysemys_picta_bellii
ENSRBIG00000033562	CHD3	100	96.701	ENSCANG00000037641	CHD3	100	96.701	Colobus_angolensis_palliatus
ENSRBIG00000033562	CHD3	99	93.753	ENSCGRG00001011306	Chd3	100	94.334	Cricetulus_griseus_chok1gshd
ENSRBIG00000033562	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSRBIG00000033562	CHD3	90	76.743	ENSCSEG00000004489	chd3	99	75.455	Cynoglossus_semilaevis
ENSRBIG00000033562	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.996	Cyprinodon_variegatus
ENSRBIG00000033562	CHD3	94	78.064	ENSDARG00000021405	chd3	95	79.461	Danio_rerio
ENSRBIG00000033562	CHD3	98	80.769	ENSDNOG00000047846	CHD3	98	80.769	Dasypus_novemcinctus
ENSRBIG00000033562	CHD3	99	94.070	ENSDORG00000010713	Chd3	100	94.686	Dipodomys_ordii
ENSRBIG00000033562	CHD3	98	89.703	ENSETEG00000017733	CHD3	100	89.037	Echinops_telfairi
ENSRBIG00000033562	CHD3	59	75.357	ENSEBUG00000008310	chd3	99	68.726	Eptatretus_burgeri
ENSRBIG00000033562	CHD3	99	94.989	ENSEASG00005019360	CHD3	100	95.264	Equus_asinus_asinus
ENSRBIG00000033562	CHD3	99	95.043	ENSECAG00000010051	CHD3	100	95.318	Equus_caballus
ENSRBIG00000033562	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSRBIG00000033562	CHD3	84	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSRBIG00000033562	CHD3	99	94.504	ENSFCAG00000009629	CHD3	96	95.035	Felis_catus
ENSRBIG00000033562	CHD3	99	94.612	ENSFDAG00000008220	CHD3	99	92.380	Fukomys_damarensis
ENSRBIG00000033562	CHD3	90	77.579	ENSGMOG00000013599	chd3	91	78.175	Gadus_morhua
ENSRBIG00000033562	CHD3	58	75.856	ENSGAFG00000004055	chd3	99	75.171	Gambusia_affinis
ENSRBIG00000033562	CHD3	99	70.911	ENSGACG00000019275	chd3	100	69.426	Gasterosteus_aculeatus
ENSRBIG00000033562	CHD3	82	83.410	ENSGAGG00000013164	CHD3	97	85.462	Gopherus_agassizii
ENSRBIG00000033562	CHD3	100	96.296	ENSGGOG00000013496	CHD3	100	96.296	Gorilla_gorilla
ENSRBIG00000033562	CHD3	99	94.717	ENSHGLG00000012017	CHD3	99	94.315	Heterocephalus_glaber_female
ENSRBIG00000033562	CHD3	88	88.037	ENSHGLG00100013902	CHD3	99	87.140	Heterocephalus_glaber_male
ENSRBIG00000033562	CHD3	96	71.914	ENSHCOG00000010170	chd3	96	70.997	Hippocampus_comes
ENSRBIG00000033562	CHD3	90	77.723	ENSIPUG00000003271	chd3	96	77.732	Ictalurus_punctatus
ENSRBIG00000033562	CHD3	99	95.304	ENSSTOG00000025907	CHD3	100	95.657	Ictidomys_tridecemlineatus
ENSRBIG00000033562	CHD3	100	93.534	ENSJJAG00000017633	Chd3	100	94.535	Jaculus_jaculus
ENSRBIG00000033562	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	73.684	Kryptolebias_marmoratus
ENSRBIG00000033562	CHD3	92	72.334	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSRBIG00000033562	CHD3	98	72.536	ENSLACG00000008031	CHD3	99	72.121	Latimeria_chalumnae
ENSRBIG00000033562	CHD3	99	75.969	ENSLOCG00000013965	chd3	97	74.988	Lepisosteus_oculatus
ENSRBIG00000033562	CHD3	91	96.275	ENSLAFG00000000572	CHD3	96	96.275	Loxodonta_africana
ENSRBIG00000033562	CHD3	100	96.691	ENSMFAG00000020113	CHD3	100	96.691	Macaca_fascicularis
ENSRBIG00000033562	CHD3	100	95.188	ENSMMUG00000022221	CHD3	100	95.188	Macaca_mulatta
ENSRBIG00000033562	CHD3	100	96.691	ENSMNEG00000001728	CHD3	100	96.691	Macaca_nemestrina
ENSRBIG00000033562	CHD3	100	96.741	ENSMLEG00000032249	CHD3	100	96.741	Mandrillus_leucophaeus
ENSRBIG00000033562	CHD3	92	73.134	ENSMAMG00000000564	chd3	95	80.729	Mastacembelus_armatus
ENSRBIG00000033562	CHD3	99	93.484	ENSMAUG00000013873	Chd3	99	90.846	Mesocricetus_auratus
ENSRBIG00000033562	CHD3	99	95.043	ENSMICG00000008741	CHD3	100	92.368	Microcebus_murinus
ENSRBIG00000033562	CHD3	99	93.912	ENSMOCG00000004848	Chd3	100	94.473	Microtus_ochrogaster
ENSRBIG00000033562	CHD3	98	73.012	ENSMMOG00000012699	chd3	99	72.097	Mola_mola
ENSRBIG00000033562	CHD3	99	89.338	ENSMODG00000007509	CHD3	100	91.452	Monodelphis_domestica
ENSRBIG00000033562	CHD3	99	93.545	MGP_CAROLIEiJ_G0016564	Chd3	100	93.930	Mus_caroli
ENSRBIG00000033562	CHD3	99	93.545	ENSMUSG00000018474	Chd3	99	94.139	Mus_musculus
ENSRBIG00000033562	CHD3	99	93.811	MGP_PahariEiJ_G0017695	Chd3	100	94.241	Mus_pahari
ENSRBIG00000033562	CHD3	99	93.545	MGP_SPRETEiJ_G0017400	Chd3	100	94.139	Mus_spretus
ENSRBIG00000033562	CHD3	94	95.627	ENSMPUG00000008861	CHD3	100	95.627	Mustela_putorius_furo
ENSRBIG00000033562	CHD3	100	94.132	ENSMLUG00000014643	-	100	93.981	Myotis_lucifugus
ENSRBIG00000033562	CHD3	99	94.450	ENSNGAG00000000773	Chd3	99	94.229	Nannospalax_galili
ENSRBIG00000033562	CHD3	87	78.034	ENSNBRG00000000636	chd3	98	73.804	Neolamprologus_brichardi
ENSRBIG00000033562	CHD3	99	92.782	ENSNLEG00000009770	CHD3	100	93.644	Nomascus_leucogenys
ENSRBIG00000033562	CHD3	85	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSRBIG00000033562	CHD3	99	93.046	ENSOPRG00000011069	CHD3	100	93.463	Ochotona_princeps
ENSRBIG00000033562	CHD3	99	94.494	ENSODEG00000017785	CHD3	100	94.494	Octodon_degus
ENSRBIG00000033562	CHD3	98	74.443	ENSONIG00000009292	chd3	100	73.218	Oreochromis_niloticus
ENSRBIG00000033562	CHD3	99	89.753	ENSOCUG00000029299	CHD3	100	90.507	Oryctolagus_cuniculus
ENSRBIG00000033562	CHD3	84	69.086	ENSORLG00000007107	chd3	93	69.492	Oryzias_latipes
ENSRBIG00000033562	CHD3	56	75.875	ENSORLG00020008387	chd3	95	73.982	Oryzias_latipes_hni
ENSRBIG00000033562	CHD3	76	77.279	ENSOMEG00000013691	chd3	99	75.749	Oryzias_melastigma
ENSRBIG00000033562	CHD3	99	94.666	ENSOGAG00000003216	CHD3	100	95.188	Otolemur_garnettii
ENSRBIG00000033562	CHD3	99	92.702	ENSOARG00000017855	CHD3	99	92.604	Ovis_aries
ENSRBIG00000033562	CHD3	100	97.133	ENSPPAG00000032886	CHD3	100	97.133	Pan_paniscus
ENSRBIG00000033562	CHD3	99	94.720	ENSPPRG00000000626	CHD3	99	94.617	Panthera_pardus
ENSRBIG00000033562	CHD3	100	96.494	ENSPTRG00000008714	CHD3	100	96.494	Pan_troglodytes
ENSRBIG00000033562	CHD3	100	96.741	ENSPANG00000023938	CHD3	100	96.741	Papio_anubis
ENSRBIG00000033562	CHD3	97	77.034	ENSPKIG00000006305	chd3	99	77.176	Paramormyrops_kingsleyae
ENSRBIG00000033562	CHD3	59	90.476	ENSPSIG00000010177	CHD3	98	90.659	Pelodiscus_sinensis
ENSRBIG00000033562	CHD3	99	93.725	ENSPEMG00000014262	Chd3	100	93.725	Peromyscus_maniculatus_bairdii
ENSRBIG00000033562	CHD3	99	90.261	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSRBIG00000033562	CHD3	98	72.231	ENSPFOG00000012464	chd3	92	71.804	Poecilia_formosa
ENSRBIG00000033562	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSRBIG00000033562	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.438	Poecilia_mexicana
ENSRBIG00000033562	CHD3	91	84.502	ENSPREG00000011044	chd3	99	76.524	Poecilia_reticulata
ENSRBIG00000033562	CHD3	99	93.096	ENSPPYG00000007940	CHD3	100	91.646	Pongo_abelii
ENSRBIG00000033562	CHD3	96	95.303	ENSPCAG00000004350	CHD3	96	95.303	Procavia_capensis
ENSRBIG00000033562	CHD3	100	95.067	ENSPCOG00000020952	CHD3	100	95.067	Propithecus_coquereli
ENSRBIG00000033562	CHD3	86	95.311	ENSPVAG00000016344	CHD3	87	92.794	Pteropus_vampyrus
ENSRBIG00000033562	CHD3	96	76.628	ENSPNAG00000020393	chd3	98	79.110	Pygocentrus_nattereri
ENSRBIG00000033562	CHD3	99	93.326	ENSRNOG00000009722	Chd3	100	93.337	Rattus_norvegicus
ENSRBIG00000033562	CHD3	100	98.363	ENSRROG00000029554	CHD3	100	98.363	Rhinopithecus_roxellana
ENSRBIG00000033562	CHD3	100	96.160	ENSSBOG00000020719	CHD3	100	96.160	Saimiri_boliviensis_boliviensis
ENSRBIG00000033562	CHD3	98	91.748	ENSSHAG00000014412	CHD3	100	91.902	Sarcophilus_harrisii
ENSRBIG00000033562	CHD3	94	79.476	ENSSFOG00015023123	chd3	98	74.984	Scleropages_formosus
ENSRBIG00000033562	CHD3	86	91.304	ENSSMAG00000006451	chd3	95	80.208	Scophthalmus_maximus
ENSRBIG00000033562	CHD3	54	75.755	ENSSDUG00000005792	chd3	95	73.921	Seriola_dumerili
ENSRBIG00000033562	CHD3	87	81.053	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSRBIG00000033562	CHD3	99	95.043	ENSSSCG00000021363	CHD3	100	94.836	Sus_scrofa
ENSRBIG00000033562	CHD3	78	73.200	ENSTRUG00000014990	chd3	89	73.913	Takifugu_rubripes
ENSRBIG00000033562	CHD3	99	72.313	ENSTNIG00000012998	chd3	99	71.400	Tetraodon_nigroviridis
ENSRBIG00000033562	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSRBIG00000033562	CHD3	98	96.565	ENSTTRG00000010295	CHD3	97	96.565	Tursiops_truncatus
ENSRBIG00000033562	CHD3	99	93.451	ENSUAMG00000005475	CHD3	100	93.451	Ursus_americanus
ENSRBIG00000033562	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSRBIG00000033562	CHD3	99	94.666	ENSVVUG00000028011	CHD3	99	94.900	Vulpes_vulpes
ENSRBIG00000033562	CHD3	99	71.951	ENSXETG00000012991	chd3	92	71.954	Xenopus_tropicalis
ENSRBIG00000033562	CHD3	50	91.429	ENSXCOG00000000809	chd3	98	82.976	Xiphophorus_couchianus
ENSRBIG00000033562	CHD3	85	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus