EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000033806 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 27159 bases
Position: chrMCGX01012793.1:682303-709461
Accession: 108516170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000019642	CAF1	PF04857.20	5.6e-79	1	1
ENSRBIP00000019648	CAF1	PF04857.20	7.3e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000043516	PNLDC1-201	1968	XM_017853502	ENSRBIP00000019642	531 (aa)	XP_017708991	A0A2K6L811
ENSRBIT00000043522	PNLDC1-202	1812	XM_017853503	ENSRBIP00000019648	479 (aa)	XP_017708992	A0A2K6L833

Gene Model

Click here to download ENSRBIG00000033806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000033806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000033806	PNLDC1	99	96.415	ENSG00000146453	PNLDC1	99	96.415	Homo_sapiens
ENSRBIG00000033806	PNLDC1	99	86.767	ENSAMEG00000015371	PNLDC1	99	86.767	Ailuropoda_melanoleuca
ENSRBIG00000033806	PNLDC1	95	58.090	ENSAPLG00000007014	PNLDC1	98	58.090	Anas_platyrhynchos
ENSRBIG00000033806	PNLDC1	99	60.227	ENSACAG00000013667	PNLDC1	99	60.227	Anolis_carolinensis
ENSRBIG00000033806	PNLDC1	100	93.220	ENSANAG00000034713	PNLDC1	100	93.542	Aotus_nancymaae
ENSRBIG00000033806	PNLDC1	95	87.154	ENSBTAG00000015166	PNLDC1	96	87.154	Bos_taurus
ENSRBIG00000033806	PNLDC1	100	92.467	ENSCJAG00000011865	PNLDC1	100	92.467	Callithrix_jacchus
ENSRBIG00000033806	PNLDC1	100	87.947	ENSCAFG00000000740	PNLDC1	100	87.947	Canis_familiaris
ENSRBIG00000033806	PNLDC1	100	85.929	ENSCAFG00020017742	PNLDC1	100	85.929	Canis_lupus_dingo
ENSRBIG00000033806	PNLDC1	100	84.962	ENSCHIG00000003141	PNLDC1	100	84.962	Capra_hircus
ENSRBIG00000033806	PNLDC1	100	89.077	ENSTSYG00000005606	PNLDC1	100	89.077	Carlito_syrichta
ENSRBIG00000033806	PNLDC1	100	65.992	ENSCAPG00000011893	PNLDC1	100	65.992	Cavia_aperea
ENSRBIG00000033806	PNLDC1	100	78.947	ENSCPOG00000019565	PNLDC1	100	78.947	Cavia_porcellus
ENSRBIG00000033806	PNLDC1	100	93.597	ENSCCAG00000026232	PNLDC1	100	93.597	Cebus_capucinus
ENSRBIG00000033806	PNLDC1	100	98.870	ENSCATG00000033196	PNLDC1	100	98.870	Cercocebus_atys
ENSRBIG00000033806	PNLDC1	99	84.659	ENSCLAG00000003228	PNLDC1	99	84.659	Chinchilla_lanigera
ENSRBIG00000033806	PNLDC1	95	97.446	ENSCSAG00000012478	PNLDC1	98	97.446	Chlorocebus_sabaeus
ENSRBIG00000033806	PNLDC1	96	66.016	ENSCPBG00000004050	PNLDC1	100	66.016	Chrysemys_picta_bellii
ENSRBIG00000033806	PNLDC1	95	98.617	ENSCANG00000043076	PNLDC1	97	98.617	Colobus_angolensis_palliatus
ENSRBIG00000033806	PNLDC1	100	81.356	ENSCGRG00001007470	-	99	81.356	Cricetulus_griseus_chok1gshd
ENSRBIG00000033806	PNLDC1	100	65.913	ENSCGRG00001011981	-	99	65.913	Cricetulus_griseus_chok1gshd
ENSRBIG00000033806	PNLDC1	100	67.985	ENSCGRG00000003103	-	99	67.985	Cricetulus_griseus_crigri
ENSRBIG00000033806	PNLDC1	100	81.356	ENSCGRG00000010221	-	99	81.356	Cricetulus_griseus_crigri
ENSRBIG00000033806	PNLDC1	100	85.714	ENSDNOG00000013709	PNLDC1	100	85.714	Dasypus_novemcinctus
ENSRBIG00000033806	PNLDC1	100	80.337	ENSDORG00000011517	Pnldc1	99	87.220	Dipodomys_ordii
ENSRBIG00000033806	PNLDC1	93	74.494	ENSETEG00000007587	PNLDC1	99	74.494	Echinops_telfairi
ENSRBIG00000033806	PNLDC1	100	79.963	ENSEASG00005019029	PNLDC1	100	79.963	Equus_asinus_asinus
ENSRBIG00000033806	PNLDC1	100	88.701	ENSECAG00000012898	PNLDC1	100	88.701	Equus_caballus
ENSRBIG00000033806	PNLDC1	67	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSRBIG00000033806	PNLDC1	100	88.136	ENSFCAG00000002848	PNLDC1	100	88.136	Felis_catus
ENSRBIG00000033806	PNLDC1	94	56.660	ENSFALG00000012081	PNLDC1	99	56.660	Ficedula_albicollis
ENSRBIG00000033806	PNLDC1	100	84.746	ENSFDAG00000021334	PNLDC1	100	84.746	Fukomys_damarensis
ENSRBIG00000033806	PNLDC1	79	58.432	ENSGALG00000011624	PNLDC1	82	58.432	Gallus_gallus
ENSRBIG00000033806	PNLDC1	99	66.667	ENSGAGG00000015276	PNLDC1	100	67.769	Gopherus_agassizii
ENSRBIG00000033806	PNLDC1	100	96.234	ENSGGOG00000014077	PNLDC1	100	96.234	Gorilla_gorilla
ENSRBIG00000033806	PNLDC1	100	85.122	ENSHGLG00000006889	PNLDC1	100	85.122	Heterocephalus_glaber_female
ENSRBIG00000033806	PNLDC1	100	85.122	ENSHGLG00100018275	PNLDC1	100	85.122	Heterocephalus_glaber_male
ENSRBIG00000033806	PNLDC1	99	88.447	ENSSTOG00000005595	PNLDC1	99	88.447	Ictidomys_tridecemlineatus
ENSRBIG00000033806	PNLDC1	99	80.151	ENSJJAG00000009937	Pnldc1	99	80.151	Jaculus_jaculus
ENSRBIG00000033806	PNLDC1	59	85.397	ENSLAFG00000030189	PNLDC1	92	85.397	Loxodonta_africana
ENSRBIG00000033806	PNLDC1	100	98.870	ENSMFAG00000041296	PNLDC1	100	98.870	Macaca_fascicularis
ENSRBIG00000033806	PNLDC1	100	98.870	ENSMMUG00000004181	PNLDC1	100	98.870	Macaca_mulatta
ENSRBIG00000033806	PNLDC1	100	98.682	ENSMNEG00000034271	PNLDC1	100	98.682	Macaca_nemestrina
ENSRBIG00000033806	PNLDC1	100	95.104	ENSMLEG00000044059	PNLDC1	100	95.104	Mandrillus_leucophaeus
ENSRBIG00000033806	PNLDC1	95	57.905	ENSMGAG00000012470	PNLDC1	97	57.905	Meleagris_gallopavo
ENSRBIG00000033806	PNLDC1	99	66.917	ENSMAUG00000012298	Pnldc1	100	66.917	Mesocricetus_auratus
ENSRBIG00000033806	PNLDC1	100	87.759	ENSMICG00000008021	PNLDC1	100	87.759	Microcebus_murinus
ENSRBIG00000033806	PNLDC1	100	85.929	ENSMOCG00000014287	Pnldc1	100	85.929	Microtus_ochrogaster
ENSRBIG00000033806	PNLDC1	99	75.142	ENSMODG00000007420	PNLDC1	99	75.142	Monodelphis_domestica
ENSRBIG00000033806	PNLDC1	100	85.687	MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.687	Mus_caroli
ENSRBIG00000033806	PNLDC1	100	86.064	ENSMUSG00000073460	Pnldc1	100	89.524	Mus_musculus
ENSRBIG00000033806	PNLDC1	100	85.876	MGP_PahariEiJ_G0023361	Pnldc1	100	85.876	Mus_pahari
ENSRBIG00000033806	PNLDC1	100	85.876	MGP_SPRETEiJ_G0021975	Pnldc1	100	85.876	Mus_spretus
ENSRBIG00000033806	PNLDC1	99	86.415	ENSMPUG00000004920	PNLDC1	99	86.415	Mustela_putorius_furo
ENSRBIG00000033806	PNLDC1	100	87.194	ENSMLUG00000000747	PNLDC1	100	87.194	Myotis_lucifugus
ENSRBIG00000033806	PNLDC1	100	87.006	ENSNGAG00000017714	Pnldc1	99	87.006	Nannospalax_galili
ENSRBIG00000033806	PNLDC1	95	94.477	ENSNLEG00000011282	PNLDC1	98	94.477	Nomascus_leucogenys
ENSRBIG00000033806	PNLDC1	60	62.813	ENSMEUG00000011926	-	64	62.813	Notamacropus_eugenii
ENSRBIG00000033806	PNLDC1	54	67.014	ENSMEUG00000014042	-	100	67.014	Notamacropus_eugenii
ENSRBIG00000033806	PNLDC1	79	85.904	ENSOPRG00000003813	PNLDC1	79	85.904	Ochotona_princeps
ENSRBIG00000033806	PNLDC1	100	83.992	ENSODEG00000008047	PNLDC1	100	83.992	Octodon_degus
ENSRBIG00000033806	PNLDC1	99	57.656	ENSOANG00000012199	PNLDC1	99	59.924	Ornithorhynchus_anatinus
ENSRBIG00000033806	PNLDC1	100	87.006	ENSOCUG00000013867	PNLDC1	100	87.006	Oryctolagus_cuniculus
ENSRBIG00000033806	PNLDC1	99	88.826	ENSOGAG00000007331	PNLDC1	99	88.826	Otolemur_garnettii
ENSRBIG00000033806	PNLDC1	100	84.934	ENSOARG00000004585	PNLDC1	100	84.934	Ovis_aries
ENSRBIG00000033806	PNLDC1	100	95.480	ENSPPAG00000026651	PNLDC1	100	95.480	Pan_paniscus
ENSRBIG00000033806	PNLDC1	100	88.136	ENSPPRG00000012854	PNLDC1	100	88.136	Panthera_pardus
ENSRBIG00000033806	PNLDC1	99	83.333	ENSPTIG00000011501	PNLDC1	99	83.333	Panthera_tigris_altaica
ENSRBIG00000033806	PNLDC1	100	95.480	ENSPTRG00000018762	PNLDC1	100	95.480	Pan_troglodytes
ENSRBIG00000033806	PNLDC1	100	99.058	ENSPANG00000022009	PNLDC1	100	99.058	Papio_anubis
ENSRBIG00000033806	PNLDC1	61	56.000	ENSPSIG00000011419	PNLDC1	99	56.000	Pelodiscus_sinensis
ENSRBIG00000033806	PNLDC1	100	86.252	ENSPEMG00000016301	Pnldc1	99	86.252	Peromyscus_maniculatus_bairdii
ENSRBIG00000033806	PNLDC1	86	30.000	ENSPMAG00000003956	parn	90	30.204	Petromyzon_marinus
ENSRBIG00000033806	PNLDC1	83	76.082	ENSPCIG00000023412	PNLDC1	100	76.082	Phascolarctos_cinereus
ENSRBIG00000033806	PNLDC1	100	88.346	ENSPPYG00000017148	PNLDC1	100	88.346	Pongo_abelii
ENSRBIG00000033806	PNLDC1	99	75.283	ENSPCAG00000014169	PNLDC1	99	75.283	Procavia_capensis
ENSRBIG00000033806	PNLDC1	100	87.947	ENSPCOG00000025722	PNLDC1	100	87.947	Propithecus_coquereli
ENSRBIG00000033806	PNLDC1	73	90.649	ENSPVAG00000005325	PNLDC1	73	90.649	Pteropus_vampyrus
ENSRBIG00000033806	PNLDC1	100	85.687	ENSRNOG00000023140	Pnldc1	100	86.875	Rattus_norvegicus
ENSRBIG00000033806	PNLDC1	95	99.605	ENSRROG00000043919	PNLDC1	97	99.605	Rhinopithecus_roxellana
ENSRBIG00000033806	PNLDC1	100	93.597	ENSSBOG00000019135	PNLDC1	100	93.597	Saimiri_boliviensis_boliviensis
ENSRBIG00000033806	PNLDC1	95	76.938	ENSSHAG00000015192	PNLDC1	96	76.938	Sarcophilus_harrisii
ENSRBIG00000033806	PNLDC1	54	66.090	ENSSPUG00000004627	PNLDC1	99	66.518	Sphenodon_punctatus
ENSRBIG00000033806	PNLDC1	96	85.098	ENSSSCG00000004046	PNLDC1	99	85.098	Sus_scrofa
ENSRBIG00000033806	PNLDC1	91	57.732	ENSTGUG00000011418	PNLDC1	99	57.732	Taeniopygia_guttata
ENSRBIG00000033806	PNLDC1	96	77.451	ENSTBEG00000009131	PNLDC1	98	77.451	Tupaia_belangeri
ENSRBIG00000033806	PNLDC1	73	83.161	ENSTTRG00000010409	PNLDC1	73	83.161	Tursiops_truncatus
ENSRBIG00000033806	PNLDC1	99	74.815	ENSUAMG00000015783	PNLDC1	99	74.815	Ursus_americanus
ENSRBIG00000033806	PNLDC1	95	80.000	ENSUMAG00000011903	PNLDC1	99	80.000	Ursus_maritimus
ENSRBIG00000033806	PNLDC1	96	88.650	ENSVVUG00000006586	PNLDC1	99	88.090	Vulpes_vulpes