EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000033886 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: CPSF30|NAR
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 12840 bases
Position: chrMCGX01005405.1:1473170-1486009
Accession: 108538143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000019795	zf-CCCH	PF00642.24	2e-20	1	2
ENSRBIP00000019795	zf-CCCH	PF00642.24	2e-20	2	2
ENSRBIP00000019796	zf-CCCH	PF00642.24	7.4e-16	1	2
ENSRBIP00000019796	zf-CCCH	PF00642.24	7.4e-16	2	2
ENSRBIP00000019796	zf-CCHC	PF00098.23	3.7e-06	1	1
ENSRBIP00000019795	zf-CCHC	PF00098.23	5.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000043673	CPSF4-202	531	-	ENSRBIP00000019796	176 (aa)	-	A0A2K6L8E6
ENSRBIT00000043672	CPSF4-201	1607	XM_017886014	ENSRBIP00000019795	234 (aa)	XP_017741503	A0A2K6L8D0

Gene Model

Click here to download ENSRBIG00000033886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000033886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000033886	CPSF4	56	71.756	ENSRBIG00000029048	CPSF4L	77	71.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000033886	CPSF4	100	100.000	ENSG00000160917	CPSF4	100	100.000	Homo_sapiens
ENSRBIG00000033886	CPSF4	77	74.176	ENSAPOG00000004921	cpsf4	100	74.176	Acanthochromis_polyacanthus
ENSRBIG00000033886	CPSF4	100	99.145	ENSAMEG00000006252	CPSF4	87	99.145	Ailuropoda_melanoleuca
ENSRBIG00000033886	CPSF4	100	77.778	ENSACIG00000009248	cpsf4	85	75.214	Amphilophus_citrinellus
ENSRBIG00000033886	CPSF4	100	84.255	ENSAOCG00000019616	cpsf4	87	84.255	Amphiprion_ocellaris
ENSRBIG00000033886	CPSF4	100	84.255	ENSAPEG00000011679	cpsf4	87	84.255	Amphiprion_percula
ENSRBIG00000033886	CPSF4	100	83.122	ENSATEG00000007010	cpsf4	87	83.122	Anabas_testudineus
ENSRBIG00000033886	CPSF4	100	94.444	ENSACAG00000012941	CPSF4	77	94.444	Anolis_carolinensis
ENSRBIG00000033886	CPSF4	100	100.000	ENSANAG00000021360	CPSF4	87	100.000	Aotus_nancymaae
ENSRBIG00000033886	CPSF4	100	83.404	ENSACLG00000010374	cpsf4	87	83.404	Astatotilapia_calliptera
ENSRBIG00000033886	CPSF4	100	84.659	ENSAMXG00000031647	cpsf4	87	85.169	Astyanax_mexicanus
ENSRBIG00000033886	CPSF4	100	88.034	ENSBTAG00000002090	CPSF4	86	88.034	Bos_taurus
ENSRBIG00000033886	CPSF4	100	100.000	ENSCJAG00000015826	CPSF4	87	100.000	Callithrix_jacchus
ENSRBIG00000033886	CPSF4	100	98.718	ENSCAFG00000015036	CPSF4	87	98.718	Canis_familiaris
ENSRBIG00000033886	CPSF4	93	98.624	ENSCAFG00020014462	CPSF4	83	98.624	Canis_lupus_dingo
ENSRBIG00000033886	CPSF4	100	99.145	ENSCHIG00000014313	CPSF4	87	99.145	Capra_hircus
ENSRBIG00000033886	CPSF4	100	99.432	ENSTSYG00000005712	-	83	99.432	Carlito_syrichta
ENSRBIG00000033886	CPSF4	100	88.764	ENSTSYG00000014604	-	83	88.764	Carlito_syrichta
ENSRBIG00000033886	CPSF4	100	89.326	ENSTSYG00000008195	-	98	89.326	Carlito_syrichta
ENSRBIG00000033886	CPSF4	93	99.083	ENSCAPG00000013881	CPSF4	87	99.083	Cavia_aperea
ENSRBIG00000033886	CPSF4	100	98.864	ENSCPOG00000001783	CPSF4	83	98.864	Cavia_porcellus
ENSRBIG00000033886	CPSF4	100	100.000	ENSCCAG00000028291	CPSF4	87	100.000	Cebus_capucinus
ENSRBIG00000033886	CPSF4	100	100.000	ENSCATG00000038440	CPSF4	87	100.000	Cercocebus_atys
ENSRBIG00000033886	CPSF4	100	99.145	ENSCLAG00000007050	CPSF4	87	99.145	Chinchilla_lanigera
ENSRBIG00000033886	CPSF4	100	100.000	ENSCSAG00000017795	CPSF4	87	100.000	Chlorocebus_sabaeus
ENSRBIG00000033886	CPSF4	56	85.385	ENSCPBG00000010269	-	79	84.733	Chrysemys_picta_bellii
ENSRBIG00000033886	CPSF4	92	95.833	ENSCPBG00000020869	CPSF4	100	95.833	Chrysemys_picta_bellii
ENSRBIG00000033886	CPSF4	96	53.540	ENSCING00000021080	-	84	53.540	Ciona_intestinalis
ENSRBIG00000033886	CPSF4	96	51.210	ENSCSAVG00000011469	-	85	50.607	Ciona_savignyi
ENSRBIG00000033886	CPSF4	100	100.000	ENSCANG00000019384	CPSF4	87	100.000	Colobus_angolensis_palliatus
ENSRBIG00000033886	CPSF4	100	98.864	ENSCGRG00001024184	Cpsf4	83	98.864	Cricetulus_griseus_chok1gshd
ENSRBIG00000033886	CPSF4	100	99.145	ENSCGRG00000013892	Cpsf4	87	99.145	Cricetulus_griseus_crigri
ENSRBIG00000033886	CPSF4	100	84.091	ENSCSEG00000019055	cpsf4	87	83.404	Cynoglossus_semilaevis
ENSRBIG00000033886	CPSF4	100	82.553	ENSCVAG00000016528	cpsf4	87	82.553	Cyprinodon_variegatus
ENSRBIG00000033886	CPSF4	100	83.898	ENSDARG00000020217	cpsf4	87	83.898	Danio_rerio
ENSRBIG00000033886	CPSF4	100	99.573	ENSDNOG00000006344	CPSF4	87	99.573	Dasypus_novemcinctus
ENSRBIG00000033886	CPSF4	93	98.618	ENSDORG00000000742	Cpsf4	100	98.618	Dipodomys_ordii
ENSRBIG00000033886	CPSF4	100	55.642	FBgn0015621	Clp	87	55.253	Drosophila_melanogaster
ENSRBIG00000033886	CPSF4	68	100.000	ENSETEG00000002608	CPSF4	57	100.000	Echinops_telfairi
ENSRBIG00000033886	CPSF4	99	65.517	ENSEBUG00000012552	cpsf4	84	65.517	Eptatretus_burgeri
ENSRBIG00000033886	CPSF4	100	88.462	ENSEASG00005002487	CPSF4	86	88.462	Equus_asinus_asinus
ENSRBIG00000033886	CPSF4	100	99.145	ENSECAG00000007525	CPSF4	87	99.145	Equus_caballus
ENSRBIG00000033886	CPSF4	82	100.000	ENSEEUG00000002158	CPSF4	73	100.000	Erinaceus_europaeus
ENSRBIG00000033886	CPSF4	100	81.590	ENSELUG00000011481	cpsf4	87	81.590	Esox_lucius
ENSRBIG00000033886	CPSF4	100	99.145	ENSFCAG00000015070	CPSF4	87	99.145	Felis_catus
ENSRBIG00000033886	CPSF4	100	85.470	ENSFALG00000013799	CPSF4	86	85.470	Ficedula_albicollis
ENSRBIG00000033886	CPSF4	100	99.145	ENSFDAG00000014092	CPSF4	96	99.145	Fukomys_damarensis
ENSRBIG00000033886	CPSF4	100	81.702	ENSFHEG00000010880	cpsf4	87	81.702	Fundulus_heteroclitus
ENSRBIG00000033886	CPSF4	100	75.847	ENSGMOG00000002330	cpsf4	86	74.153	Gadus_morhua
ENSRBIG00000033886	CPSF4	100	85.043	ENSGALG00000004714	CPSF4	86	85.043	Gallus_gallus
ENSRBIG00000033886	CPSF4	78	38.947	ENSGALG00000004441	-	92	37.895	Gallus_gallus
ENSRBIG00000033886	CPSF4	100	81.277	ENSGAFG00000010580	cpsf4	87	81.277	Gambusia_affinis
ENSRBIG00000033886	CPSF4	100	76.695	ENSGACG00000007792	cpsf4	86	75.847	Gasterosteus_aculeatus
ENSRBIG00000033886	CPSF4	56	85.385	ENSGAGG00000020579	-	73	85.385	Gopherus_agassizii
ENSRBIG00000033886	CPSF4	100	95.726	ENSGAGG00000021835	CPSF4	87	95.726	Gopherus_agassizii
ENSRBIG00000033886	CPSF4	100	100.000	ENSGGOG00000015131	CPSF4	87	100.000	Gorilla_gorilla
ENSRBIG00000033886	CPSF4	100	83.404	ENSHBUG00000013699	cpsf4	87	83.404	Haplochromis_burtoni
ENSRBIG00000033886	CPSF4	100	98.295	ENSHGLG00000017150	CPSF4	87	97.034	Heterocephalus_glaber_female
ENSRBIG00000033886	CPSF4	100	66.477	ENSHGLG00100017302	-	79	64.205	Heterocephalus_glaber_male
ENSRBIG00000033886	CPSF4	100	96.023	ENSHGLG00100009215	-	100	96.023	Heterocephalus_glaber_male
ENSRBIG00000033886	CPSF4	100	79.574	ENSHCOG00000004397	cpsf4	87	79.574	Hippocampus_comes
ENSRBIG00000033886	CPSF4	100	83.051	ENSIPUG00000017147	cpsf4	87	84.388	Ictalurus_punctatus
ENSRBIG00000033886	CPSF4	100	99.145	ENSSTOG00000001688	CPSF4	87	99.145	Ictidomys_tridecemlineatus
ENSRBIG00000033886	CPSF4	100	99.145	ENSJJAG00000019426	Cpsf4	87	99.145	Jaculus_jaculus
ENSRBIG00000033886	CPSF4	100	81.277	ENSKMAG00000015642	cpsf4	87	81.277	Kryptolebias_marmoratus
ENSRBIG00000033886	CPSF4	100	88.936	ENSLACG00000010938	CPSF4	87	88.936	Latimeria_chalumnae
ENSRBIG00000033886	CPSF4	100	59.574	ENSLACG00000018470	-	86	59.574	Latimeria_chalumnae
ENSRBIG00000033886	CPSF4	100	88.462	ENSLOCG00000004814	cpsf4	87	88.462	Lepisosteus_oculatus
ENSRBIG00000033886	CPSF4	100	98.718	ENSLAFG00000000159	CPSF4	100	97.516	Loxodonta_africana
ENSRBIG00000033886	CPSF4	100	100.000	ENSMFAG00000001462	CPSF4	100	88.426	Macaca_fascicularis
ENSRBIG00000033886	CPSF4	100	100.000	ENSMMUG00000019191	CPSF4	87	100.000	Macaca_mulatta
ENSRBIG00000033886	CPSF4	100	100.000	ENSMNEG00000032306	CPSF4	87	100.000	Macaca_nemestrina
ENSRBIG00000033886	CPSF4	100	100.000	ENSMLEG00000034721	CPSF4	87	100.000	Mandrillus_leucophaeus
ENSRBIG00000033886	CPSF4	100	82.979	ENSMAMG00000006244	cpsf4	87	82.979	Mastacembelus_armatus
ENSRBIG00000033886	CPSF4	100	83.404	ENSMZEG00005007515	cpsf4	87	83.404	Maylandia_zebra
ENSRBIG00000033886	CPSF4	100	85.043	ENSMGAG00000004235	CPSF4	99	85.043	Meleagris_gallopavo
ENSRBIG00000033886	CPSF4	100	99.145	ENSMAUG00000021253	Cpsf4	87	99.145	Mesocricetus_auratus
ENSRBIG00000033886	CPSF4	100	99.573	ENSMICG00000017429	CPSF4	87	99.573	Microcebus_murinus
ENSRBIG00000033886	CPSF4	100	99.145	ENSMOCG00000014901	Cpsf4	87	99.145	Microtus_ochrogaster
ENSRBIG00000033886	CPSF4	100	85.227	ENSMMOG00000001813	cpsf4	87	83.404	Mola_mola
ENSRBIG00000033886	CPSF4	100	97.863	ENSMODG00000001367	CPSF4	87	97.863	Monodelphis_domestica
ENSRBIG00000033886	CPSF4	100	81.702	ENSMALG00000012611	cpsf4	87	81.702	Monopterus_albus
ENSRBIG00000033886	CPSF4	100	99.145	MGP_CAROLIEiJ_G0028012	Cpsf4	87	99.145	Mus_caroli
ENSRBIG00000033886	CPSF4	100	99.145	ENSMUSG00000029625	Cpsf4	87	99.145	Mus_musculus
ENSRBIG00000033886	CPSF4	100	99.145	MGP_PahariEiJ_G0024581	Cpsf4	87	99.145	Mus_pahari
ENSRBIG00000033886	CPSF4	100	99.573	MGP_SPRETEiJ_G0029013	Cpsf4	87	99.573	Mus_spretus
ENSRBIG00000033886	CPSF4	100	99.145	ENSMPUG00000016508	CPSF4	87	99.145	Mustela_putorius_furo
ENSRBIG00000033886	CPSF4	100	88.034	ENSMLUG00000010980	CPSF4	99	88.034	Myotis_lucifugus
ENSRBIG00000033886	CPSF4	100	98.718	ENSNGAG00000001567	Cpsf4	87	98.718	Nannospalax_galili
ENSRBIG00000033886	CPSF4	100	83.404	ENSNBRG00000003943	cpsf4	93	83.404	Neolamprologus_brichardi
ENSRBIG00000033886	CPSF4	100	100.000	ENSNLEG00000011074	CPSF4	87	96.581	Nomascus_leucogenys
ENSRBIG00000033886	CPSF4	100	97.863	ENSMEUG00000006955	CPSF4	87	97.863	Notamacropus_eugenii
ENSRBIG00000033886	CPSF4	100	99.145	ENSOPRG00000013663	CPSF4	87	99.145	Ochotona_princeps
ENSRBIG00000033886	CPSF4	100	72.689	ENSODEG00000009779	-	87	72.689	Octodon_degus
ENSRBIG00000033886	CPSF4	100	99.145	ENSODEG00000011181	-	87	99.145	Octodon_degus
ENSRBIG00000033886	CPSF4	91	83.735	ENSODEG00000018283	-	75	83.735	Octodon_degus
ENSRBIG00000033886	CPSF4	100	83.404	ENSONIG00000008495	cpsf4	87	83.404	Oreochromis_niloticus
ENSRBIG00000033886	CPSF4	100	96.581	ENSOANG00000007729	CPSF4	99	96.581	Ornithorhynchus_anatinus
ENSRBIG00000033886	CPSF4	93	55.310	ENSOANG00000009568	-	83	53.540	Ornithorhynchus_anatinus
ENSRBIG00000033886	CPSF4	100	98.718	ENSOCUG00000002437	CPSF4	61	98.718	Oryctolagus_cuniculus
ENSRBIG00000033886	CPSF4	100	82.051	ENSORLG00000022798	cpsf4	87	82.051	Oryzias_latipes
ENSRBIG00000033886	CPSF4	100	82.051	ENSORLG00020008548	cpsf4	87	82.051	Oryzias_latipes_hni
ENSRBIG00000033886	CPSF4	100	82.051	ENSORLG00015019575	cpsf4	87	82.051	Oryzias_latipes_hsok
ENSRBIG00000033886	CPSF4	100	82.955	ENSOMEG00000005176	cpsf4	87	80.769	Oryzias_melastigma
ENSRBIG00000033886	CPSF4	100	99.573	ENSOGAG00000010884	CPSF4	87	99.573	Otolemur_garnettii
ENSRBIG00000033886	CPSF4	100	86.555	ENSOARG00000018668	CPSF4	87	86.134	Ovis_aries
ENSRBIG00000033886	CPSF4	100	99.573	ENSPPAG00000043355	CPSF4	87	99.573	Pan_paniscus
ENSRBIG00000033886	CPSF4	100	99.145	ENSPPRG00000003134	CPSF4	87	99.145	Panthera_pardus
ENSRBIG00000033886	CPSF4	100	99.145	ENSPTIG00000005604	CPSF4	87	99.145	Panthera_tigris_altaica
ENSRBIG00000033886	CPSF4	100	99.573	ENSPTRG00000019453	CPSF4	87	99.573	Pan_troglodytes
ENSRBIG00000033886	CPSF4	100	100.000	ENSPANG00000023123	CPSF4	87	100.000	Papio_anubis
ENSRBIG00000033886	CPSF4	100	83.682	ENSPKIG00000014278	cpsf4	87	83.682	Paramormyrops_kingsleyae
ENSRBIG00000033886	CPSF4	93	58.904	ENSPSIG00000018198	-	100	57.798	Pelodiscus_sinensis
ENSRBIG00000033886	CPSF4	92	95.370	ENSPSIG00000011229	CPSF4	100	95.370	Pelodiscus_sinensis
ENSRBIG00000033886	CPSF4	93	76.147	ENSPMGG00000017735	cpsf4	81	74.771	Periophthalmus_magnuspinnatus
ENSRBIG00000033886	CPSF4	100	99.145	ENSPEMG00000004508	Cpsf4	87	99.145	Peromyscus_maniculatus_bairdii
ENSRBIG00000033886	CPSF4	100	97.863	ENSPCIG00000024776	CPSF4	87	97.863	Phascolarctos_cinereus
ENSRBIG00000033886	CPSF4	100	81.277	ENSPFOG00000014912	cpsf4	87	81.277	Poecilia_formosa
ENSRBIG00000033886	CPSF4	100	73.077	ENSPLAG00000009599	cpsf4	86	73.077	Poecilia_latipinna
ENSRBIG00000033886	CPSF4	100	81.277	ENSPMEG00000009790	cpsf4	87	81.277	Poecilia_mexicana
ENSRBIG00000033886	CPSF4	100	80.426	ENSPREG00000018166	cpsf4	87	77.778	Poecilia_reticulata
ENSRBIG00000033886	CPSF4	100	99.145	ENSPPYG00000017378	CPSF4	100	99.145	Pongo_abelii
ENSRBIG00000033886	CPSF4	100	98.291	ENSPCAG00000001892	CPSF4	87	98.291	Procavia_capensis
ENSRBIG00000033886	CPSF4	100	99.145	ENSPCOG00000012771	CPSF4	87	99.145	Propithecus_coquereli
ENSRBIG00000033886	CPSF4	93	99.078	ENSPVAG00000007531	CPSF4	81	99.078	Pteropus_vampyrus
ENSRBIG00000033886	CPSF4	100	83.404	ENSPNYG00000018559	cpsf4	87	83.404	Pundamilia_nyererei
ENSRBIG00000033886	CPSF4	100	84.746	ENSPNAG00000003736	cpsf4	87	85.593	Pygocentrus_nattereri
ENSRBIG00000033886	CPSF4	100	98.864	ENSRNOG00000000985	Cpsf4	83	98.864	Rattus_norvegicus
ENSRBIG00000033886	CPSF4	100	100.000	ENSRROG00000040431	CPSF4	83	100.000	Rhinopithecus_roxellana
ENSRBIG00000033886	CPSF4	100	100.000	ENSSBOG00000020493	CPSF4	100	88.426	Saimiri_boliviensis_boliviensis
ENSRBIG00000033886	CPSF4	100	97.863	ENSSHAG00000011533	CPSF4	87	97.863	Sarcophilus_harrisii
ENSRBIG00000033886	CPSF4	100	84.232	ENSSFOG00015007883	cpsf4	87	85.062	Scleropages_formosus
ENSRBIG00000033886	CPSF4	100	78.205	ENSSMAG00000006374	cpsf4	86	76.068	Scophthalmus_maximus
ENSRBIG00000033886	CPSF4	100	82.553	ENSSDUG00000018887	cpsf4	87	82.553	Seriola_dumerili
ENSRBIG00000033886	CPSF4	100	83.404	ENSSLDG00000019078	cpsf4	87	83.404	Seriola_lalandi_dorsalis
ENSRBIG00000033886	CPSF4	100	99.573	ENSSARG00000012416	CPSF4	100	99.573	Sorex_araneus
ENSRBIG00000033886	CPSF4	100	94.872	ENSSPUG00000003549	CPSF4	87	94.872	Sphenodon_punctatus
ENSRBIG00000033886	CPSF4	95	58.667	ENSSPUG00000014803	-	81	58.744	Sphenodon_punctatus
ENSRBIG00000033886	CPSF4	100	77.778	ENSSPAG00000006174	cpsf4	85	75.214	Stegastes_partitus
ENSRBIG00000033886	CPSF4	100	88.889	ENSSSCG00000026896	CPSF4	86	88.889	Sus_scrofa
ENSRBIG00000033886	CPSF4	100	84.322	ENSTGUG00000007552	CPSF4	86	82.627	Taeniopygia_guttata
ENSRBIG00000033886	CPSF4	100	80.000	ENSTRUG00000024220	cpsf4	87	80.000	Takifugu_rubripes
ENSRBIG00000033886	CPSF4	100	78.723	ENSTNIG00000006265	cpsf4	87	80.426	Tetraodon_nigroviridis
ENSRBIG00000033886	CPSF4	100	90.171	ENSTBEG00000011406	CPSF4	100	90.171	Tupaia_belangeri
ENSRBIG00000033886	CPSF4	100	75.641	ENSTTRG00000003007	CPSF4	87	75.641	Tursiops_truncatus
ENSRBIG00000033886	CPSF4	91	86.792	ENSUAMG00000008051	CPSF4	72	86.792	Ursus_americanus
ENSRBIG00000033886	CPSF4	100	88.034	ENSUMAG00000009474	CPSF4	86	88.034	Ursus_maritimus
ENSRBIG00000033886	CPSF4	100	88.034	ENSVVUG00000008824	CPSF4	86	88.034	Vulpes_vulpes
ENSRBIG00000033886	CPSF4	99	60.944	ENSXETG00000004641	cpsf4l	86	60.944	Xenopus_tropicalis
ENSRBIG00000033886	CPSF4	100	88.115	ENSXETG00000009892	cpsf4	87	88.115	Xenopus_tropicalis
ENSRBIG00000033886	CPSF4	100	82.955	ENSXCOG00000016040	cpsf4	87	80.851	Xiphophorus_couchianus
ENSRBIG00000033886	CPSF4	100	81.277	ENSXMAG00000024670	cpsf4	87	81.277	Xiphophorus_maculatus