EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000034842 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 9485 bases
Position: chrMCGX01007742.1:813102-822586
Accession: 108542310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000021784	PseudoU_synth_2	PF00849.22	3.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000045670	RPUSD4-201	2469	XM_017892256	ENSRBIP00000021784	377 (aa)	XP_017747745	A0A2K6LE22

Gene Model

Click here to download ENSRBIG00000034842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000034842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000034842	RPUSD4	72	30.104	ENSRBIG00000041230	RPUSD3	79	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000034842	RPUSD4	100	91.512	ENSG00000165526	RPUSD4	100	91.512	Homo_sapiens
ENSRBIG00000034842	RPUSD4	91	48.588	ENSAPOG00000011024	rpusd4	87	49.425	Acanthochromis_polyacanthus
ENSRBIG00000034842	RPUSD4	100	81.698	ENSAMEG00000000127	-	100	81.698	Ailuropoda_melanoleuca
ENSRBIG00000034842	RPUSD4	62	82.258	ENSAMEG00000005953	-	100	82.927	Ailuropoda_melanoleuca
ENSRBIG00000034842	RPUSD4	86	48.024	ENSACIG00000003533	rpusd4	94	48.457	Amphilophus_citrinellus
ENSRBIG00000034842	RPUSD4	90	48.864	ENSAOCG00000015409	rpusd4	86	49.280	Amphiprion_ocellaris
ENSRBIG00000034842	RPUSD4	90	49.148	ENSAPEG00000018935	rpusd4	86	49.568	Amphiprion_percula
ENSRBIG00000034842	RPUSD4	85	49.235	ENSATEG00000008059	rpusd4	82	48.949	Anabas_testudineus
ENSRBIG00000034842	RPUSD4	73	61.649	ENSAPLG00000013250	RPUSD4	99	60.000	Anas_platyrhynchos
ENSRBIG00000034842	RPUSD4	97	60.598	ENSACAG00000000189	RPUSD4	99	61.264	Anolis_carolinensis
ENSRBIG00000034842	RPUSD4	99	89.247	ENSANAG00000024050	RPUSD4	97	90.305	Aotus_nancymaae
ENSRBIG00000034842	RPUSD4	89	49.558	ENSACLG00000020996	rpusd4	85	50.000	Astatotilapia_calliptera
ENSRBIG00000034842	RPUSD4	90	48.851	ENSAMXG00000031479	rpusd4	94	49.555	Astyanax_mexicanus
ENSRBIG00000034842	RPUSD4	100	77.513	ENSBTAG00000020900	RPUSD4	100	77.513	Bos_taurus
ENSRBIG00000034842	RPUSD4	98	89.189	ENSCJAG00000042850	RPUSD4	91	90.028	Callithrix_jacchus
ENSRBIG00000034842	RPUSD4	100	79.630	ENSCAFG00000010488	RPUSD4	96	81.215	Canis_familiaris
ENSRBIG00000034842	RPUSD4	100	79.630	ENSCAFG00020010621	RPUSD4	96	81.215	Canis_lupus_dingo
ENSRBIG00000034842	RPUSD4	100	77.573	ENSCHIG00000009975	RPUSD4	100	77.573	Capra_hircus
ENSRBIG00000034842	RPUSD4	100	86.207	ENSTSYG00000008456	RPUSD4	100	86.207	Carlito_syrichta
ENSRBIG00000034842	RPUSD4	68	79.845	ENSCAPG00000006040	RPUSD4	94	82.231	Cavia_aperea
ENSRBIG00000034842	RPUSD4	100	79.841	ENSCPOG00000014971	RPUSD4	96	81.440	Cavia_porcellus
ENSRBIG00000034842	RPUSD4	98	89.488	ENSCCAG00000027838	RPUSD4	97	90.028	Cebus_capucinus
ENSRBIG00000034842	RPUSD4	100	96.817	ENSCATG00000041570	RPUSD4	100	96.817	Cercocebus_atys
ENSRBIG00000034842	RPUSD4	100	83.554	ENSCLAG00000016553	RPUSD4	100	83.554	Chinchilla_lanigera
ENSRBIG00000034842	RPUSD4	100	96.021	ENSCSAG00000002274	RPUSD4	100	96.021	Chlorocebus_sabaeus
ENSRBIG00000034842	RPUSD4	75	83.746	ENSCHOG00000010249	RPUSD4	100	83.746	Choloepus_hoffmanni
ENSRBIG00000034842	RPUSD4	75	68.531	ENSCPBG00000011175	RPUSD4	98	68.772	Chrysemys_picta_bellii
ENSRBIG00000034842	RPUSD4	71	43.525	ENSCSAVG00000000872	-	54	43.525	Ciona_savignyi
ENSRBIG00000034842	RPUSD4	100	97.878	ENSCANG00000039684	RPUSD4	100	97.878	Colobus_angolensis_palliatus
ENSRBIG00000034842	RPUSD4	100	82.228	ENSCGRG00001024141	Rpusd4	100	82.228	Cricetulus_griseus_chok1gshd
ENSRBIG00000034842	RPUSD4	100	82.228	ENSCGRG00000014415	Rpusd4	100	82.228	Cricetulus_griseus_crigri
ENSRBIG00000034842	RPUSD4	89	47.578	ENSCVAG00000000392	rpusd4	97	48.116	Cyprinodon_variegatus
ENSRBIG00000034842	RPUSD4	88	48.225	ENSCVAG00000008761	rpusd4	91	47.486	Cyprinodon_variegatus
ENSRBIG00000034842	RPUSD4	91	48.266	ENSDARG00000012674	rpusd4	96	48.266	Danio_rerio
ENSRBIG00000034842	RPUSD4	100	77.719	ENSDNOG00000020026	RPUSD4	100	77.719	Dasypus_novemcinctus
ENSRBIG00000034842	RPUSD4	100	79.576	ENSDORG00000016717	Rpusd4	100	79.576	Dipodomys_ordii
ENSRBIG00000034842	RPUSD4	98	77.446	ENSETEG00000013953	RPUSD4	96	78.670	Echinops_telfairi
ENSRBIG00000034842	RPUSD4	100	82.228	ENSEASG00005022982	RPUSD4	100	82.228	Equus_asinus_asinus
ENSRBIG00000034842	RPUSD4	100	81.963	ENSECAG00000000557	RPUSD4	100	81.963	Equus_caballus
ENSRBIG00000034842	RPUSD4	80	80.435	ENSEEUG00000014036	RPUSD4	78	82.857	Erinaceus_europaeus
ENSRBIG00000034842	RPUSD4	90	51.170	ENSELUG00000008075	rpusd4	88	52.083	Esox_lucius
ENSRBIG00000034842	RPUSD4	100	81.167	ENSFCAG00000029789	RPUSD4	100	81.167	Felis_catus
ENSRBIG00000034842	RPUSD4	89	56.637	ENSFALG00000005171	RPUSD4	99	56.805	Ficedula_albicollis
ENSRBIG00000034842	RPUSD4	100	81.432	ENSFDAG00000014307	RPUSD4	100	81.432	Fukomys_damarensis
ENSRBIG00000034842	RPUSD4	89	49.118	ENSFHEG00000004329	rpusd4	86	49.401	Fundulus_heteroclitus
ENSRBIG00000034842	RPUSD4	85	49.538	ENSGMOG00000017726	rpusd4	95	50.000	Gadus_morhua
ENSRBIG00000034842	RPUSD4	87	57.313	ENSGALG00000024326	RPUSD4	94	58.036	Gallus_gallus
ENSRBIG00000034842	RPUSD4	90	45.821	ENSGAFG00000021559	rpusd4	87	46.334	Gambusia_affinis
ENSRBIG00000034842	RPUSD4	77	50.842	ENSGACG00000001657	rpusd4	96	50.181	Gasterosteus_aculeatus
ENSRBIG00000034842	RPUSD4	89	63.095	ENSGAGG00000000132	RPUSD4	93	63.284	Gopherus_agassizii
ENSRBIG00000034842	RPUSD4	100	91.247	ENSGGOG00000016494	RPUSD4	100	91.247	Gorilla_gorilla
ENSRBIG00000034842	RPUSD4	89	49.558	ENSHBUG00000022838	rpusd4	85	50.000	Haplochromis_burtoni
ENSRBIG00000034842	RPUSD4	100	82.759	ENSHGLG00000002285	RPUSD4	100	82.759	Heterocephalus_glaber_female
ENSRBIG00000034842	RPUSD4	100	82.759	ENSHGLG00100006385	RPUSD4	100	82.759	Heterocephalus_glaber_male
ENSRBIG00000034842	RPUSD4	86	51.064	ENSHCOG00000006612	rpusd4	83	50.765	Hippocampus_comes
ENSRBIG00000034842	RPUSD4	89	49.711	ENSIPUG00000023879	rusd4	89	50.000	Ictalurus_punctatus
ENSRBIG00000034842	RPUSD4	97	83.791	ENSSTOG00000025280	RPUSD4	99	83.934	Ictidomys_tridecemlineatus
ENSRBIG00000034842	RPUSD4	99	82.527	ENSJJAG00000018673	Rpusd4	97	84.211	Jaculus_jaculus
ENSRBIG00000034842	RPUSD4	93	48.739	ENSKMAG00000021805	rpusd4	91	49.148	Kryptolebias_marmoratus
ENSRBIG00000034842	RPUSD4	89	47.606	ENSLBEG00000020394	rpusd4	98	47.875	Labrus_bergylta
ENSRBIG00000034842	RPUSD4	85	61.111	ENSLACG00000011028	RPUSD4	81	61.300	Latimeria_chalumnae
ENSRBIG00000034842	RPUSD4	86	46.037	ENSLOCG00000003124	rpusd4	87	46.177	Lepisosteus_oculatus
ENSRBIG00000034842	RPUSD4	100	80.423	ENSLAFG00000005211	RPUSD4	100	80.423	Loxodonta_africana
ENSRBIG00000034842	RPUSD4	100	97.082	ENSMFAG00000039513	RPUSD4	100	97.082	Macaca_fascicularis
ENSRBIG00000034842	RPUSD4	100	96.552	ENSMMUG00000007933	RPUSD4	100	96.552	Macaca_mulatta
ENSRBIG00000034842	RPUSD4	100	96.817	ENSMNEG00000027414	RPUSD4	100	96.817	Macaca_nemestrina
ENSRBIG00000034842	RPUSD4	100	96.286	ENSMLEG00000042461	RPUSD4	100	96.286	Mandrillus_leucophaeus
ENSRBIG00000034842	RPUSD4	85	49.231	ENSMAMG00000023839	rpusd4	82	49.843	Mastacembelus_armatus
ENSRBIG00000034842	RPUSD4	89	49.558	ENSMZEG00005011999	rpusd4	85	50.000	Maylandia_zebra
ENSRBIG00000034842	RPUSD4	84	57.188	ENSMGAG00000000840	RPUSD4	99	57.632	Meleagris_gallopavo
ENSRBIG00000034842	RPUSD4	100	81.698	ENSMAUG00000010280	Rpusd4	96	83.380	Mesocricetus_auratus
ENSRBIG00000034842	RPUSD4	100	83.289	ENSMICG00000015979	RPUSD4	100	83.289	Microcebus_murinus
ENSRBIG00000034842	RPUSD4	100	78.515	ENSMOCG00000000661	Rpusd4	96	80.332	Microtus_ochrogaster
ENSRBIG00000034842	RPUSD4	79	51.485	ENSMMOG00000021731	rpusd4	88	52.189	Mola_mola
ENSRBIG00000034842	RPUSD4	92	71.676	ENSMODG00000004521	RPUSD4	89	71.676	Monodelphis_domestica
ENSRBIG00000034842	RPUSD4	79	50.825	ENSMALG00000005839	rpusd4	89	51.852	Monopterus_albus
ENSRBIG00000034842	RPUSD4	100	80.637	MGP_CAROLIEiJ_G0031954	Rpusd4	100	80.637	Mus_caroli
ENSRBIG00000034842	RPUSD4	100	80.106	ENSMUSG00000032044	Rpusd4	96	81.994	Mus_musculus
ENSRBIG00000034842	RPUSD4	100	80.902	MGP_PahariEiJ_G0014819	Rpusd4	100	80.902	Mus_pahari
ENSRBIG00000034842	RPUSD4	100	80.106	MGP_SPRETEiJ_G0033078	Rpusd4	96	81.717	Mus_spretus
ENSRBIG00000034842	RPUSD4	98	79.515	ENSMPUG00000006608	RPUSD4	96	80.332	Mustela_putorius_furo
ENSRBIG00000034842	RPUSD4	67	84.646	ENSMLUG00000029348	-	99	85.259	Myotis_lucifugus
ENSRBIG00000034842	RPUSD4	98	79.189	ENSMLUG00000017328	-	96	80.663	Myotis_lucifugus
ENSRBIG00000034842	RPUSD4	98	78.976	ENSNGAG00000020847	Rpusd4	96	79.778	Nannospalax_galili
ENSRBIG00000034842	RPUSD4	86	50.456	ENSNBRG00000005207	rpusd4	93	50.926	Neolamprologus_brichardi
ENSRBIG00000034842	RPUSD4	100	91.777	ENSNLEG00000007465	RPUSD4	100	91.777	Nomascus_leucogenys
ENSRBIG00000034842	RPUSD4	98	69.189	ENSMEUG00000004370	RPUSD4	97	70.914	Notamacropus_eugenii
ENSRBIG00000034842	RPUSD4	70	60.377	ENSOPRG00000013141	-	100	60.377	Ochotona_princeps
ENSRBIG00000034842	RPUSD4	100	81.167	ENSODEG00000004577	RPUSD4	100	81.167	Octodon_degus
ENSRBIG00000034842	RPUSD4	93	47.397	ENSONIG00000018879	rpusd4	96	47.778	Oreochromis_niloticus
ENSRBIG00000034842	RPUSD4	77	69.492	ENSOANG00000007247	RPUSD4	95	69.360	Ornithorhynchus_anatinus
ENSRBIG00000034842	RPUSD4	98	82.703	ENSOCUG00000017039	RPUSD4	98	82.703	Oryctolagus_cuniculus
ENSRBIG00000034842	RPUSD4	91	46.991	ENSORLG00000002750	rpusd4	92	48.368	Oryzias_latipes
ENSRBIG00000034842	RPUSD4	80	50.000	ENSORLG00020002044	rpusd4	73	51.701	Oryzias_latipes_hni
ENSRBIG00000034842	RPUSD4	87	48.649	ENSORLG00015020034	rpusd4	79	50.156	Oryzias_latipes_hsok
ENSRBIG00000034842	RPUSD4	88	48.961	ENSOMEG00000004861	rpusd4	78	50.629	Oryzias_melastigma
ENSRBIG00000034842	RPUSD4	100	80.423	ENSOGAG00000008922	RPUSD4	100	80.423	Otolemur_garnettii
ENSRBIG00000034842	RPUSD4	98	78.378	ENSOARG00000012238	RPUSD4	97	78.378	Ovis_aries
ENSRBIG00000034842	RPUSD4	100	91.777	ENSPPAG00000042883	RPUSD4	93	91.777	Pan_paniscus
ENSRBIG00000034842	RPUSD4	100	81.167	ENSPPRG00000003081	RPUSD4	96	82.825	Panthera_pardus
ENSRBIG00000034842	RPUSD4	100	81.167	ENSPTIG00000012059	RPUSD4	96	82.825	Panthera_tigris_altaica
ENSRBIG00000034842	RPUSD4	100	91.512	ENSPTRG00000004454	RPUSD4	100	91.512	Pan_troglodytes
ENSRBIG00000034842	RPUSD4	100	96.552	ENSPANG00000015040	RPUSD4	100	96.552	Papio_anubis
ENSRBIG00000034842	RPUSD4	89	55.917	ENSPKIG00000023986	rpusd4	86	56.250	Paramormyrops_kingsleyae
ENSRBIG00000034842	RPUSD4	79	67.450	ENSPSIG00000014268	RPUSD4	94	67.677	Pelodiscus_sinensis
ENSRBIG00000034842	RPUSD4	86	48.024	ENSPMGG00000002806	rpusd4	89	48.607	Periophthalmus_magnuspinnatus
ENSRBIG00000034842	RPUSD4	100	73.210	ENSPEMG00000000278	Rpusd4	100	73.210	Peromyscus_maniculatus_bairdii
ENSRBIG00000034842	RPUSD4	81	44.248	ENSPMAG00000008183	rpusd4	96	45.015	Petromyzon_marinus
ENSRBIG00000034842	RPUSD4	97	70.879	ENSPCIG00000010212	RPUSD4	99	71.468	Phascolarctos_cinereus
ENSRBIG00000034842	RPUSD4	90	48.011	ENSPFOG00000019030	rpusd4	89	48.555	Poecilia_formosa
ENSRBIG00000034842	RPUSD4	90	48.571	ENSPLAG00000016848	rpusd4	86	49.128	Poecilia_latipinna
ENSRBIG00000034842	RPUSD4	90	47.714	ENSPMEG00000017534	rpusd4	86	48.256	Poecilia_mexicana
ENSRBIG00000034842	RPUSD4	84	49.544	ENSPREG00000005689	rpusd4	84	49.544	Poecilia_reticulata
ENSRBIG00000034842	RPUSD4	100	92.308	ENSPPYG00000004043	RPUSD4	100	92.308	Pongo_abelii
ENSRBIG00000034842	RPUSD4	80	81.522	ENSPCAG00000000753	RPUSD4	79	84.571	Procavia_capensis
ENSRBIG00000034842	RPUSD4	98	76.819	ENSPCOG00000020694	RPUSD4	97	77.562	Propithecus_coquereli
ENSRBIG00000034842	RPUSD4	97	83.106	ENSPVAG00000000988	RPUSD4	97	83.657	Pteropus_vampyrus
ENSRBIG00000034842	RPUSD4	89	48.673	ENSPNYG00000009652	rpusd4	85	49.102	Pundamilia_nyererei
ENSRBIG00000034842	RPUSD4	88	50.898	ENSPNAG00000012264	rpusd4	87	51.205	Pygocentrus_nattereri
ENSRBIG00000034842	RPUSD4	100	80.371	ENSRNOG00000011567	Rpusd4	96	82.548	Rattus_norvegicus
ENSRBIG00000034842	RPUSD4	100	100.000	ENSRROG00000039753	RPUSD4	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000034842	RPUSD4	99	87.903	ENSSBOG00000030413	RPUSD4	97	89.197	Saimiri_boliviensis_boliviensis
ENSRBIG00000034842	RPUSD4	80	76.412	ENSSHAG00000008304	RPUSD4	99	77.181	Sarcophilus_harrisii
ENSRBIG00000034842	RPUSD4	90	54.046	ENSSFOG00015006203	rpusd4	93	54.942	Scleropages_formosus
ENSRBIG00000034842	RPUSD4	94	47.075	ENSSMAG00000020978	rpusd4	92	47.989	Scophthalmus_maximus
ENSRBIG00000034842	RPUSD4	94	45.187	ENSSDUG00000013399	rpusd4	96	45.676	Seriola_dumerili
ENSRBIG00000034842	RPUSD4	93	45.040	ENSSLDG00000023507	rpusd4	96	45.405	Seriola_lalandi_dorsalis
ENSRBIG00000034842	RPUSD4	89	60.588	ENSSPUG00000001401	RPUSD4	93	61.493	Sphenodon_punctatus
ENSRBIG00000034842	RPUSD4	88	49.854	ENSSPAG00000012163	rpusd4	86	50.742	Stegastes_partitus
ENSRBIG00000034842	RPUSD4	100	80.902	ENSSSCG00000015233	RPUSD4	96	82.825	Sus_scrofa
ENSRBIG00000034842	RPUSD4	78	60.606	ENSTGUG00000000773	RPUSD4	99	60.606	Taeniopygia_guttata
ENSRBIG00000034842	RPUSD4	88	48.955	ENSTRUG00000012283	rpusd4	84	49.547	Takifugu_rubripes
ENSRBIG00000034842	RPUSD4	89	47.647	ENSTNIG00000014676	rpusd4	85	48.204	Tetraodon_nigroviridis
ENSRBIG00000034842	RPUSD4	100	80.106	ENSTTRG00000001555	RPUSD4	100	80.106	Tursiops_truncatus
ENSRBIG00000034842	RPUSD4	100	81.167	ENSUMAG00000002219	RPUSD4	100	81.167	Ursus_maritimus
ENSRBIG00000034842	RPUSD4	70	81.132	ENSVPAG00000001066	RPUSD4	100	81.132	Vicugna_pacos
ENSRBIG00000034842	RPUSD4	100	79.365	ENSVVUG00000020101	RPUSD4	100	79.365	Vulpes_vulpes
ENSRBIG00000034842	RPUSD4	91	45.730	ENSXCOG00000004676	rpusd4	93	46.218	Xiphophorus_couchianus
ENSRBIG00000034842	RPUSD4	90	46.974	ENSXMAG00000023351	rpusd4	87	47.507	Xiphophorus_maculatus