EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000035461 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 30010 bases
Position: chrMCGX01005505.1:613130-643139
Accession: 108538442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000023064	PWI	PF01480.17	8.8e-30	1	1
ENSRBIP00000023062	PWI	PF01480.17	9.5e-30	1	1
ENSRBIP00000023061	PWI	PF01480.17	9.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000046957	SRRM1-204	2415	XM_017886523	ENSRBIP00000023064	804 (aa)	XP_017742012	A0A2K6LHS0
ENSRBIT00000046948	SRRM1-201	4047	-	ENSRBIP00000023056	80 (aa)	-	A0A2K6LHP0
ENSRBIT00000046955	SRRM1-203	2604	-	ENSRBIP00000023062	868 (aa)	-	A0A2K6LHU7
ENSRBIT00000046954	SRRM1-202	2631	-	ENSRBIP00000023061	877 (aa)	-	A0A2K6LHP5

Gene Model

Click here to download ENSRBIG00000035461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000035461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000035461	SRRM1	99	92.982	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSRBIG00000035461	SRRM1	99	92.342	ENSAMEG00000010075	SRRM1	99	92.342	Ailuropoda_melanoleuca
ENSRBIG00000035461	SRRM1	99	92.027	ENSANAG00000035606	SRRM1	99	92.027	Aotus_nancymaae
ENSRBIG00000035461	SRRM1	99	91.776	ENSCJAG00000020822	SRRM1	99	91.776	Callithrix_jacchus
ENSRBIG00000035461	SRRM1	93	96.990	ENSCAFG00020020948	SRRM1	99	95.149	Canis_lupus_dingo
ENSRBIG00000035461	SRRM1	99	91.667	ENSTSYG00000006782	SRRM1	99	91.667	Carlito_syrichta
ENSRBIG00000035461	SRRM1	99	91.996	ENSCCAG00000029474	SRRM1	96	98.783	Cebus_capucinus
ENSRBIG00000035461	SRRM1	99	92.913	ENSCATG00000031303	SRRM1	100	93.091	Cercocebus_atys
ENSRBIG00000035461	SRRM1	71	98.592	ENSCHOG00000000027	SRRM1	69	98.592	Choloepus_hoffmanni
ENSRBIG00000035461	SRRM1	99	92.982	ENSCANG00000028271	SRRM1	99	92.982	Colobus_angolensis_palliatus
ENSRBIG00000035461	SRRM1	99	90.508	ENSEASG00005004270	SRRM1	99	90.508	Equus_asinus_asinus
ENSRBIG00000035461	SRRM1	99	91.143	ENSECAG00000026981	SRRM1	99	91.143	Equus_caballus
ENSRBIG00000035461	SRRM1	99	92.489	ENSFCAG00000000678	-	99	92.489	Felis_catus
ENSRBIG00000035461	SRRM1	99	92.873	ENSGGOG00000005209	SRRM1	99	92.873	Gorilla_gorilla
ENSRBIG00000035461	SRRM1	75	76.842	ENSMFAG00000038841	-	59	74.840	Macaca_fascicularis
ENSRBIG00000035461	SRRM1	99	93.023	ENSMFAG00000025726	SRRM1	100	93.091	Macaca_fascicularis
ENSRBIG00000035461	SRRM1	99	92.913	ENSMMUG00000006645	SRRM1	100	92.970	Macaca_mulatta
ENSRBIG00000035461	SRRM1	99	93.023	ENSMNEG00000039415	SRRM1	100	93.091	Macaca_nemestrina
ENSRBIG00000035461	SRRM1	57	62.384	ENSMLEG00000032221	-	58	66.335	Mandrillus_leucophaeus
ENSRBIG00000035461	SRRM1	62	98.802	ENSMLEG00000038030	-	92	98.802	Mandrillus_leucophaeus
ENSRBIG00000035461	SRRM1	99	92.982	ENSNLEG00000008966	SRRM1	95	98.603	Nomascus_leucogenys
ENSRBIG00000035461	SRRM1	53	80.000	ENSMEUG00000014704	SRRM1	53	80.000	Notamacropus_eugenii
ENSRBIG00000035461	SRRM1	99	92.873	ENSPPAG00000043918	SRRM1	99	92.873	Pan_paniscus
ENSRBIG00000035461	SRRM1	99	92.489	ENSPPRG00000002509	SRRM1	99	92.489	Panthera_pardus
ENSRBIG00000035461	SRRM1	99	92.913	ENSPTRG00000000349	SRRM1	99	92.913	Pan_troglodytes
ENSRBIG00000035461	SRRM1	52	71.726	ENSPANG00000035568	-	56	71.855	Papio_anubis
ENSRBIG00000035461	SRRM1	99	92.299	ENSPANG00000010194	SRRM1	100	93.091	Papio_anubis
ENSRBIG00000035461	SRRM1	99	92.552	ENSPPYG00000001716	SRRM1	99	92.552	Pongo_abelii
ENSRBIG00000035461	SRRM1	50	100.000	ENSPCAG00000015138	SRRM1	51	100.000	Procavia_capensis
ENSRBIG00000035461	SRRM1	99	91.898	ENSPVAG00000005836	SRRM1	99	91.898	Pteropus_vampyrus
ENSRBIG00000035461	SRRM1	99	93.311	ENSRROG00000035151	SRRM1	100	93.333	Rhinopithecus_roxellana
ENSRBIG00000035461	SRRM1	99	91.898	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSRBIG00000035461	SRRM1	85	89.388	ENSSARG00000013718	SRRM1	85	89.474	Sorex_araneus
ENSRBIG00000035461	SRRM1	99	90.989	ENSSSCG00000032947	SRRM1	99	91.234	Sus_scrofa
ENSRBIG00000035461	SRRM1	99	91.275	ENSTTRG00000009365	SRRM1	99	91.275	Tursiops_truncatus
ENSRBIG00000035461	SRRM1	95	89.468	ENSVPAG00000007698	SRRM1	99	89.468	Vicugna_pacos
ENSRBIG00000035461	SRRM1	93	96.466	ENSVVUG00000026966	SRRM1	99	86.374	Vulpes_vulpes