EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000035488 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 28902 bases
Position: chrMCGX01006212.1:1186389-1215290
Accession: 108539516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000023126	zf-C2H2	PF00096.26	6.7e-19	1	2
ENSRBIP00000023126	zf-C2H2	PF00096.26	6.7e-19	2	2
ENSRBIP00000023126	zf-met	PF12874.7	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000047019	PRDM4-201	4207	XM_017888272	ENSRBIP00000023126	801 (aa)	XP_017743761	A0A2K6LHW6

Gene Model

Click here to download ENSRBIG00000035488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000035488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000035488	PRDM4	100	99.501	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSRBIG00000035488	PRDM4	99	97.121	ENSAMEG00000016174	PRDM4	99	97.121	Ailuropoda_melanoleuca
ENSRBIG00000035488	PRDM4	99	87.594	ENSAPLG00000009846	PRDM4	99	86.967	Anas_platyrhynchos
ENSRBIG00000035488	PRDM4	100	98.876	ENSANAG00000024800	PRDM4	100	98.876	Aotus_nancymaae
ENSRBIG00000035488	PRDM4	100	97.004	ENSBTAG00000012999	PRDM4	100	97.004	Bos_taurus
ENSRBIG00000035488	PRDM4	100	98.377	ENSCJAG00000015261	PRDM4	100	98.377	Callithrix_jacchus
ENSRBIG00000035488	PRDM4	100	97.129	ENSCAFG00000001788	PRDM4	100	97.129	Canis_familiaris
ENSRBIG00000035488	PRDM4	100	97.129	ENSCAFG00020004916	PRDM4	100	97.129	Canis_lupus_dingo
ENSRBIG00000035488	PRDM4	100	96.629	ENSCHIG00000019409	PRDM4	100	96.629	Capra_hircus
ENSRBIG00000035488	PRDM4	100	97.378	ENSTSYG00000009248	PRDM4	100	97.378	Carlito_syrichta
ENSRBIG00000035488	PRDM4	99	90.488	ENSCAPG00000013937	PRDM4	99	90.363	Cavia_aperea
ENSRBIG00000035488	PRDM4	99	89.938	ENSCPOG00000022385	PRDM4	100	89.814	Cavia_porcellus
ENSRBIG00000035488	PRDM4	100	99.001	ENSCCAG00000036033	PRDM4	100	99.001	Cebus_capucinus
ENSRBIG00000035488	PRDM4	100	99.376	ENSCATG00000044797	PRDM4	100	99.376	Cercocebus_atys
ENSRBIG00000035488	PRDM4	99	92.786	ENSCLAG00000007545	PRDM4	100	93.159	Chinchilla_lanigera
ENSRBIG00000035488	PRDM4	100	99.625	ENSCSAG00000002896	PRDM4	100	99.625	Chlorocebus_sabaeus
ENSRBIG00000035488	PRDM4	71	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSRBIG00000035488	PRDM4	99	88.582	ENSCPBG00000023187	PRDM4	100	88.206	Chrysemys_picta_bellii
ENSRBIG00000035488	PRDM4	100	99.750	ENSCANG00000021804	PRDM4	100	99.750	Colobus_angolensis_palliatus
ENSRBIG00000035488	PRDM4	99	92.910	ENSCGRG00001015102	-	100	92.537	Cricetulus_griseus_chok1gshd
ENSRBIG00000035488	PRDM4	96	92.903	ENSCGRG00000004044	-	100	92.516	Cricetulus_griseus_crigri
ENSRBIG00000035488	PRDM4	100	96.255	ENSDNOG00000032478	PRDM4	100	96.255	Dasypus_novemcinctus
ENSRBIG00000035488	PRDM4	99	81.932	ENSDORG00000015081	-	100	81.681	Dipodomys_ordii
ENSRBIG00000035488	PRDM4	93	46.078	ENSEBUG00000003775	prdm4	99	46.047	Eptatretus_burgeri
ENSRBIG00000035488	PRDM4	100	97.129	ENSECAG00000015423	PRDM4	100	97.129	Equus_caballus
ENSRBIG00000035488	PRDM4	94	93.076	ENSEEUG00000006569	PRDM4	99	92.676	Erinaceus_europaeus
ENSRBIG00000035488	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.753	Esox_lucius
ENSRBIG00000035488	PRDM4	100	97.628	ENSFCAG00000022478	PRDM4	100	97.628	Felis_catus
ENSRBIG00000035488	PRDM4	99	87.955	ENSFALG00000013342	PRDM4	100	87.453	Ficedula_albicollis
ENSRBIG00000035488	PRDM4	100	87.173	ENSGALG00000012619	PRDM4	100	86.550	Gallus_gallus
ENSRBIG00000035488	PRDM4	99	88.221	ENSGAGG00000002763	PRDM4	95	87.845	Gopherus_agassizii
ENSRBIG00000035488	PRDM4	99	99.625	ENSGGOG00000001244	PRDM4	99	99.625	Gorilla_gorilla
ENSRBIG00000035488	PRDM4	99	93.852	ENSHGLG00000004590	PRDM4	98	93.601	Heterocephalus_glaber_female
ENSRBIG00000035488	PRDM4	99	92.795	ENSHGLG00100007464	PRDM4	100	92.547	Heterocephalus_glaber_male
ENSRBIG00000035488	PRDM4	95	61.658	ENSIPUG00000024162	prdm4	93	62.010	Ictalurus_punctatus
ENSRBIG00000035488	PRDM4	100	96.504	ENSSTOG00000016168	PRDM4	100	96.504	Ictidomys_tridecemlineatus
ENSRBIG00000035488	PRDM4	82	93.280	ENSJJAG00000022448	-	95	93.280	Jaculus_jaculus
ENSRBIG00000035488	PRDM4	99	72.896	ENSLACG00000007452	PRDM4	99	73.144	Latimeria_chalumnae
ENSRBIG00000035488	PRDM4	78	42.480	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSRBIG00000035488	PRDM4	98	96.447	ENSLAFG00000001483	PRDM4	100	96.447	Loxodonta_africana
ENSRBIG00000035488	PRDM4	100	99.750	ENSMFAG00000041862	PRDM4	100	99.750	Macaca_fascicularis
ENSRBIG00000035488	PRDM4	100	99.750	ENSMMUG00000015550	PRDM4	100	99.750	Macaca_mulatta
ENSRBIG00000035488	PRDM4	100	99.501	ENSMNEG00000032319	PRDM4	100	99.501	Macaca_nemestrina
ENSRBIG00000035488	PRDM4	100	99.625	ENSMLEG00000039607	PRDM4	100	99.625	Mandrillus_leucophaeus
ENSRBIG00000035488	PRDM4	99	79.750	ENSMGAG00000012815	PRDM4	100	79.125	Meleagris_gallopavo
ENSRBIG00000035488	PRDM4	100	96.380	ENSMICG00000007807	PRDM4	100	96.380	Microcebus_murinus
ENSRBIG00000035488	PRDM4	99	93.985	ENSMOCG00000000753	Prdm4	99	93.734	Microtus_ochrogaster
ENSRBIG00000035488	PRDM4	99	94.354	ENSMUSG00000035529	Prdm4	100	94.103	Mus_musculus
ENSRBIG00000035488	PRDM4	99	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSRBIG00000035488	PRDM4	99	94.981	MGP_SPRETEiJ_G0016505	Prdm4	100	95.044	Mus_spretus
ENSRBIG00000035488	PRDM4	99	91.022	ENSMPUG00000012238	PRDM4	99	91.022	Mustela_putorius_furo
ENSRBIG00000035488	PRDM4	99	96.867	ENSMLUG00000000767	PRDM4	99	96.867	Myotis_lucifugus
ENSRBIG00000035488	PRDM4	99	95.483	ENSNGAG00000018627	Prdm4	100	95.483	Nannospalax_galili
ENSRBIG00000035488	PRDM4	100	99.376	ENSNLEG00000006748	PRDM4	100	99.376	Nomascus_leucogenys
ENSRBIG00000035488	PRDM4	89	89.202	ENSMEUG00000004495	PRDM4	89	89.202	Notamacropus_eugenii
ENSRBIG00000035488	PRDM4	88	95.238	ENSOPRG00000010192	PRDM4	89	95.238	Ochotona_princeps
ENSRBIG00000035488	PRDM4	99	90.500	ENSODEG00000014750	PRDM4	99	90.375	Octodon_degus
ENSRBIG00000035488	PRDM4	100	90.762	ENSOANG00000005526	PRDM4	100	90.762	Ornithorhynchus_anatinus
ENSRBIG00000035488	PRDM4	93	96.423	ENSOCUG00000012859	PRDM4	96	96.423	Oryctolagus_cuniculus
ENSRBIG00000035488	PRDM4	99	97.616	ENSOGAG00000011945	PRDM4	100	97.616	Otolemur_garnettii
ENSRBIG00000035488	PRDM4	100	96.380	ENSOARG00000017955	PRDM4	100	96.380	Ovis_aries
ENSRBIG00000035488	PRDM4	100	99.501	ENSPPAG00000038438	PRDM4	100	99.501	Pan_paniscus
ENSRBIG00000035488	PRDM4	100	97.628	ENSPPRG00000004144	PRDM4	100	97.628	Panthera_pardus
ENSRBIG00000035488	PRDM4	100	97.628	ENSPTIG00000005847	PRDM4	100	97.628	Panthera_tigris_altaica
ENSRBIG00000035488	PRDM4	100	99.501	ENSPTRG00000005400	PRDM4	100	99.501	Pan_troglodytes
ENSRBIG00000035488	PRDM4	100	99.750	ENSPANG00000022084	PRDM4	100	99.750	Papio_anubis
ENSRBIG00000035488	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSRBIG00000035488	PRDM4	91	81.559	ENSPSIG00000012066	PRDM4	100	81.559	Pelodiscus_sinensis
ENSRBIG00000035488	PRDM4	99	95.358	ENSPEMG00000014598	Prdm4	100	95.358	Peromyscus_maniculatus_bairdii
ENSRBIG00000035488	PRDM4	100	89.179	ENSPCIG00000009471	PRDM4	100	89.179	Phascolarctos_cinereus
ENSRBIG00000035488	PRDM4	100	99.376	ENSPPYG00000004913	PRDM4	100	99.376	Pongo_abelii
ENSRBIG00000035488	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSRBIG00000035488	PRDM4	100	96.629	ENSPCOG00000021060	PRDM4	100	96.629	Propithecus_coquereli
ENSRBIG00000035488	PRDM4	100	96.633	ENSPVAG00000001596	PRDM4	100	96.633	Pteropus_vampyrus
ENSRBIG00000035488	PRDM4	99	93.734	ENSRNOG00000004962	Prdm4	100	93.484	Rattus_norvegicus
ENSRBIG00000035488	PRDM4	100	99.875	ENSRROG00000012779	PRDM4	100	99.875	Rhinopithecus_roxellana
ENSRBIG00000035488	PRDM4	100	98.876	ENSSBOG00000000403	PRDM4	100	98.876	Saimiri_boliviensis_boliviensis
ENSRBIG00000035488	PRDM4	99	63.670	ENSSFOG00015023358	prdm4	99	63.670	Scleropages_formosus
ENSRBIG00000035488	PRDM4	100	97.129	ENSSSCG00000000160	PRDM4	100	97.129	Sus_scrofa
ENSRBIG00000035488	PRDM4	99	87.845	ENSTGUG00000010962	-	99	87.343	Taeniopygia_guttata
ENSRBIG00000035488	PRDM4	73	89.761	ENSTBEG00000001732	PRDM4	84	89.761	Tupaia_belangeri
ENSRBIG00000035488	PRDM4	100	96.504	ENSTTRG00000011056	PRDM4	100	96.504	Tursiops_truncatus
ENSRBIG00000035488	PRDM4	100	97.503	ENSUAMG00000022796	PRDM4	100	97.503	Ursus_americanus
ENSRBIG00000035488	PRDM4	100	97.503	ENSUMAG00000017231	PRDM4	100	97.503	Ursus_maritimus
ENSRBIG00000035488	PRDM4	99	97.365	ENSVPAG00000002215	PRDM4	100	97.365	Vicugna_pacos
ENSRBIG00000035488	PRDM4	100	97.129	ENSVVUG00000023397	PRDM4	100	97.129	Vulpes_vulpes