EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000035817 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop-interacting RNA-binding protein%2C mitochondrial-like
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 320 bases
Position: chrMCGX01001386.1:2704854-2705173
Accession: 108526473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000023806	RRM_1	PF00076.22	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000047703	-	303	XM_017867259	ENSRBIP00000023806	100 (aa)	XP_017722748	A0A2K6LJX3

Gene Model

Click here to download ENSRBIG00000035817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000035817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000035817	-	71	88.312	ENSRBIG00000032998	-	71	88.312
ENSRBIG00000035817	-	85	85.714	ENSRBIG00000031396	-	91	85.714
ENSRBIG00000035817	-	100	93.396	ENSRBIG00000032222	-	98	93.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000035817	-	86	77.174	ENSG00000119705	SLIRP	97	80.899	Homo_sapiens
ENSRBIG00000035817	-	68	54.054	ENSAPOG00000001298	slirp	74	54.054	Acanthochromis_polyacanthus
ENSRBIG00000035817	-	85	74.725	ENSAMEG00000003975	SLIRP	88	72.500	Ailuropoda_melanoleuca
ENSRBIG00000035817	-	76	53.012	ENSACIG00000023083	slirp	82	53.012	Amphilophus_citrinellus
ENSRBIG00000035817	-	78	51.765	ENSAOCG00000006342	slirp	86	51.765	Amphiprion_ocellaris
ENSRBIG00000035817	-	78	51.765	ENSAPEG00000015719	-	87	51.765	Amphiprion_percula
ENSRBIG00000035817	-	78	51.765	ENSAPEG00000015917	slirp	86	51.765	Amphiprion_percula
ENSRBIG00000035817	-	68	54.054	ENSATEG00000013525	slirp	74	54.054	Anabas_testudineus
ENSRBIG00000035817	-	79	48.235	ENSAMXG00000018693	slirp	85	48.235	Astyanax_mexicanus
ENSRBIG00000035817	-	100	77.358	ENSCJAG00000016946	SLIRP	88	77.895	Callithrix_jacchus
ENSRBIG00000035817	-	100	73.394	ENSCAFG00020015876	-	88	72.449	Canis_lupus_dingo
ENSRBIG00000035817	-	100	75.472	ENSCCAG00000030130	SLIRP	88	75.789	Cebus_capucinus
ENSRBIG00000035817	-	100	86.792	ENSCATG00000036327	SLIRP	87	86.316	Cercocebus_atys
ENSRBIG00000035817	-	89	88.421	ENSCSAG00000011736	SLIRP	87	88.421	Chlorocebus_sabaeus
ENSRBIG00000035817	-	64	55.714	ENSCPBG00000026327	SLIRP	71	55.714	Chrysemys_picta_bellii
ENSRBIG00000035817	-	83	89.888	ENSCANG00000032892	SLIRP	91	89.888	Colobus_angolensis_palliatus
ENSRBIG00000035817	-	99	63.889	ENSCGRG00001024068	Slirp	82	67.033	Cricetulus_griseus_chok1gshd
ENSRBIG00000035817	-	99	63.889	ENSCGRG00000017440	Slirp	82	67.033	Cricetulus_griseus_crigri
ENSRBIG00000035817	-	86	47.826	ENSCSEG00000015766	slirp	75	50.000	Cynoglossus_semilaevis
ENSRBIG00000035817	-	63	59.420	ENSCVAG00000012504	slirp	68	59.420	Cyprinodon_variegatus
ENSRBIG00000035817	-	69	56.000	ENSDARG00000097753	slirp	72	56.757	Danio_rerio
ENSRBIG00000035817	-	82	63.333	ENSDNOG00000007721	SLIRP	88	60.825	Dasypus_novemcinctus
ENSRBIG00000035817	-	100	65.138	ENSDORG00000012379	Slirp	88	65.306	Dipodomys_ordii
ENSRBIG00000035817	-	89	62.105	ENSETEG00000010345	SLIRP	98	64.151	Echinops_telfairi
ENSRBIG00000035817	-	100	73.394	ENSEASG00005020193	SLIRP	88	71.429	Equus_asinus_asinus
ENSRBIG00000035817	-	96	51.923	ENSEEUG00000007257	SLIRP	89	54.444	Erinaceus_europaeus
ENSRBIG00000035817	-	68	54.054	ENSELUG00000016800	slirp	73	54.054	Esox_lucius
ENSRBIG00000035817	-	83	75.281	ENSFCAG00000036326	SLIRP	80	74.359	Felis_catus
ENSRBIG00000035817	-	65	47.887	ENSFALG00000012583	SLIRP	67	47.887	Ficedula_albicollis
ENSRBIG00000035817	-	99	61.947	ENSFDAG00000008347	SLIRP	86	61.856	Fukomys_damarensis
ENSRBIG00000035817	-	69	51.316	ENSFHEG00000004709	slirp	83	51.316	Fundulus_heteroclitus
ENSRBIG00000035817	-	68	54.054	ENSGMOG00000016948	slirp	71	54.054	Gadus_morhua
ENSRBIG00000035817	-	78	45.238	ENSGALG00000031238	SLIRP	71	52.239	Gallus_gallus
ENSRBIG00000035817	-	69	57.333	ENSGAFG00000010998	slirp	75	57.333	Gambusia_affinis
ENSRBIG00000035817	-	65	52.113	ENSGACG00000020137	slirp	83	52.113	Gasterosteus_aculeatus
ENSRBIG00000035817	-	74	53.750	ENSGAGG00000009953	SLIRP	55	53.750	Gopherus_agassizii
ENSRBIG00000035817	-	86	77.174	ENSGGOG00000011059	-	96	80.899	Gorilla_gorilla
ENSRBIG00000035817	-	100	57.798	ENSHGLG00000018491	SLIRP	88	56.122	Heterocephalus_glaber_female
ENSRBIG00000035817	-	100	57.798	ENSHGLG00100014153	SLIRP	88	56.122	Heterocephalus_glaber_male
ENSRBIG00000035817	-	79	53.488	ENSHCOG00000006795	slirp	87	53.488	Hippocampus_comes
ENSRBIG00000035817	-	79	48.235	ENSIPUG00000010214	SLIRP	85	48.235	Ictalurus_punctatus
ENSRBIG00000035817	-	89	68.367	ENSSTOG00000034316	SLIRP	88	68.367	Ictidomys_tridecemlineatus
ENSRBIG00000035817	-	64	48.571	ENSKMAG00000002038	slirp	67	48.571	Kryptolebias_marmoratus
ENSRBIG00000035817	-	79	50.575	ENSLBEG00000007564	slirp	74	52.703	Labrus_bergylta
ENSRBIG00000035817	-	69	56.000	ENSLACG00000013434	SLIRP	71	56.757	Latimeria_chalumnae
ENSRBIG00000035817	-	89	87.368	ENSMFAG00000042960	SLIRP	97	87.736	Macaca_fascicularis
ENSRBIG00000035817	-	89	85.263	ENSMMUG00000029256	SLIRP	96	88.764	Macaca_mulatta
ENSRBIG00000035817	-	89	87.368	ENSMNEG00000028921	SLIRP	97	87.736	Macaca_nemestrina
ENSRBIG00000035817	-	83	87.640	ENSMLEG00000043644	SLIRP	79	88.312	Mandrillus_leucophaeus
ENSRBIG00000035817	-	78	54.118	ENSMZEG00005004617	slirp	86	54.118	Maylandia_zebra
ENSRBIG00000035817	-	100	66.972	ENSMAUG00000003857	Slirp	88	67.347	Mesocricetus_auratus
ENSRBIG00000035817	-	100	65.138	ENSMICG00000012080	SLIRP	88	65.306	Microcebus_murinus
ENSRBIG00000035817	-	99	68.519	ENSMOCG00000016019	Slirp	96	68.519	Microtus_ochrogaster
ENSRBIG00000035817	-	79	50.575	ENSMMOG00000018268	slirp	85	49.412	Mola_mola
ENSRBIG00000035817	-	65	57.746	ENSMODG00000005207	-	100	57.746	Monodelphis_domestica
ENSRBIG00000035817	-	81	51.724	ENSMALG00000012581	slirp	76	56.757	Monopterus_albus
ENSRBIG00000035817	-	99	67.593	MGP_CAROLIEiJ_G0017995	Slirp	90	68.041	Mus_caroli
ENSRBIG00000035817	-	99	68.519	ENSMUSG00000021040	Slirp	87	69.231	Mus_musculus
ENSRBIG00000035817	-	99	68.519	MGP_SPRETEiJ_G0018840	Slirp	87	69.231	Mus_spretus
ENSRBIG00000035817	-	81	67.778	ENSMLUG00000024998	-	98	66.055	Myotis_lucifugus
ENSRBIG00000035817	-	89	63.265	ENSMLUG00000029544	-	98	64.220	Myotis_lucifugus
ENSRBIG00000035817	-	99	65.741	ENSNGAG00000016363	Slirp	86	71.910	Nannospalax_galili
ENSRBIG00000035817	-	92	71.429	ENSNLEG00000027238	-	91	72.152	Nomascus_leucogenys
ENSRBIG00000035817	-	100	75.472	ENSNLEG00000032459	-	87	73.684	Nomascus_leucogenys
ENSRBIG00000035817	-	99	72.222	ENSODEG00000012580	SLIRP	87	73.750	Octodon_degus
ENSRBIG00000035817	-	68	56.757	ENSONIG00000011692	slirp	75	56.757	Oreochromis_niloticus
ENSRBIG00000035817	-	86	54.348	ENSOANG00000022366	SLIRP	66	64.384	Ornithorhynchus_anatinus
ENSRBIG00000035817	-	68	54.054	ENSORLG00000010761	slirp	66	50.588	Oryzias_latipes
ENSRBIG00000035817	-	68	55.405	ENSORLG00020022188	slirp	82	53.659	Oryzias_latipes_hni
ENSRBIG00000035817	-	99	45.283	ENSORLG00015020171	slirp	84	50.588	Oryzias_latipes_hsok
ENSRBIG00000035817	-	76	53.012	ENSOMEG00000019321	slirp	83	53.012	Oryzias_melastigma
ENSRBIG00000035817	-	86	76.087	ENSPPAG00000040710	-	96	80.899	Pan_paniscus
ENSRBIG00000035817	-	83	75.281	ENSPPRG00000014350	SLIRP	80	74.359	Panthera_pardus
ENSRBIG00000035817	-	83	75.281	ENSPTIG00000014196	SLIRP	80	74.359	Panthera_tigris_altaica
ENSRBIG00000035817	-	86	77.174	ENSPTRG00000030691	SLIRP	100	79.245	Pan_troglodytes
ENSRBIG00000035817	-	100	88.679	ENSPANG00000026323	SLIRP	96	88.764	Papio_anubis
ENSRBIG00000035817	-	61	50.746	ENSPKIG00000008831	slirp	66	50.746	Paramormyrops_kingsleyae
ENSRBIG00000035817	-	63	62.319	ENSPMGG00000010541	slirp	79	62.319	Periophthalmus_magnuspinnatus
ENSRBIG00000035817	-	80	68.889	ENSPEMG00000013234	Slirp	96	63.303	Peromyscus_maniculatus_bairdii
ENSRBIG00000035817	-	62	45.588	ENSPMAG00000009355	slirp	76	45.588	Petromyzon_marinus
ENSRBIG00000035817	-	84	51.111	ENSPCIG00000026842	-	77	56.944	Phascolarctos_cinereus
ENSRBIG00000035817	-	68	55.405	ENSPFOG00000006758	slirp	74	55.405	Poecilia_formosa
ENSRBIG00000035817	-	68	55.405	ENSPLAG00000011140	slirp	74	55.405	Poecilia_latipinna
ENSRBIG00000035817	-	68	55.405	ENSPMEG00000019535	slirp	74	55.405	Poecilia_mexicana
ENSRBIG00000035817	-	68	55.405	ENSPREG00000011673	slirp	74	55.405	Poecilia_reticulata
ENSRBIG00000035817	-	89	74.737	ENSPPYG00000006030	SLIRP	97	76.415	Pongo_abelii
ENSRBIG00000035817	-	100	66.055	ENSPCOG00000015159	SLIRP	88	66.327	Propithecus_coquereli
ENSRBIG00000035817	-	79	55.814	ENSPNAG00000008633	slirp	87	55.814	Pygocentrus_nattereri
ENSRBIG00000035817	-	100	92.453	ENSRROG00000036656	-	98	92.453	Rhinopithecus_roxellana
ENSRBIG00000035817	-	82	88.636	ENSRROG00000041312	-	84	88.636	Rhinopithecus_roxellana
ENSRBIG00000035817	-	82	90.909	ENSRROG00000017133	-	92	90.909	Rhinopithecus_roxellana
ENSRBIG00000035817	-	85	85.714	ENSRROG00000035604	-	91	85.714	Rhinopithecus_roxellana
ENSRBIG00000035817	-	83	78.652	ENSSBOG00000020014	SLIRP	84	79.487	Saimiri_boliviensis_boliviensis
ENSRBIG00000035817	-	71	51.948	ENSSFOG00015011165	slirp	78	51.948	Scleropages_formosus
ENSRBIG00000035817	-	68	44.595	ENSSMAG00000012930	slirp	73	44.595	Scophthalmus_maximus
ENSRBIG00000035817	-	68	58.108	ENSSLDG00000023136	slirp	67	58.108	Seriola_lalandi_dorsalis
ENSRBIG00000035817	-	78	55.294	ENSSPUG00000009346	SLIRP	84	54.878	Sphenodon_punctatus
ENSRBIG00000035817	-	68	50.000	ENSSPAG00000013477	slirp	74	50.000	Stegastes_partitus
ENSRBIG00000035817	-	100	66.972	ENSSSCG00000028167	SLIRP	88	66.327	Sus_scrofa
ENSRBIG00000035817	-	74	48.750	ENSTGUG00000012337	SLIRP	67	50.704	Taeniopygia_guttata
ENSRBIG00000035817	-	84	43.956	ENSTRUG00000020127	slirp	74	52.000	Takifugu_rubripes
ENSRBIG00000035817	-	100	71.560	ENSUAMG00000022445	SLIRP	88	69.388	Ursus_americanus
ENSRBIG00000035817	-	100	72.477	ENSUMAG00000007166	SLIRP	88	70.408	Ursus_maritimus
ENSRBIG00000035817	-	100	67.925	ENSVPAG00000001781	SLIRP	88	67.368	Vicugna_pacos
ENSRBIG00000035817	-	85	70.213	ENSVVUG00000004436	SLIRP	88	69.388	Vulpes_vulpes
ENSRBIG00000035817	-	64	60.000	ENSXETG00000030343	SLIRP	79	60.000	Xenopus_tropicalis
ENSRBIG00000035817	-	68	55.405	ENSXCOG00000009422	slirp	74	55.405	Xiphophorus_couchianus
ENSRBIG00000035817	-	68	56.757	ENSXMAG00000015655	slirp	74	56.757	Xiphophorus_maculatus