EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000037743 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 86894 bases
Position: chrMCGX01001328.1:3040786-3127679
Accession: 108526277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000027736	zf-CCCH	PF00642.24	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000051671	RC3H1-201	3644	XM_017866944	ENSRBIP00000027736	1134 (aa)	XP_017722433	A0A2K6LW32

Gene Model

Click here to download ENSRBIG00000037743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000037743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000037743	RC3H1	96	52.398	ENSRBIG00000032579	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000037743	RC3H1	100	99.206	ENSG00000135870	RC3H1	100	99.206	Homo_sapiens
ENSRBIG00000037743	RC3H1	100	97.002	ENSAMEG00000015657	RC3H1	100	97.002	Ailuropoda_melanoleuca
ENSRBIG00000037743	RC3H1	100	88.492	ENSAPLG00000005341	RC3H1	100	88.492	Anas_platyrhynchos
ENSRBIG00000037743	RC3H1	100	85.515	ENSACAG00000015271	RC3H1	100	85.515	Anolis_carolinensis
ENSRBIG00000037743	RC3H1	100	99.030	ENSANAG00000036716	RC3H1	100	99.030	Aotus_nancymaae
ENSRBIG00000037743	RC3H1	100	95.944	ENSBTAG00000052708	RC3H1	100	95.944	Bos_taurus
ENSRBIG00000037743	RC3H1	100	98.677	ENSCJAG00000009106	RC3H1	100	98.677	Callithrix_jacchus
ENSRBIG00000037743	RC3H1	100	97.090	ENSCAFG00000014434	RC3H1	100	97.090	Canis_familiaris
ENSRBIG00000037743	RC3H1	100	97.004	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSRBIG00000037743	RC3H1	100	96.296	ENSCHIG00000002873	RC3H1	100	96.296	Capra_hircus
ENSRBIG00000037743	RC3H1	99	95.503	ENSTSYG00000003913	RC3H1	99	95.503	Carlito_syrichta
ENSRBIG00000037743	RC3H1	100	91.454	ENSCPOG00000004349	RC3H1	100	91.366	Cavia_porcellus
ENSRBIG00000037743	RC3H1	100	96.914	ENSCCAG00000025652	RC3H1	100	96.914	Cebus_capucinus
ENSRBIG00000037743	RC3H1	100	99.824	ENSCATG00000033497	RC3H1	100	99.824	Cercocebus_atys
ENSRBIG00000037743	RC3H1	100	94.978	ENSCLAG00000011267	RC3H1	100	94.978	Chinchilla_lanigera
ENSRBIG00000037743	RC3H1	96	99.723	ENSCSAG00000011823	RC3H1	84	99.723	Chlorocebus_sabaeus
ENSRBIG00000037743	RC3H1	100	89.833	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSRBIG00000037743	RC3H1	100	99.735	ENSCANG00000032120	RC3H1	100	99.735	Colobus_angolensis_palliatus
ENSRBIG00000037743	RC3H1	100	94.356	ENSCGRG00001020812	Rc3h1	100	93.915	Cricetulus_griseus_chok1gshd
ENSRBIG00000037743	RC3H1	100	94.356	ENSCGRG00000011952	Rc3h1	100	93.915	Cricetulus_griseus_crigri
ENSRBIG00000037743	RC3H1	55	95.820	ENSDNOG00000011494	RC3H1	99	95.820	Dasypus_novemcinctus
ENSRBIG00000037743	RC3H1	100	95.944	ENSDORG00000004855	Rc3h1	100	95.944	Dipodomys_ordii
ENSRBIG00000037743	RC3H1	81	96.886	ENSETEG00000012064	RC3H1	87	96.886	Echinops_telfairi
ENSRBIG00000037743	RC3H1	100	96.032	ENSEASG00005017000	RC3H1	100	96.032	Equus_asinus_asinus
ENSRBIG00000037743	RC3H1	100	95.855	ENSECAG00000021208	RC3H1	100	95.855	Equus_caballus
ENSRBIG00000037743	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSRBIG00000037743	RC3H1	100	97.443	ENSFCAG00000014924	RC3H1	100	97.443	Felis_catus
ENSRBIG00000037743	RC3H1	100	87.511	ENSFALG00000002947	RC3H1	100	86.987	Ficedula_albicollis
ENSRBIG00000037743	RC3H1	100	95.154	ENSFDAG00000013303	RC3H1	100	95.154	Fukomys_damarensis
ENSRBIG00000037743	RC3H1	100	87.467	ENSGALG00000004587	RC3H1	100	87.467	Gallus_gallus
ENSRBIG00000037743	RC3H1	100	88.179	ENSGAGG00000018194	RC3H1	100	88.441	Gopherus_agassizii
ENSRBIG00000037743	RC3H1	100	92.355	ENSGGOG00000005735	RC3H1	100	92.355	Gorilla_gorilla
ENSRBIG00000037743	RC3H1	88	88.904	ENSHGLG00000004183	-	99	88.859	Heterocephalus_glaber_female
ENSRBIG00000037743	RC3H1	100	94.537	ENSHGLG00100008577	RC3H1	100	94.537	Heterocephalus_glaber_male
ENSRBIG00000037743	RC3H1	100	96.564	ENSSTOG00000016033	RC3H1	100	96.564	Ictidomys_tridecemlineatus
ENSRBIG00000037743	RC3H1	100	95.326	ENSJJAG00000018915	Rc3h1	100	95.150	Jaculus_jaculus
ENSRBIG00000037743	RC3H1	100	75.500	ENSLACG00000016186	RC3H1	100	78.699	Latimeria_chalumnae
ENSRBIG00000037743	RC3H1	97	97.543	ENSLAFG00000004367	RC3H1	100	97.543	Loxodonta_africana
ENSRBIG00000037743	RC3H1	100	99.647	ENSMFAG00000033725	RC3H1	100	99.647	Macaca_fascicularis
ENSRBIG00000037743	RC3H1	100	99.559	ENSMMUG00000000630	RC3H1	100	99.559	Macaca_mulatta
ENSRBIG00000037743	RC3H1	100	99.735	ENSMNEG00000035968	RC3H1	100	99.735	Macaca_nemestrina
ENSRBIG00000037743	RC3H1	100	99.647	ENSMLEG00000037455	RC3H1	100	99.647	Mandrillus_leucophaeus
ENSRBIG00000037743	RC3H1	97	94.556	ENSMAUG00000020864	Rc3h1	100	94.052	Mesocricetus_auratus
ENSRBIG00000037743	RC3H1	100	97.531	ENSMICG00000003000	RC3H1	100	97.531	Microcebus_murinus
ENSRBIG00000037743	RC3H1	93	93.094	ENSMOCG00000016587	Rc3h1	98	92.715	Microtus_ochrogaster
ENSRBIG00000037743	RC3H1	100	92.335	ENSMODG00000004289	RC3H1	100	92.423	Monodelphis_domestica
ENSRBIG00000037743	RC3H1	100	94.004	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.563	Mus_caroli
ENSRBIG00000037743	RC3H1	100	93.827	ENSMUSG00000040423	Rc3h1	100	93.386	Mus_musculus
ENSRBIG00000037743	RC3H1	100	93.651	MGP_PahariEiJ_G0027992	Rc3h1	100	93.210	Mus_pahari
ENSRBIG00000037743	RC3H1	100	93.651	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.210	Mus_spretus
ENSRBIG00000037743	RC3H1	100	96.740	ENSMPUG00000004747	RC3H1	100	96.740	Mustela_putorius_furo
ENSRBIG00000037743	RC3H1	100	95.591	ENSMLUG00000011127	RC3H1	100	95.591	Myotis_lucifugus
ENSRBIG00000037743	RC3H1	100	95.944	ENSNGAG00000011135	Rc3h1	100	95.944	Nannospalax_galili
ENSRBIG00000037743	RC3H1	100	99.118	ENSNLEG00000015327	RC3H1	100	99.118	Nomascus_leucogenys
ENSRBIG00000037743	RC3H1	99	82.862	ENSOPRG00000013068	RC3H1	99	82.951	Ochotona_princeps
ENSRBIG00000037743	RC3H1	100	94.626	ENSODEG00000014185	RC3H1	100	94.626	Octodon_degus
ENSRBIG00000037743	RC3H1	100	91.878	ENSOANG00000000924	RC3H1	100	91.790	Ornithorhynchus_anatinus
ENSRBIG00000037743	RC3H1	99	96.064	ENSOCUG00000004930	RC3H1	98	96.064	Oryctolagus_cuniculus
ENSRBIG00000037743	RC3H1	100	90.317	ENSOGAG00000004044	RC3H1	100	90.317	Otolemur_garnettii
ENSRBIG00000037743	RC3H1	100	96.754	ENSOARG00000013011	RC3H1	100	96.754	Ovis_aries
ENSRBIG00000037743	RC3H1	100	99.383	ENSPPAG00000039253	RC3H1	100	99.383	Pan_paniscus
ENSRBIG00000037743	RC3H1	100	96.737	ENSPPRG00000009007	RC3H1	100	96.737	Panthera_pardus
ENSRBIG00000037743	RC3H1	100	97.103	ENSPTIG00000015326	RC3H1	100	97.103	Panthera_tigris_altaica
ENSRBIG00000037743	RC3H1	100	99.383	ENSPTRG00000001702	RC3H1	100	99.383	Pan_troglodytes
ENSRBIG00000037743	RC3H1	100	99.647	ENSPANG00000008886	RC3H1	100	99.647	Papio_anubis
ENSRBIG00000037743	RC3H1	100	88.967	ENSPSIG00000016181	RC3H1	100	89.229	Pelodiscus_sinensis
ENSRBIG00000037743	RC3H1	100	93.827	ENSPEMG00000011966	Rc3h1	100	93.474	Peromyscus_maniculatus_bairdii
ENSRBIG00000037743	RC3H1	70	94.430	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSRBIG00000037743	RC3H1	100	95.855	ENSPPYG00000000490	RC3H1	98	98.565	Pongo_abelii
ENSRBIG00000037743	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSRBIG00000037743	RC3H1	83	96.798	ENSPCOG00000021795	RC3H1	96	96.798	Propithecus_coquereli
ENSRBIG00000037743	RC3H1	100	88.095	ENSPVAG00000007593	RC3H1	100	88.095	Pteropus_vampyrus
ENSRBIG00000037743	RC3H1	97	61.778	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSRBIG00000037743	RC3H1	100	99.735	ENSRROG00000036546	RC3H1	100	99.735	Rhinopithecus_roxellana
ENSRBIG00000037743	RC3H1	93	90.161	ENSSBOG00000010664	RC3H1	100	92.715	Saimiri_boliviensis_boliviensis
ENSRBIG00000037743	RC3H1	100	91.366	ENSSHAG00000007589	RC3H1	100	91.454	Sarcophilus_harrisii
ENSRBIG00000037743	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSRBIG00000037743	RC3H1	100	84.514	ENSSPUG00000018472	RC3H1	100	83.975	Sphenodon_punctatus
ENSRBIG00000037743	RC3H1	100	97.443	ENSSSCG00000015498	RC3H1	100	97.443	Sus_scrofa
ENSRBIG00000037743	RC3H1	100	87.642	ENSTGUG00000004090	RC3H1	100	87.642	Taeniopygia_guttata
ENSRBIG00000037743	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSRBIG00000037743	RC3H1	100	96.655	ENSTTRG00000008572	RC3H1	100	96.655	Tursiops_truncatus
ENSRBIG00000037743	RC3H1	100	96.384	ENSUAMG00000019525	RC3H1	100	96.384	Ursus_americanus
ENSRBIG00000037743	RC3H1	100	97.090	ENSUMAG00000020087	RC3H1	100	97.090	Ursus_maritimus
ENSRBIG00000037743	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSRBIG00000037743	RC3H1	100	96.749	ENSVVUG00000014201	RC3H1	100	96.749	Vulpes_vulpes
ENSRBIG00000037743	RC3H1	100	79.112	ENSXETG00000020030	rc3h1	100	78.659	Xenopus_tropicalis