EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000037780 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 115232 bases
Position: chrMCGX01005553.1:3619846-3735077
Accession: 108538537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000027846	Upf2	PF04050.14	8.2e-33	1	1
ENSRBIP00000027848	Upf2	PF04050.14	1.3e-32	1	1
ENSRBIP00000027848	MIF4G	PF02854.19	2.8e-80	1	3
ENSRBIP00000027848	MIF4G	PF02854.19	2.8e-80	2	3
ENSRBIP00000027848	MIF4G	PF02854.19	2.8e-80	3	3
ENSRBIP00000027846	MIF4G	PF02854.19	2.8e-80	1	3
ENSRBIP00000027846	MIF4G	PF02854.19	2.8e-80	2	3
ENSRBIP00000027846	MIF4G	PF02854.19	2.8e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000051783	UPF2-202	3753	-	ENSRBIP00000027848	1250 (aa)	-	A0A2K6LWH0
ENSRBIT00000051781	UPF2-201	3774	XM_017886701	ENSRBIP00000027846	1257 (aa)	XP_017742190	A0A2K6LWD8

Gene Model

Click here to download ENSRBIG00000037780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000037780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000037780	UPF2	100	98.425	ENSG00000151461	UPF2	99	98.425	Homo_sapiens
ENSRBIG00000037780	UPF2	100	77.273	ENSAPOG00000015837	UPF2	100	77.194	Acanthochromis_polyacanthus
ENSRBIG00000037780	UPF2	100	96.848	ENSAMEG00000004586	UPF2	99	96.848	Ailuropoda_melanoleuca
ENSRBIG00000037780	UPF2	100	81.328	ENSACIG00000018078	UPF2	100	81.328	Amphilophus_citrinellus
ENSRBIG00000037780	UPF2	100	81.328	ENSAOCG00000016766	UPF2	99	81.406	Amphiprion_ocellaris
ENSRBIG00000037780	UPF2	100	81.406	ENSAPEG00000019084	UPF2	99	81.484	Amphiprion_percula
ENSRBIG00000037780	UPF2	100	81.231	ENSATEG00000021677	UPF2	99	81.513	Anabas_testudineus
ENSRBIG00000037780	UPF2	100	86.210	ENSAPLG00000010287	UPF2	99	85.500	Anas_platyrhynchos
ENSRBIG00000037780	UPF2	100	91.017	ENSACAG00000009259	UPF2	99	90.701	Anolis_carolinensis
ENSRBIG00000037780	UPF2	100	87.579	ENSANAG00000028451	UPF2	99	85.928	Aotus_nancymaae
ENSRBIG00000037780	UPF2	100	80.141	ENSACLG00000012696	UPF2	99	81.562	Astatotilapia_calliptera
ENSRBIG00000037780	UPF2	100	81.911	ENSAMXG00000013700	UPF2	99	81.989	Astyanax_mexicanus
ENSRBIG00000037780	UPF2	100	96.690	ENSBTAG00000000288	UPF2	99	96.690	Bos_taurus
ENSRBIG00000037780	UPF2	100	98.110	ENSCJAG00000020685	UPF2	99	98.110	Callithrix_jacchus
ENSRBIG00000037780	UPF2	100	96.769	ENSCAFG00000004839	UPF2	99	96.769	Canis_familiaris
ENSRBIG00000037780	UPF2	100	95.321	ENSCAFG00020005882	UPF2	100	95.321	Canis_lupus_dingo
ENSRBIG00000037780	UPF2	100	96.769	ENSCHIG00000020359	UPF2	99	96.769	Capra_hircus
ENSRBIG00000037780	UPF2	100	96.927	ENSTSYG00000000935	UPF2	97	100.000	Carlito_syrichta
ENSRBIG00000037780	UPF2	91	85.246	ENSCAPG00000016658	UPF2	100	84.791	Cavia_aperea
ENSRBIG00000037780	UPF2	99	93.016	ENSCPOG00000008809	UPF2	99	93.492	Cavia_porcellus
ENSRBIG00000037780	UPF2	100	92.520	ENSCCAG00000035991	UPF2	99	92.520	Cebus_capucinus
ENSRBIG00000037780	UPF2	100	98.819	ENSCATG00000032679	UPF2	100	98.811	Cercocebus_atys
ENSRBIG00000037780	UPF2	100	96.217	ENSCLAG00000011434	UPF2	99	96.217	Chinchilla_lanigera
ENSRBIG00000037780	UPF2	100	98.740	ENSCSAG00000013372	UPF2	99	98.740	Chlorocebus_sabaeus
ENSRBIG00000037780	UPF2	87	99.554	ENSCHOG00000000422	UPF2	89	99.554	Choloepus_hoffmanni
ENSRBIG00000037780	UPF2	100	91.719	ENSCPBG00000027823	UPF2	100	91.562	Chrysemys_picta_bellii
ENSRBIG00000037780	UPF2	79	49.264	ENSCSAVG00000007772	-	79	50.446	Ciona_savignyi
ENSRBIG00000037780	UPF2	100	95.724	ENSCANG00000040396	UPF2	100	95.724	Colobus_angolensis_palliatus
ENSRBIG00000037780	UPF2	100	96.688	ENSCGRG00001019347	Upf2	99	96.688	Cricetulus_griseus_chok1gshd
ENSRBIG00000037780	UPF2	100	96.688	ENSCGRG00000017993	Upf2	99	96.688	Cricetulus_griseus_crigri
ENSRBIG00000037780	UPF2	91	79.655	ENSCSEG00000003520	UPF2	99	76.953	Cynoglossus_semilaevis
ENSRBIG00000037780	UPF2	99	80.881	ENSCVAG00000006167	UPF2	100	80.724	Cyprinodon_variegatus
ENSRBIG00000037780	UPF2	100	96.769	ENSDNOG00000018160	UPF2	99	96.769	Dasypus_novemcinctus
ENSRBIG00000037780	UPF2	100	96.215	ENSDORG00000002478	Upf2	99	96.215	Dipodomys_ordii
ENSRBIG00000037780	UPF2	89	35.614	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSRBIG00000037780	UPF2	72	100.000	ENSETEG00000011583	-	67	100.000	Echinops_telfairi
ENSRBIG00000037780	UPF2	65	72.483	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSRBIG00000037780	UPF2	100	96.769	ENSEASG00005019274	UPF2	99	97.516	Equus_asinus_asinus
ENSRBIG00000037780	UPF2	100	96.848	ENSECAG00000017022	UPF2	99	96.848	Equus_caballus
ENSRBIG00000037780	UPF2	82	93.569	ENSEEUG00000007819	UPF2	82	93.248	Erinaceus_europaeus
ENSRBIG00000037780	UPF2	100	79.750	ENSELUG00000012014	UPF2	99	80.482	Esox_lucius
ENSRBIG00000037780	UPF2	100	99.441	ENSFCAG00000005785	UPF2	99	96.612	Felis_catus
ENSRBIG00000037780	UPF2	100	91.095	ENSFALG00000001889	UPF2	98	91.489	Ficedula_albicollis
ENSRBIG00000037780	UPF2	100	96.215	ENSFDAG00000014348	UPF2	99	96.215	Fukomys_damarensis
ENSRBIG00000037780	UPF2	99	81.117	ENSFHEG00000009826	UPF2	99	81.087	Fundulus_heteroclitus
ENSRBIG00000037780	UPF2	91	83.060	ENSGMOG00000005557	UPF2	100	79.141	Gadus_morhua
ENSRBIG00000037780	UPF2	100	91.575	ENSGALG00000033772	UPF2	99	92.047	Gallus_gallus
ENSRBIG00000037780	UPF2	100	78.186	ENSGAFG00000020867	UPF2	99	80.156	Gambusia_affinis
ENSRBIG00000037780	UPF2	91	83.089	ENSGACG00000001080	UPF2	100	81.172	Gasterosteus_aculeatus
ENSRBIG00000037780	UPF2	100	91.805	ENSGAGG00000002700	UPF2	99	91.726	Gopherus_agassizii
ENSRBIG00000037780	UPF2	100	98.504	ENSGGOG00000001479	UPF2	100	98.494	Gorilla_gorilla
ENSRBIG00000037780	UPF2	100	80.063	ENSHBUG00000004249	UPF2	100	81.562	Haplochromis_burtoni
ENSRBIG00000037780	UPF2	100	96.139	ENSHGLG00000015176	-	99	96.139	Heterocephalus_glaber_female
ENSRBIG00000037780	UPF2	100	84.779	ENSHGLG00000003822	-	99	83.110	Heterocephalus_glaber_female
ENSRBIG00000037780	UPF2	100	92.581	ENSHGLG00100010036	UPF2	100	92.581	Heterocephalus_glaber_male
ENSRBIG00000037780	UPF2	100	79.533	ENSHCOG00000004025	UPF2	99	79.222	Hippocampus_comes
ENSRBIG00000037780	UPF2	100	80.923	ENSIPUG00000015524	UPF2	99	80.908	Ictalurus_punctatus
ENSRBIG00000037780	UPF2	100	96.688	ENSSTOG00000013075	UPF2	99	96.688	Ictidomys_tridecemlineatus
ENSRBIG00000037780	UPF2	100	95.817	ENSJJAG00000004913	Upf2	99	95.817	Jaculus_jaculus
ENSRBIG00000037780	UPF2	99	79.278	ENSKMAG00000001071	UPF2	99	81.132	Kryptolebias_marmoratus
ENSRBIG00000037780	UPF2	80	79.351	ENSLBEG00000000728	-	93	81.139	Labrus_bergylta
ENSRBIG00000037780	UPF2	100	79.673	ENSLBEG00000016394	-	99	81.606	Labrus_bergylta
ENSRBIG00000037780	UPF2	99	77.056	ENSLACG00000015945	UPF2	100	78.431	Latimeria_chalumnae
ENSRBIG00000037780	UPF2	99	82.873	ENSLOCG00000015698	UPF2	99	84.688	Lepisosteus_oculatus
ENSRBIG00000037780	UPF2	100	98.740	ENSMFAG00000043865	UPF2	99	98.740	Macaca_fascicularis
ENSRBIG00000037780	UPF2	100	98.740	ENSMMUG00000008241	UPF2	99	98.740	Macaca_mulatta
ENSRBIG00000037780	UPF2	81	98.244	ENSMNEG00000008062	UPF2	100	98.244	Macaca_nemestrina
ENSRBIG00000037780	UPF2	100	98.811	ENSMLEG00000036120	UPF2	100	98.811	Mandrillus_leucophaeus
ENSRBIG00000037780	UPF2	100	81.075	ENSMAMG00000018276	UPF2	99	81.279	Mastacembelus_armatus
ENSRBIG00000037780	UPF2	100	80.141	ENSMZEG00005021595	UPF2	99	81.562	Maylandia_zebra
ENSRBIG00000037780	UPF2	99	91.017	ENSMGAG00000004573	UPF2	99	91.489	Meleagris_gallopavo
ENSRBIG00000037780	UPF2	100	94.322	ENSMAUG00000016512	Upf2	99	94.322	Mesocricetus_auratus
ENSRBIG00000037780	UPF2	95	99.490	ENSMICG00000001716	UPF2	99	99.490	Microcebus_murinus
ENSRBIG00000037780	UPF2	100	96.057	ENSMOCG00000008263	Upf2	99	96.057	Microtus_ochrogaster
ENSRBIG00000037780	UPF2	100	79.030	ENSMMOG00000006528	UPF2	100	79.294	Mola_mola
ENSRBIG00000037780	UPF2	100	93.696	ENSMODG00000016794	UPF2	99	94.169	Monodelphis_domestica
ENSRBIG00000037780	UPF2	100	80.923	ENSMALG00000002663	UPF2	100	80.971	Monopterus_albus
ENSRBIG00000037780	UPF2	100	96.293	MGP_CAROLIEiJ_G0023157	Upf2	99	98.659	Mus_caroli
ENSRBIG00000037780	UPF2	100	96.293	ENSMUSG00000043241	Upf2	99	98.084	Mus_musculus
ENSRBIG00000037780	UPF2	100	95.899	MGP_PahariEiJ_G0019217	Upf2	99	97.701	Mus_pahari
ENSRBIG00000037780	UPF2	100	96.530	MGP_SPRETEiJ_G0024075	Upf2	99	98.084	Mus_spretus
ENSRBIG00000037780	UPF2	100	96.769	ENSMPUG00000001064	UPF2	99	96.769	Mustela_putorius_furo
ENSRBIG00000037780	UPF2	100	96.072	ENSMLUG00000000228	UPF2	100	96.072	Myotis_lucifugus
ENSRBIG00000037780	UPF2	100	80.063	ENSNBRG00000013629	UPF2	99	81.562	Neolamprologus_brichardi
ENSRBIG00000037780	UPF2	100	98.425	ENSNLEG00000012058	UPF2	99	98.425	Nomascus_leucogenys
ENSRBIG00000037780	UPF2	57	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSRBIG00000037780	UPF2	77	100.000	ENSOPRG00000006801	-	78	100.000	Ochotona_princeps
ENSRBIG00000037780	UPF2	100	94.953	ENSODEG00000001290	UPF2	99	94.637	Octodon_degus
ENSRBIG00000037780	UPF2	100	80.141	ENSONIG00000017991	UPF2	99	81.641	Oreochromis_niloticus
ENSRBIG00000037780	UPF2	100	96.082	ENSOCUG00000006230	UPF2	100	96.082	Oryctolagus_cuniculus
ENSRBIG00000037780	UPF2	100	80.203	ENSORLG00000017189	UPF2	99	80.938	Oryzias_latipes
ENSRBIG00000037780	UPF2	100	80.281	ENSORLG00020005969	UPF2	99	81.094	Oryzias_latipes_hni
ENSRBIG00000037780	UPF2	100	80.203	ENSORLG00015005713	UPF2	99	81.016	Oryzias_latipes_hsok
ENSRBIG00000037780	UPF2	100	77.223	ENSOMEG00000023420	UPF2	98	77.873	Oryzias_melastigma
ENSRBIG00000037780	UPF2	100	97.557	ENSOGAG00000005796	UPF2	99	97.557	Otolemur_garnettii
ENSRBIG00000037780	UPF2	100	96.617	ENSOARG00000014587	UPF2	99	96.617	Ovis_aries
ENSRBIG00000037780	UPF2	100	97.781	ENSPPAG00000037953	UPF2	100	97.781	Pan_paniscus
ENSRBIG00000037780	UPF2	100	96.612	ENSPPRG00000000690	UPF2	99	96.612	Panthera_pardus
ENSRBIG00000037780	UPF2	100	96.612	ENSPTIG00000008867	UPF2	99	96.612	Panthera_tigris_altaica
ENSRBIG00000037780	UPF2	100	98.504	ENSPTRG00000002291	UPF2	100	98.494	Pan_troglodytes
ENSRBIG00000037780	UPF2	100	98.740	ENSPANG00000023399	UPF2	100	98.732	Papio_anubis
ENSRBIG00000037780	UPF2	100	78.984	ENSPKIG00000025502	UPF2	99	80.938	Paramormyrops_kingsleyae
ENSRBIG00000037780	UPF2	59	89.907	ENSPSIG00000015158	UPF2	95	89.907	Pelodiscus_sinensis
ENSRBIG00000037780	UPF2	100	78.633	ENSPMGG00000005259	UPF2	100	79.497	Periophthalmus_magnuspinnatus
ENSRBIG00000037780	UPF2	93	90.671	ENSPEMG00000015731	Upf2	99	90.671	Peromyscus_maniculatus_bairdii
ENSRBIG00000037780	UPF2	100	93.302	ENSPCIG00000006656	UPF2	100	93.853	Phascolarctos_cinereus
ENSRBIG00000037780	UPF2	100	78.499	ENSPFOG00000017118	UPF2	99	80.703	Poecilia_formosa
ENSRBIG00000037780	UPF2	100	78.499	ENSPLAG00000005094	UPF2	99	80.703	Poecilia_latipinna
ENSRBIG00000037780	UPF2	100	78.499	ENSPMEG00000017009	UPF2	99	80.703	Poecilia_mexicana
ENSRBIG00000037780	UPF2	100	78.292	ENSPREG00000021880	UPF2	100	80.893	Poecilia_reticulata
ENSRBIG00000037780	UPF2	66	99.760	ENSPPYG00000002089	-	99	99.760	Pongo_abelii
ENSRBIG00000037780	UPF2	91	87.856	ENSPCAG00000000684	UPF2	90	87.580	Procavia_capensis
ENSRBIG00000037780	UPF2	100	95.400	ENSPCOG00000021656	UPF2	100	95.400	Propithecus_coquereli
ENSRBIG00000037780	UPF2	100	88.976	ENSPVAG00000017286	UPF2	99	88.819	Pteropus_vampyrus
ENSRBIG00000037780	UPF2	100	77.639	ENSPNYG00000017096	UPF2	100	79.141	Pundamilia_nyererei
ENSRBIG00000037780	UPF2	100	82.174	ENSPNAG00000009357	UPF2	99	82.330	Pygocentrus_nattereri
ENSRBIG00000037780	UPF2	100	90.338	ENSRNOG00000023593	Upf2	99	99.127	Rattus_norvegicus
ENSRBIG00000037780	UPF2	100	98.897	ENSRROG00000043547	UPF2	100	98.891	Rhinopithecus_roxellana
ENSRBIG00000037780	UPF2	100	97.951	ENSSBOG00000020012	UPF2	99	97.951	Saimiri_boliviensis_boliviensis
ENSRBIG00000037780	UPF2	100	79.219	ENSSFOG00015023788	upf2	100	80.796	Scleropages_formosus
ENSRBIG00000037780	UPF2	90	81.960	ENSSMAG00000007637	UPF2	100	79.131	Scophthalmus_maximus
ENSRBIG00000037780	UPF2	100	81.250	ENSSDUG00000017244	UPF2	99	81.484	Seriola_dumerili
ENSRBIG00000037780	UPF2	100	78.442	ENSSLDG00000016866	UPF2	100	78.802	Seriola_lalandi_dorsalis
ENSRBIG00000037780	UPF2	100	94.405	ENSSARG00000008615	UPF2	99	94.090	Sorex_araneus
ENSRBIG00000037780	UPF2	100	89.595	ENSSPUG00000014544	UPF2	99	89.277	Sphenodon_punctatus
ENSRBIG00000037780	UPF2	69	98.962	ENSSSCG00000011117	-	99	98.962	Sus_scrofa
ENSRBIG00000037780	UPF2	99	91.719	ENSTGUG00000002163	-	100	91.562	Taeniopygia_guttata
ENSRBIG00000037780	UPF2	100	80.499	ENSTRUG00000007519	UPF2	99	80.938	Takifugu_rubripes
ENSRBIG00000037780	UPF2	100	79.128	ENSTNIG00000004453	UPF2	99	78.767	Tetraodon_nigroviridis
ENSRBIG00000037780	UPF2	93	89.915	ENSTBEG00000012679	UPF2	93	89.915	Tupaia_belangeri
ENSRBIG00000037780	UPF2	100	96.690	ENSTTRG00000016388	UPF2	99	96.690	Tursiops_truncatus
ENSRBIG00000037780	UPF2	95	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSRBIG00000037780	UPF2	100	97.006	ENSUMAG00000012953	UPF2	95	97.006	Ursus_maritimus
ENSRBIG00000037780	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSRBIG00000037780	UPF2	100	96.690	ENSVVUG00000006166	UPF2	99	96.690	Vulpes_vulpes
ENSRBIG00000037780	UPF2	100	83.726	ENSXETG00000033103	UPF2	91	88.215	Xenopus_tropicalis
ENSRBIG00000037780	UPF2	92	82.991	ENSXCOG00000011604	UPF2	100	80.391	Xiphophorus_couchianus
ENSRBIG00000037780	UPF2	92	83.248	ENSXMAG00000017209	UPF2	99	80.391	Xiphophorus_maculatus