EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000038324 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 16519 bases
Position: chrMCGX01008952.1:433882-450400
Accession: 108544104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000028860	zf-CCCH	PF00642.24	1.1e-06	1	1
ENSRBIP00000028860	TRM	PF02005.16	5e-150	1	1
ENSRBIP00000028860	Met_10	PF02475.16	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000052806	TRMT1-201	2302	XM_017895059	ENSRBIP00000028860	661 (aa)	XP_017750548	A0A2K6LZA7

Gene Model

Click here to download ENSRBIG00000038324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000038324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000038324	TRMT1	95	73.885	ENSRBIG00000037505	-	99	73.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000038324	TRMT1	97	96.412	ENSG00000104907	TRMT1	100	95.812	Homo_sapiens
ENSRBIG00000038324	TRMT1	100	87.009	ENSAMEG00000012598	TRMT1	99	87.009	Ailuropoda_melanoleuca
ENSRBIG00000038324	TRMT1	87	59.860	ENSACIG00000018680	trmt1	88	59.860	Amphilophus_citrinellus
ENSRBIG00000038324	TRMT1	92	64.132	ENSAOCG00000006781	trmt1	89	64.132	Amphiprion_ocellaris
ENSRBIG00000038324	TRMT1	92	64.132	ENSAPEG00000007712	trmt1	89	64.132	Amphiprion_percula
ENSRBIG00000038324	TRMT1	87	68.412	ENSATEG00000001872	trmt1	84	68.412	Anabas_testudineus
ENSRBIG00000038324	TRMT1	89	67.233	ENSACAG00000003825	TRMT1	95	67.233	Anolis_carolinensis
ENSRBIG00000038324	TRMT1	98	89.587	ENSANAG00000023016	TRMT1	99	91.896	Aotus_nancymaae
ENSRBIG00000038324	TRMT1	86	65.149	ENSACLG00000010073	trmt1	92	65.149	Astatotilapia_calliptera
ENSRBIG00000038324	TRMT1	87	68.685	ENSAMXG00000012026	trmt1	85	68.685	Astyanax_mexicanus
ENSRBIG00000038324	TRMT1	100	86.556	ENSBTAG00000019325	TRMT1	94	86.556	Bos_taurus
ENSRBIG00000038324	TRMT1	80	39.963	WBGene00006613	trm-1	96	39.963	Caenorhabditis_elegans
ENSRBIG00000038324	TRMT1	98	89.368	ENSCJAG00000004566	TRMT1	99	89.368	Callithrix_jacchus
ENSRBIG00000038324	TRMT1	100	88.671	ENSCAFG00000017070	TRMT1	100	89.639	Canis_familiaris
ENSRBIG00000038324	TRMT1	99	87.786	ENSCAFG00020005397	TRMT1	100	85.196	Canis_lupus_dingo
ENSRBIG00000038324	TRMT1	100	86.425	ENSCHIG00000013569	TRMT1	100	86.425	Capra_hircus
ENSRBIG00000038324	TRMT1	97	84.161	ENSTSYG00000003207	TRMT1	99	84.018	Carlito_syrichta
ENSRBIG00000038324	TRMT1	85	80.392	ENSCAPG00000003355	TRMT1	98	80.392	Cavia_aperea
ENSRBIG00000038324	TRMT1	99	82.236	ENSCPOG00000011754	TRMT1	99	82.236	Cavia_porcellus
ENSRBIG00000038324	TRMT1	98	86.790	ENSCCAG00000022263	TRMT1	99	90.569	Cebus_capucinus
ENSRBIG00000038324	TRMT1	100	97.731	ENSCATG00000039850	TRMT1	100	97.731	Cercocebus_atys
ENSRBIG00000038324	TRMT1	87	77.189	ENSCATG00000038220	-	99	77.189	Cercocebus_atys
ENSRBIG00000038324	TRMT1	98	86.111	ENSCLAG00000015295	TRMT1	96	86.111	Chinchilla_lanigera
ENSRBIG00000038324	TRMT1	80	97.925	ENSCSAG00000006500	TRMT1	100	97.925	Chlorocebus_sabaeus
ENSRBIG00000038324	TRMT1	94	65.723	ENSCPBG00000023866	TRMT1	94	66.352	Chrysemys_picta_bellii
ENSRBIG00000038324	TRMT1	81	46.507	ENSCING00000002884	-	95	46.507	Ciona_intestinalis
ENSRBIG00000038324	TRMT1	83	45.668	ENSCSAVG00000010927	-	100	45.539	Ciona_savignyi
ENSRBIG00000038324	TRMT1	96	72.684	ENSCANG00000031650	-	99	72.769	Colobus_angolensis_palliatus
ENSRBIG00000038324	TRMT1	98	82.236	ENSCANG00000040631	TRMT1	99	82.236	Colobus_angolensis_palliatus
ENSRBIG00000038324	TRMT1	100	82.857	ENSCGRG00001022594	Trmt1	100	82.857	Cricetulus_griseus_chok1gshd
ENSRBIG00000038324	TRMT1	100	82.857	ENSCGRG00000017732	Trmt1	100	82.857	Cricetulus_griseus_crigri
ENSRBIG00000038324	TRMT1	86	67.133	ENSCSEG00000001643	trmt1	84	68.811	Cynoglossus_semilaevis
ENSRBIG00000038324	TRMT1	90	66.167	ENSCVAG00000011886	trmt1	89	66.167	Cyprinodon_variegatus
ENSRBIG00000038324	TRMT1	86	67.241	ENSDARG00000010978	trmt1	85	67.241	Danio_rerio
ENSRBIG00000038324	TRMT1	84	61.964	ENSDNOG00000048240	-	95	61.964	Dasypus_novemcinctus
ENSRBIG00000038324	TRMT1	99	83.866	ENSDORG00000014298	Trmt1	99	83.866	Dipodomys_ordii
ENSRBIG00000038324	TRMT1	77	47.592	FBgn0032430	CG6388	87	47.592	Drosophila_melanogaster
ENSRBIG00000038324	TRMT1	55	83.103	ENSETEG00000015483	-	55	83.103	Echinops_telfairi
ENSRBIG00000038324	TRMT1	78	53.606	ENSEBUG00000003449	trmt1	74	53.682	Eptatretus_burgeri
ENSRBIG00000038324	TRMT1	94	87.821	ENSEASG00005004050	TRMT1	100	87.441	Equus_asinus_asinus
ENSRBIG00000038324	TRMT1	94	88.141	ENSECAG00000016149	TRMT1	100	87.755	Equus_caballus
ENSRBIG00000038324	TRMT1	60	72.040	ENSEEUG00000014102	-	100	72.040	Erinaceus_europaeus
ENSRBIG00000038324	TRMT1	86	65.972	ENSELUG00000021659	trmt1	85	65.972	Esox_lucius
ENSRBIG00000038324	TRMT1	99	88.146	ENSFCAG00000000483	TRMT1	99	88.146	Felis_catus
ENSRBIG00000038324	TRMT1	99	83.661	ENSFDAG00000007386	TRMT1	99	83.661	Fukomys_damarensis
ENSRBIG00000038324	TRMT1	79	69.318	ENSFHEG00000012865	trmt1	88	69.318	Fundulus_heteroclitus
ENSRBIG00000038324	TRMT1	87	61.606	ENSGMOG00000006564	trmt1	98	62.129	Gadus_morhua
ENSRBIG00000038324	TRMT1	86	68.126	ENSGAFG00000011862	trmt1	88	68.126	Gambusia_affinis
ENSRBIG00000038324	TRMT1	87	64.223	ENSGACG00000000227	trmt1	92	64.696	Gasterosteus_aculeatus
ENSRBIG00000038324	TRMT1	94	65.566	ENSGAGG00000016432	TRMT1	93	65.566	Gopherus_agassizii
ENSRBIG00000038324	TRMT1	97	96.568	ENSGGOG00000014007	TRMT1	99	96.177	Gorilla_gorilla
ENSRBIG00000038324	TRMT1	88	57.931	ENSHBUG00000008821	trmt1	95	57.931	Haplochromis_burtoni
ENSRBIG00000038324	TRMT1	99	85.145	ENSHGLG00000015972	TRMT1	99	85.145	Heterocephalus_glaber_female
ENSRBIG00000038324	TRMT1	99	79.817	ENSHGLG00100018112	TRMT1	99	79.817	Heterocephalus_glaber_male
ENSRBIG00000038324	TRMT1	87	63.874	ENSHCOG00000009447	trmt1	88	63.874	Hippocampus_comes
ENSRBIG00000038324	TRMT1	86	66.781	ENSIPUG00000002899	trmt1	85	67.123	Ictalurus_punctatus
ENSRBIG00000038324	TRMT1	100	88.084	ENSSTOG00000012531	TRMT1	100	88.084	Ictidomys_tridecemlineatus
ENSRBIG00000038324	TRMT1	95	83.784	ENSJJAG00000017154	Trmt1	100	81.777	Jaculus_jaculus
ENSRBIG00000038324	TRMT1	86	68.301	ENSKMAG00000011809	trmt1	95	66.900	Kryptolebias_marmoratus
ENSRBIG00000038324	TRMT1	86	67.250	ENSLBEG00000012703	trmt1	84	67.250	Labrus_bergylta
ENSRBIG00000038324	TRMT1	87	58.348	ENSLACG00000014585	TRMT1	94	58.348	Latimeria_chalumnae
ENSRBIG00000038324	TRMT1	86	63.103	ENSLOCG00000006479	trmt1	97	63.966	Lepisosteus_oculatus
ENSRBIG00000038324	TRMT1	98	88.615	ENSLAFG00000014072	TRMT1	100	88.615	Loxodonta_africana
ENSRBIG00000038324	TRMT1	100	98.033	ENSMFAG00000033143	TRMT1	100	98.033	Macaca_fascicularis
ENSRBIG00000038324	TRMT1	99	91.463	ENSMMUG00000001167	TRMT1	100	91.463	Macaca_mulatta
ENSRBIG00000038324	TRMT1	100	97.882	ENSMNEG00000037867	TRMT1	100	97.882	Macaca_nemestrina
ENSRBIG00000038324	TRMT1	99	97.248	ENSMLEG00000016142	TRMT1	99	97.248	Mandrillus_leucophaeus
ENSRBIG00000038324	TRMT1	87	67.832	ENSMAMG00000004357	trmt1	85	67.832	Mastacembelus_armatus
ENSRBIG00000038324	TRMT1	86	65.674	ENSMZEG00005014510	trmt1	85	65.674	Maylandia_zebra
ENSRBIG00000038324	TRMT1	98	83.692	ENSMAUG00000011134	Trmt1	100	82.733	Mesocricetus_auratus
ENSRBIG00000038324	TRMT1	100	91.088	ENSMICG00000000793	TRMT1	100	91.088	Microcebus_murinus
ENSRBIG00000038324	TRMT1	98	84.105	ENSMOCG00000015895	Trmt1	100	82.733	Microtus_ochrogaster
ENSRBIG00000038324	TRMT1	86	66.025	ENSMMOG00000011097	trmt1	92	66.025	Mola_mola
ENSRBIG00000038324	TRMT1	92	76.190	ENSMODG00000011619	TRMT1	98	76.190	Monodelphis_domestica
ENSRBIG00000038324	TRMT1	100	82.282	MGP_CAROLIEiJ_G0031304	Trmt1	100	82.282	Mus_caroli
ENSRBIG00000038324	TRMT1	100	81.982	ENSMUSG00000001909	Trmt1	100	81.982	Mus_musculus
ENSRBIG00000038324	TRMT1	100	81.982	MGP_SPRETEiJ_G0032422	Trmt1	100	81.982	Mus_spretus
ENSRBIG00000038324	TRMT1	100	88.218	ENSMPUG00000004210	TRMT1	95	88.218	Mustela_putorius_furo
ENSRBIG00000038324	TRMT1	100	87.311	ENSMLUG00000012809	TRMT1	99	87.311	Myotis_lucifugus
ENSRBIG00000038324	TRMT1	100	82.406	ENSNGAG00000022486	Trmt1	100	82.406	Nannospalax_galili
ENSRBIG00000038324	TRMT1	75	68.955	ENSNBRG00000024376	trmt1	85	68.955	Neolamprologus_brichardi
ENSRBIG00000038324	TRMT1	82	96.133	ENSNLEG00000013019	-	99	94.845	Nomascus_leucogenys
ENSRBIG00000038324	TRMT1	90	76.254	ENSMEUG00000013756	TRMT1	100	76.254	Notamacropus_eugenii
ENSRBIG00000038324	TRMT1	79	89.858	ENSOPRG00000009471	-	79	89.858	Ochotona_princeps
ENSRBIG00000038324	TRMT1	99	85.145	ENSODEG00000010323	TRMT1	99	85.145	Octodon_degus
ENSRBIG00000038324	TRMT1	94	65.217	ENSONIG00000000400	trmt1	99	65.217	Oreochromis_niloticus
ENSRBIG00000038324	TRMT1	79	88.571	ENSOCUG00000021934	TRMT1	99	88.571	Oryctolagus_cuniculus
ENSRBIG00000038324	TRMT1	86	63.149	ENSORLG00000020074	trmt1	90	63.149	Oryzias_latipes
ENSRBIG00000038324	TRMT1	86	66.200	ENSORLG00020007561	trmt1	89	66.200	Oryzias_latipes_hni
ENSRBIG00000038324	TRMT1	86	66.550	ENSORLG00015006547	trmt1	86	66.550	Oryzias_latipes_hsok
ENSRBIG00000038324	TRMT1	86	66.725	ENSOMEG00000019343	trmt1	86	66.725	Oryzias_melastigma
ENSRBIG00000038324	TRMT1	95	87.342	ENSOGAG00000025576	TRMT1	99	87.342	Otolemur_garnettii
ENSRBIG00000038324	TRMT1	100	71.471	ENSOARG00000009397	TRMT1	94	71.772	Ovis_aries
ENSRBIG00000038324	TRMT1	98	79.846	ENSPPRG00000012117	TRMT1	100	79.846	Panthera_pardus
ENSRBIG00000038324	TRMT1	77	89.970	ENSPTIG00000008833	TRMT1	97	89.970	Panthera_tigris_altaica
ENSRBIG00000038324	TRMT1	97	71.163	ENSPTRG00000050421	-	98	71.163	Pan_troglodytes
ENSRBIG00000038324	TRMT1	99	96.177	ENSPTRG00000010557	TRMT1	99	96.177	Pan_troglodytes
ENSRBIG00000038324	TRMT1	99	98.171	ENSPANG00000009247	TRMT1	99	98.171	Papio_anubis
ENSRBIG00000038324	TRMT1	87	76.892	ENSPANG00000034058	-	98	76.892	Papio_anubis
ENSRBIG00000038324	TRMT1	87	68.990	ENSPKIG00000005309	trmt1	84	68.990	Paramormyrops_kingsleyae
ENSRBIG00000038324	TRMT1	85	60.106	ENSPSIG00000008762	TRMT1	80	60.106	Pelodiscus_sinensis
ENSRBIG00000038324	TRMT1	87	66.492	ENSPMGG00000019764	trmt1	90	66.492	Periophthalmus_magnuspinnatus
ENSRBIG00000038324	TRMT1	98	85.759	ENSPEMG00000016247	Trmt1	100	84.234	Peromyscus_maniculatus_bairdii
ENSRBIG00000038324	TRMT1	87	60.345	ENSPMAG00000004329	trmt1	90	60.345	Petromyzon_marinus
ENSRBIG00000038324	TRMT1	96	73.832	ENSPCIG00000019273	TRMT1	99	73.832	Phascolarctos_cinereus
ENSRBIG00000038324	TRMT1	86	69.877	ENSPFOG00000008527	trmt1	88	69.877	Poecilia_formosa
ENSRBIG00000038324	TRMT1	86	69.702	ENSPLAG00000018788	trmt1	87	72.287	Poecilia_latipinna
ENSRBIG00000038324	TRMT1	86	69.702	ENSPMEG00000013120	trmt1	88	69.702	Poecilia_mexicana
ENSRBIG00000038324	TRMT1	86	68.301	ENSPREG00000000211	trmt1	85	68.301	Poecilia_reticulata
ENSRBIG00000038324	TRMT1	97	96.568	ENSPPYG00000009622	TRMT1	99	96.177	Pongo_abelii
ENSRBIG00000038324	TRMT1	98	80.000	ENSPCAG00000003698	TRMT1	99	80.000	Procavia_capensis
ENSRBIG00000038324	TRMT1	99	91.437	ENSPCOG00000008653	TRMT1	99	91.437	Propithecus_coquereli
ENSRBIG00000038324	TRMT1	99	88.244	ENSPVAG00000015076	TRMT1	99	88.244	Pteropus_vampyrus
ENSRBIG00000038324	TRMT1	86	64.623	ENSPNYG00000013960	trmt1	92	64.623	Pundamilia_nyererei
ENSRBIG00000038324	TRMT1	80	68.815	ENSPNAG00000024859	trmt1	88	68.815	Pygocentrus_nattereri
ENSRBIG00000038324	TRMT1	95	83.886	ENSRNOG00000002914	Trmt1	99	83.886	Rattus_norvegicus
ENSRBIG00000038324	TRMT1	95	73.089	ENSRROG00000031847	-	98	73.011	Rhinopithecus_roxellana
ENSRBIG00000038324	TRMT1	100	99.849	ENSRROG00000028599	TRMT1	100	99.849	Rhinopithecus_roxellana
ENSRBIG00000038324	TRMT1	77	37.430	YDR120C	-	92	37.430	Saccharomyces_cerevisiae
ENSRBIG00000038324	TRMT1	98	87.558	ENSSBOG00000028861	TRMT1	99	90.244	Saimiri_boliviensis_boliviensis
ENSRBIG00000038324	TRMT1	89	77.172	ENSSHAG00000014381	TRMT1	99	74.960	Sarcophilus_harrisii
ENSRBIG00000038324	TRMT1	87	68.586	ENSSFOG00015004139	trmt1	84	68.586	Scleropages_formosus
ENSRBIG00000038324	TRMT1	86	67.247	ENSSMAG00000021136	trmt1	85	67.247	Scophthalmus_maximus
ENSRBIG00000038324	TRMT1	86	67.776	ENSSDUG00000012740	trmt1	84	67.776	Seriola_dumerili
ENSRBIG00000038324	TRMT1	86	67.601	ENSSLDG00000005971	trmt1	84	67.601	Seriola_lalandi_dorsalis
ENSRBIG00000038324	TRMT1	86	84.155	ENSSARG00000005138	TRMT1	100	84.155	Sorex_araneus
ENSRBIG00000038324	TRMT1	88	54.795	ENSSPUG00000001084	TRMT1	91	55.137	Sphenodon_punctatus
ENSRBIG00000038324	TRMT1	87	64.757	ENSSPAG00000007153	trmt1	94	64.757	Stegastes_partitus
ENSRBIG00000038324	TRMT1	96	89.342	ENSSSCG00000013744	TRMT1	100	89.342	Sus_scrofa
ENSRBIG00000038324	TRMT1	89	61.436	ENSTRUG00000010700	trmt1	89	61.770	Takifugu_rubripes
ENSRBIG00000038324	TRMT1	87	66.667	ENSTNIG00000018808	trmt1	98	66.667	Tetraodon_nigroviridis
ENSRBIG00000038324	TRMT1	97	85.426	ENSTTRG00000006379	TRMT1	99	84.954	Tursiops_truncatus
ENSRBIG00000038324	TRMT1	98	87.097	ENSUAMG00000022911	TRMT1	99	87.097	Ursus_americanus
ENSRBIG00000038324	TRMT1	96	87.441	ENSUMAG00000006027	TRMT1	100	87.441	Ursus_maritimus
ENSRBIG00000038324	TRMT1	100	88.671	ENSVVUG00000024177	TRMT1	100	88.671	Vulpes_vulpes
ENSRBIG00000038324	TRMT1	70	71.800	ENSXETG00000033863	TRMT1	92	71.800	Xenopus_tropicalis
ENSRBIG00000038324	TRMT1	86	68.651	ENSXCOG00000015733	trmt1	88	68.651	Xiphophorus_couchianus
ENSRBIG00000038324	TRMT1	87	68.118	ENSXMAG00000013823	trmt1	98	68.118	Xiphophorus_maculatus