EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000038325 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 2565 bases
Position: chrMCGX01001637.1:448436-451000
Accession: 108527309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000028862	Exo_endo_phos	PF03372.23	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000052808	APEX1-201	1551	XM_017868510	ENSRBIP00000028862	322 (aa)	XP_017723999	A0A2K6LZB0
ENSRBIT00000052812	APEX1-202	45	-	ENSRBIP00000028866	14 (aa)	-	A0A2K6LZB4

Gene Model

Click here to download ENSRBIG00000038325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000038325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000038325	APEX1	99	98.428	ENSG00000100823	APEX1	100	98.428	Homo_sapiens
ENSRBIG00000038325	APEX1	87	69.534	ENSAPOG00000017002	apex1	95	68.276	Acanthochromis_polyacanthus
ENSRBIG00000038325	APEX1	99	95.283	ENSAMEG00000005418	APEX1	100	95.283	Ailuropoda_melanoleuca
ENSRBIG00000038325	APEX1	86	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSRBIG00000038325	APEX1	87	69.534	ENSAOCG00000009649	apex1	94	68.276	Amphiprion_ocellaris
ENSRBIG00000038325	APEX1	87	69.534	ENSAPEG00000021453	apex1	94	68.276	Amphiprion_percula
ENSRBIG00000038325	APEX1	85	71.168	ENSATEG00000002883	apex1	97	66.772	Anabas_testudineus
ENSRBIG00000038325	APEX1	99	69.876	ENSACAG00000008099	APEX1	100	69.876	Anolis_carolinensis
ENSRBIG00000038325	APEX1	99	97.799	ENSANAG00000030117	APEX1	100	97.799	Aotus_nancymaae
ENSRBIG00000038325	APEX1	85	72.000	ENSACLG00000018441	apex1	99	67.405	Astatotilapia_calliptera
ENSRBIG00000038325	APEX1	99	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSRBIG00000038325	APEX1	99	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSRBIG00000038325	APEX1	79	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSRBIG00000038325	APEX1	99	98.113	ENSCJAG00000009726	APEX1	100	98.113	Callithrix_jacchus
ENSRBIG00000038325	APEX1	99	94.654	ENSCAFG00000032033	APEX1	100	94.654	Canis_familiaris
ENSRBIG00000038325	APEX1	99	94.654	ENSCAFG00020014377	-	100	94.654	Canis_lupus_dingo
ENSRBIG00000038325	APEX1	53	91.279	ENSCAFG00020023002	-	96	91.279	Canis_lupus_dingo
ENSRBIG00000038325	APEX1	97	74.679	ENSCHIG00000014537	-	99	74.679	Capra_hircus
ENSRBIG00000038325	APEX1	99	92.767	ENSCHIG00000007298	-	100	92.767	Capra_hircus
ENSRBIG00000038325	APEX1	99	94.340	ENSTSYG00000034813	APEX1	100	94.340	Carlito_syrichta
ENSRBIG00000038325	APEX1	84	88.192	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSRBIG00000038325	APEX1	99	94.025	ENSCPOG00000030909	APEX1	100	94.025	Cavia_porcellus
ENSRBIG00000038325	APEX1	99	85.220	ENSCCAG00000031931	-	100	85.220	Cebus_capucinus
ENSRBIG00000038325	APEX1	99	98.113	ENSCCAG00000033056	-	100	98.113	Cebus_capucinus
ENSRBIG00000038325	APEX1	99	99.371	ENSCATG00000015580	APEX1	100	99.371	Cercocebus_atys
ENSRBIG00000038325	APEX1	99	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSRBIG00000038325	APEX1	99	99.057	ENSCSAG00000016670	-	100	99.057	Chlorocebus_sabaeus
ENSRBIG00000038325	APEX1	99	99.057	ENSCSAG00000016685	-	100	99.057	Chlorocebus_sabaeus
ENSRBIG00000038325	APEX1	99	72.414	ENSCPBG00000009567	APEX1	100	72.414	Chrysemys_picta_bellii
ENSRBIG00000038325	APEX1	89	54.576	ENSCING00000008137	-	94	54.576	Ciona_intestinalis
ENSRBIG00000038325	APEX1	82	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSRBIG00000038325	APEX1	99	99.371	ENSCANG00000030726	APEX1	100	99.371	Colobus_angolensis_palliatus
ENSRBIG00000038325	APEX1	99	92.138	ENSCGRG00001017046	Apex1	100	92.138	Cricetulus_griseus_chok1gshd
ENSRBIG00000038325	APEX1	99	92.138	ENSCGRG00000008984	Apex1	100	92.138	Cricetulus_griseus_crigri
ENSRBIG00000038325	APEX1	98	65.094	ENSCSEG00000017499	apex1	99	65.094	Cynoglossus_semilaevis
ENSRBIG00000038325	APEX1	87	70.968	ENSCVAG00000022075	apex1	99	65.823	Cyprinodon_variegatus
ENSRBIG00000038325	APEX1	99	66.038	ENSDARG00000045843	apex1	100	66.038	Danio_rerio
ENSRBIG00000038325	APEX1	99	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSRBIG00000038325	APEX1	99	94.340	ENSDORG00000001616	Apex1	100	94.340	Dipodomys_ordii
ENSRBIG00000038325	APEX1	99	93.711	ENSETEG00000004855	-	100	93.711	Echinops_telfairi
ENSRBIG00000038325	APEX1	74	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSRBIG00000038325	APEX1	99	95.912	ENSEASG00005017489	APEX1	74	95.912	Equus_asinus_asinus
ENSRBIG00000038325	APEX1	99	95.912	ENSECAG00000022325	APEX1	82	95.912	Equus_caballus
ENSRBIG00000038325	APEX1	89	93.403	ENSEEUG00000012569	APEX1	100	93.403	Erinaceus_europaeus
ENSRBIG00000038325	APEX1	99	65.517	ENSELUG00000021706	apex1	100	65.517	Esox_lucius
ENSRBIG00000038325	APEX1	99	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSRBIG00000038325	APEX1	99	93.082	ENSFDAG00000006120	APEX1	100	93.082	Fukomys_damarensis
ENSRBIG00000038325	APEX1	98	67.405	ENSFHEG00000009031	apex1	83	67.405	Fundulus_heteroclitus
ENSRBIG00000038325	APEX1	98	62.264	ENSGMOG00000007943	apex1	99	62.264	Gadus_morhua
ENSRBIG00000038325	APEX1	98	67.089	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSRBIG00000038325	APEX1	98	64.873	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSRBIG00000038325	APEX1	99	71.787	ENSGAGG00000014999	APEX1	100	71.787	Gopherus_agassizii
ENSRBIG00000038325	APEX1	99	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSRBIG00000038325	APEX1	98	66.139	ENSHBUG00000005894	apex1	99	67.405	Haplochromis_burtoni
ENSRBIG00000038325	APEX1	99	94.025	ENSHGLG00000002848	APEX1	100	94.025	Heterocephalus_glaber_female
ENSRBIG00000038325	APEX1	99	94.025	ENSHGLG00100017878	APEX1	100	94.025	Heterocephalus_glaber_male
ENSRBIG00000038325	APEX1	98	66.144	ENSHCOG00000009961	apex1	99	66.144	Hippocampus_comes
ENSRBIG00000038325	APEX1	99	67.712	ENSIPUG00000005799	apex1	100	67.712	Ictalurus_punctatus
ENSRBIG00000038325	APEX1	99	93.711	ENSSTOG00000010096	APEX1	100	93.711	Ictidomys_tridecemlineatus
ENSRBIG00000038325	APEX1	99	79.874	ENSJJAG00000020465	-	96	83.893	Jaculus_jaculus
ENSRBIG00000038325	APEX1	99	93.711	ENSJJAG00000012067	-	100	93.711	Jaculus_jaculus
ENSRBIG00000038325	APEX1	99	83.962	ENSJJAG00000003660	-	100	83.962	Jaculus_jaculus
ENSRBIG00000038325	APEX1	87	71.326	ENSKMAG00000021171	apex1	99	66.139	Kryptolebias_marmoratus
ENSRBIG00000038325	APEX1	87	68.459	ENSLBEG00000010248	apex1	99	64.217	Labrus_bergylta
ENSRBIG00000038325	APEX1	99	66.981	ENSLACG00000008617	APEX1	100	66.981	Latimeria_chalumnae
ENSRBIG00000038325	APEX1	99	66.981	ENSLOCG00000015516	apex1	99	66.981	Lepisosteus_oculatus
ENSRBIG00000038325	APEX1	99	94.025	ENSLAFG00000021872	APEX1	100	94.025	Loxodonta_africana
ENSRBIG00000038325	APEX1	99	98.742	ENSMFAG00000002565	APEX1	100	98.742	Macaca_fascicularis
ENSRBIG00000038325	APEX1	99	99.057	ENSMMUG00000048039	APEX1	100	99.057	Macaca_mulatta
ENSRBIG00000038325	APEX1	99	99.057	ENSMNEG00000036944	APEX1	100	99.057	Macaca_nemestrina
ENSRBIG00000038325	APEX1	99	99.371	ENSMLEG00000042125	APEX1	100	99.371	Mandrillus_leucophaeus
ENSRBIG00000038325	APEX1	87	71.326	ENSMAMG00000023526	apex1	99	66.456	Mastacembelus_armatus
ENSRBIG00000038325	APEX1	85	72.000	ENSMZEG00005014187	apex1	99	67.405	Maylandia_zebra
ENSRBIG00000038325	APEX1	99	93.082	ENSMAUG00000013994	Apex1	100	93.082	Mesocricetus_auratus
ENSRBIG00000038325	APEX1	99	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSRBIG00000038325	APEX1	99	92.453	ENSMOCG00000013721	Apex1	100	92.453	Microtus_ochrogaster
ENSRBIG00000038325	APEX1	87	67.500	ENSMMOG00000010031	apex1	97	63.009	Mola_mola
ENSRBIG00000038325	APEX1	99	83.438	ENSMODG00000007125	APEX1	100	85.093	Monodelphis_domestica
ENSRBIG00000038325	APEX1	87	64.158	ENSMALG00000011699	apex1	79	62.799	Monopterus_albus
ENSRBIG00000038325	APEX1	98	94.006	MGP_CAROLIEiJ_G0019209	Apex1	99	94.006	Mus_caroli
ENSRBIG00000038325	APEX1	99	94.340	ENSMUSG00000035960	Apex1	100	94.340	Mus_musculus
ENSRBIG00000038325	APEX1	99	94.340	MGP_PahariEiJ_G0030232	Apex1	100	94.340	Mus_pahari
ENSRBIG00000038325	APEX1	99	94.340	MGP_SPRETEiJ_G0020101	Apex1	100	94.340	Mus_spretus
ENSRBIG00000038325	APEX1	99	93.750	ENSMLUG00000028957	APEX1	100	93.750	Myotis_lucifugus
ENSRBIG00000038325	APEX1	99	69.811	ENSNGAG00000021748	-	99	69.811	Nannospalax_galili
ENSRBIG00000038325	APEX1	99	92.767	ENSNGAG00000002725	-	100	92.767	Nannospalax_galili
ENSRBIG00000038325	APEX1	85	71.636	ENSNBRG00000005334	apex1	91	67.089	Neolamprologus_brichardi
ENSRBIG00000038325	APEX1	99	98.428	ENSNLEG00000010839	APEX1	100	98.428	Nomascus_leucogenys
ENSRBIG00000038325	APEX1	99	87.107	ENSMEUG00000014519	APEX1	100	87.107	Notamacropus_eugenii
ENSRBIG00000038325	APEX1	99	93.396	ENSOPRG00000014029	APEX1	100	93.396	Ochotona_princeps
ENSRBIG00000038325	APEX1	99	94.340	ENSODEG00000001703	-	100	94.340	Octodon_degus
ENSRBIG00000038325	APEX1	96	75.081	ENSODEG00000004777	-	99	75.081	Octodon_degus
ENSRBIG00000038325	APEX1	99	71.914	ENSODEG00000006583	-	100	71.914	Octodon_degus
ENSRBIG00000038325	APEX1	86	71.942	ENSONIG00000012089	apex1	99	67.722	Oreochromis_niloticus
ENSRBIG00000038325	APEX1	89	82.456	ENSOANG00000008836	APEX1	80	78.395	Ornithorhynchus_anatinus
ENSRBIG00000038325	APEX1	99	94.969	ENSOCUG00000005022	APEX1	100	94.969	Oryctolagus_cuniculus
ENSRBIG00000038325	APEX1	98	66.667	ENSORLG00000012378	apex1	99	66.667	Oryzias_latipes
ENSRBIG00000038325	APEX1	98	66.667	ENSORLG00020021371	apex1	99	66.667	Oryzias_latipes_hni
ENSRBIG00000038325	APEX1	98	66.667	ENSORLG00015020089	apex1	99	66.667	Oryzias_latipes_hsok
ENSRBIG00000038325	APEX1	98	66.667	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSRBIG00000038325	APEX1	99	94.654	ENSOGAG00000013335	-	100	94.654	Otolemur_garnettii
ENSRBIG00000038325	APEX1	97	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSRBIG00000038325	APEX1	99	91.824	ENSOARG00000019740	-	100	91.824	Ovis_aries
ENSRBIG00000038325	APEX1	96	88.961	ENSOARG00000001876	-	100	88.961	Ovis_aries
ENSRBIG00000038325	APEX1	98	78.165	ENSOARG00000014424	-	100	78.165	Ovis_aries
ENSRBIG00000038325	APEX1	99	98.742	ENSPPAG00000038760	APEX1	100	98.742	Pan_paniscus
ENSRBIG00000038325	APEX1	99	96.226	ENSPPRG00000011794	APEX1	100	96.226	Panthera_pardus
ENSRBIG00000038325	APEX1	99	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSRBIG00000038325	APEX1	99	98.742	ENSPTRG00000006093	APEX1	100	98.742	Pan_troglodytes
ENSRBIG00000038325	APEX1	99	99.371	ENSPANG00000022757	APEX1	100	99.371	Papio_anubis
ENSRBIG00000038325	APEX1	86	68.592	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSRBIG00000038325	APEX1	75	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSRBIG00000038325	APEX1	99	93.711	ENSPEMG00000019097	Apex1	100	93.711	Peromyscus_maniculatus_bairdii
ENSRBIG00000038325	APEX1	93	66.333	ENSPMAG00000007275	-	99	66.333	Petromyzon_marinus
ENSRBIG00000038325	APEX1	99	84.013	ENSPCIG00000023274	APEX1	100	85.047	Phascolarctos_cinereus
ENSRBIG00000038325	APEX1	87	72.043	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSRBIG00000038325	APEX1	87	71.685	ENSPLAG00000012779	apex1	99	66.772	Poecilia_latipinna
ENSRBIG00000038325	APEX1	87	72.043	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSRBIG00000038325	APEX1	87	71.326	ENSPREG00000014298	apex1	99	66.456	Poecilia_reticulata
ENSRBIG00000038325	APEX1	99	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSRBIG00000038325	APEX1	99	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSRBIG00000038325	APEX1	99	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSRBIG00000038325	APEX1	99	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSRBIG00000038325	APEX1	85	72.000	ENSPNYG00000023940	apex1	99	67.405	Pundamilia_nyererei
ENSRBIG00000038325	APEX1	92	65.541	ENSPNAG00000020897	apex1	96	65.424	Pygocentrus_nattereri
ENSRBIG00000038325	APEX1	99	93.396	ENSRNOG00000009663	Apex1	100	93.396	Rattus_norvegicus
ENSRBIG00000038325	APEX1	99	83.333	ENSSBOG00000031372	-	100	83.333	Saimiri_boliviensis_boliviensis
ENSRBIG00000038325	APEX1	99	97.799	ENSSBOG00000018921	-	100	97.799	Saimiri_boliviensis_boliviensis
ENSRBIG00000038325	APEX1	99	83.642	ENSSHAG00000013524	APEX1	100	84.663	Sarcophilus_harrisii
ENSRBIG00000038325	APEX1	86	66.426	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSRBIG00000038325	APEX1	86	69.424	ENSSMAG00000013348	apex1	99	65.300	Scophthalmus_maximus
ENSRBIG00000038325	APEX1	87	69.534	ENSSDUG00000016377	apex1	99	65.190	Seriola_dumerili
ENSRBIG00000038325	APEX1	87	70.251	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSRBIG00000038325	APEX1	92	71.525	ENSSPUG00000000531	APEX1	99	71.525	Sphenodon_punctatus
ENSRBIG00000038325	APEX1	87	69.892	ENSSPAG00000000458	apex1	96	67.918	Stegastes_partitus
ENSRBIG00000038325	APEX1	99	94.025	ENSSSCG00000040060	-	100	94.025	Sus_scrofa
ENSRBIG00000038325	APEX1	94	56.452	ENSSSCG00000039705	-	99	58.278	Sus_scrofa
ENSRBIG00000038325	APEX1	73	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSRBIG00000038325	APEX1	86	67.986	ENSTRUG00000004268	apex1	95	63.924	Takifugu_rubripes
ENSRBIG00000038325	APEX1	98	63.291	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSRBIG00000038325	APEX1	99	91.824	ENSTBEG00000006405	APEX1	100	91.824	Tupaia_belangeri
ENSRBIG00000038325	APEX1	73	94.915	ENSTTRG00000007860	APEX1	100	94.915	Tursiops_truncatus
ENSRBIG00000038325	APEX1	99	94.969	ENSUAMG00000010457	APEX1	100	94.969	Ursus_americanus
ENSRBIG00000038325	APEX1	99	94.969	ENSUMAG00000009178	APEX1	100	94.969	Ursus_maritimus
ENSRBIG00000038325	APEX1	73	89.831	ENSVPAG00000005083	APEX1	100	89.831	Vicugna_pacos
ENSRBIG00000038325	APEX1	99	94.340	ENSVVUG00000009010	APEX1	100	94.340	Vulpes_vulpes
ENSRBIG00000038325	APEX1	99	64.396	ENSXETG00000024773	apex1	100	66.563	Xenopus_tropicalis
ENSRBIG00000038325	APEX1	87	71.685	ENSXCOG00000015233	apex1	99	66.772	Xiphophorus_couchianus
ENSRBIG00000038325	APEX1	87	71.685	ENSXMAG00000006195	apex1	99	66.772	Xiphophorus_maculatus