EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000039982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: -
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 44254 bases
Position: chrMCGX01011121.1:34873-79126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000032356	La	PF05383.17	4.5e-22	1	1
ENSRBIP00000032355	La	PF05383.17	1e-21	1	1
ENSRBIP00000032352	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000056326	-	1569	-	ENSRBIP00000032352	522 (aa)	-	A0A2K6M9A8
ENSRBIT00000056329	-	1533	-	ENSRBIP00000032355	510 (aa)	-	A0A2K6M9B3
ENSRBIT00000056330	-	984	-	ENSRBIP00000032356	327 (aa)	-	A0A2K6M9A2

Gene Model

Click here to download ENSRBIG00000039982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000039982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000039982	-	98	51.948	ENSRBIG00000038005	LARP1	52	51.948
ENSRBIG00000039982	-	100	86.866	ENSRBIG00000038568	-	92	86.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000039982	-	100	96.332	ENSG00000138709	LARP1B	100	96.332	Homo_sapiens
ENSRBIG00000039982	-	97	50.926	ENSAPOG00000020101	larp1b	51	48.682	Acanthochromis_polyacanthus
ENSRBIG00000039982	-	100	90.149	ENSAMEG00000002748	LARP1B	100	90.149	Ailuropoda_melanoleuca
ENSRBIG00000039982	-	99	48.338	ENSAOCG00000014268	larp1b	52	50.395	Amphiprion_ocellaris
ENSRBIG00000039982	-	99	50.986	ENSAPEG00000004126	larp1b	50	49.821	Amphiprion_percula
ENSRBIG00000039982	-	99	49.081	ENSATEG00000017849	larp1b	50	50.738	Anabas_testudineus
ENSRBIG00000039982	-	98	62.687	ENSAPLG00000010129	LARP1B	58	63.138	Anas_platyrhynchos
ENSRBIG00000039982	-	98	73.359	ENSACAG00000011338	LARP1B	52	74.125	Anolis_carolinensis
ENSRBIG00000039982	-	99	89.505	ENSANAG00000034618	LARP1B	96	85.494	Aotus_nancymaae
ENSRBIG00000039982	-	98	89.091	ENSBTAG00000012135	LARP1B	99	86.538	Bos_taurus
ENSRBIG00000039982	-	100	95.367	ENSCJAG00000003338	LARP1B	100	95.367	Callithrix_jacchus
ENSRBIG00000039982	-	98	90.881	ENSCAFG00000003831	LARP1B	56	89.453	Canis_familiaris
ENSRBIG00000039982	-	100	90.746	ENSCAFG00020018899	LARP1B	100	90.746	Canis_lupus_dingo
ENSRBIG00000039982	-	100	87.500	ENSCHIG00000023144	LARP1B	100	87.500	Capra_hircus
ENSRBIG00000039982	-	98	83.283	ENSTSYG00000002037	-	93	84.195	Carlito_syrichta
ENSRBIG00000039982	-	76	91.964	ENSCPOG00000034668	-	93	91.964	Cavia_porcellus
ENSRBIG00000039982	-	100	95.560	ENSCCAG00000021948	LARP1B	100	95.560	Cebus_capucinus
ENSRBIG00000039982	-	100	95.367	ENSCATG00000013541	LARP1B	100	95.367	Cercocebus_atys
ENSRBIG00000039982	-	100	84.478	ENSCLAG00000006448	-	100	85.373	Chinchilla_lanigera
ENSRBIG00000039982	-	99	96.101	ENSCSAG00000003582	LARP1B	56	96.101	Chlorocebus_sabaeus
ENSRBIG00000039982	-	99	77.930	ENSCHOG00000005354	LARP1B	58	78.516	Choloepus_hoffmanni
ENSRBIG00000039982	-	100	87.838	ENSCANG00000026958	LARP1B	100	87.838	Colobus_angolensis_palliatus
ENSRBIG00000039982	-	100	87.761	ENSCGRG00001004660	-	100	88.358	Cricetulus_griseus_chok1gshd
ENSRBIG00000039982	-	100	87.463	ENSCGRG00000001914	-	100	88.060	Cricetulus_griseus_crigri
ENSRBIG00000039982	-	97	45.091	ENSCSEG00000013519	larp1b	50	48.545	Cynoglossus_semilaevis
ENSRBIG00000039982	-	99	48.619	ENSCVAG00000005046	larp1b	50	48.850	Cyprinodon_variegatus
ENSRBIG00000039982	-	98	86.626	ENSDNOG00000018765	-	100	86.106	Dasypus_novemcinctus
ENSRBIG00000039982	-	99	43.979	ENSEBUG00000003668	larp1b	55	43.902	Eptatretus_burgeri
ENSRBIG00000039982	-	99	91.018	ENSEASG00005018106	LARP1B	99	91.018	Equus_asinus_asinus
ENSRBIG00000039982	-	66	55.840	ENSELUG00000023774	larp1b	64	46.369	Esox_lucius
ENSRBIG00000039982	-	100	90.448	ENSFCAG00000014650	-	100	90.448	Felis_catus
ENSRBIG00000039982	-	98	67.477	ENSFALG00000008098	LARP1B	55	69.368	Ficedula_albicollis
ENSRBIG00000039982	-	98	69.725	ENSGALG00000010207	LARP1B	50	68.627	Gallus_gallus
ENSRBIG00000039982	-	87	53.404	ENSGAFG00000012012	larp1b	53	53.404	Gambusia_affinis
ENSRBIG00000039982	-	100	96.525	ENSGGOG00000015900	LARP1B	100	96.525	Gorilla_gorilla
ENSRBIG00000039982	-	97	75.000	ENSHGLG00000013922	-	96	76.012	Heterocephalus_glaber_female
ENSRBIG00000039982	-	100	82.891	ENSHGLG00000006728	-	99	84.366	Heterocephalus_glaber_female
ENSRBIG00000039982	-	97	75.000	ENSHGLG00100016491	-	96	76.012	Heterocephalus_glaber_male
ENSRBIG00000039982	-	100	83.582	ENSHGLG00100014041	-	96	84.776	Heterocephalus_glaber_male
ENSRBIG00000039982	-	95	69.782	ENSSTOG00000034510	-	87	72.274	Ictidomys_tridecemlineatus
ENSRBIG00000039982	-	100	86.310	ENSSTOG00000008596	-	100	87.202	Ictidomys_tridecemlineatus
ENSRBIG00000039982	-	93	66.557	ENSSTOG00000033183	-	99	66.557	Ictidomys_tridecemlineatus
ENSRBIG00000039982	-	99	80.805	ENSSTOG00000021917	-	94	80.805	Ictidomys_tridecemlineatus
ENSRBIG00000039982	-	99	83.483	ENSJJAG00000022360	Larp1b	99	84.685	Jaculus_jaculus
ENSRBIG00000039982	-	97	47.407	ENSKMAG00000011589	larp1b	50	49.536	Kryptolebias_marmoratus
ENSRBIG00000039982	-	99	70.428	ENSLACG00000015247	LARP1B	100	69.643	Latimeria_chalumnae
ENSRBIG00000039982	-	99	56.831	ENSLOCG00000010684	larp1b	54	60.291	Lepisosteus_oculatus
ENSRBIG00000039982	-	99	88.988	ENSLAFG00000008473	-	99	89.583	Loxodonta_africana
ENSRBIG00000039982	-	69	93.793	ENSMFAG00000003306	-	94	93.793	Macaca_fascicularis
ENSRBIG00000039982	-	100	97.683	ENSMFAG00000002218	LARP1B	100	97.683	Macaca_fascicularis
ENSRBIG00000039982	-	100	97.490	ENSMMUG00000021347	LARP1B	100	97.490	Macaca_mulatta
ENSRBIG00000039982	-	64	94.406	ENSMNEG00000027747	-	94	94.406	Macaca_nemestrina
ENSRBIG00000039982	-	84	91.401	ENSMNEG00000030406	LARP1B	52	91.667	Macaca_nemestrina
ENSRBIG00000039982	-	99	88.845	ENSMLEG00000009306	LARP1B	55	89.237	Mandrillus_leucophaeus
ENSRBIG00000039982	-	99	50.090	ENSMAMG00000000081	larp1b	51	50.995	Mastacembelus_armatus
ENSRBIG00000039982	-	85	52.980	ENSMZEG00005002545	larp1b	90	53.422	Maylandia_zebra
ENSRBIG00000039982	-	98	54.562	ENSMGAG00000004809	LARP1B	60	55.027	Meleagris_gallopavo
ENSRBIG00000039982	-	100	86.866	ENSMAUG00000007879	-	100	87.463	Mesocricetus_auratus
ENSRBIG00000039982	-	98	75.831	ENSMICG00000037883	-	90	75.831	Microcebus_murinus
ENSRBIG00000039982	-	98	68.431	ENSMICG00000028052	-	99	69.412	Microcebus_murinus
ENSRBIG00000039982	-	100	92.239	ENSMICG00000036111	LARP1B	100	92.239	Microcebus_murinus
ENSRBIG00000039982	-	80	92.015	ENSMOCG00000001490	Larp1b	95	92.015	Microtus_ochrogaster
ENSRBIG00000039982	-	99	49.453	ENSMALG00000003638	larp1b	51	50.817	Monopterus_albus
ENSRBIG00000039982	-	100	85.075	MGP_CAROLIEiJ_G0024962	Larp1b	100	86.269	Mus_caroli
ENSRBIG00000039982	-	100	86.269	ENSMUSG00000025762	Larp1b	100	87.463	Mus_musculus
ENSRBIG00000039982	-	100	85.970	MGP_PahariEiJ_G0026403	Larp1b	100	87.164	Mus_pahari
ENSRBIG00000039982	-	100	86.269	MGP_SPRETEiJ_G0025897	Larp1b	100	87.463	Mus_spretus
ENSRBIG00000039982	-	99	77.079	ENSMLUG00000010229	LARP1B	59	77.079	Myotis_lucifugus
ENSRBIG00000039982	-	100	96.718	ENSNLEG00000013819	LARP1B	100	96.718	Nomascus_leucogenys
ENSRBIG00000039982	-	98	73.860	ENSOPRG00000005478	LARP1B	56	67.704	Ochotona_princeps
ENSRBIG00000039982	-	100	85.672	ENSODEG00000001292	-	100	85.672	Octodon_degus
ENSRBIG00000039982	-	97	51.462	ENSONIG00000012386	larp1b	55	50.277	Oreochromis_niloticus
ENSRBIG00000039982	-	98	90.274	ENSOCUG00000013330	LARP1B	56	87.695	Oryctolagus_cuniculus
ENSRBIG00000039982	-	99	86.745	ENSOGAG00000005771	LARP1B	59	88.109	Otolemur_garnettii
ENSRBIG00000039982	-	98	88.182	ENSOARG00000015300	LARP1B	56	86.160	Ovis_aries
ENSRBIG00000039982	-	100	95.946	ENSPPAG00000030439	LARP1B	100	95.946	Pan_paniscus
ENSRBIG00000039982	-	100	90.448	ENSPPRG00000002743	-	100	90.448	Panthera_pardus
ENSRBIG00000039982	-	100	90.448	ENSPTIG00000011225	LARP1B	100	90.448	Panthera_tigris_altaica
ENSRBIG00000039982	-	100	96.139	ENSPTRG00000016437	LARP1B	100	96.139	Pan_troglodytes
ENSRBIG00000039982	-	100	97.297	ENSPANG00000012488	LARP1B	100	97.297	Papio_anubis
ENSRBIG00000039982	-	99	74.419	ENSPSIG00000012885	LARP1B	55	74.612	Pelodiscus_sinensis
ENSRBIG00000039982	-	99	44.727	ENSPMAG00000002700	larp1b	57	46.196	Petromyzon_marinus
ENSRBIG00000039982	-	99	82.685	ENSPCIG00000026516	LARP1B	87	82.727	Phascolarctos_cinereus
ENSRBIG00000039982	-	99	48.760	ENSPFOG00000019519	larp1b	50	49.378	Poecilia_formosa
ENSRBIG00000039982	-	97	51.306	ENSPFOG00000022837	-	77	51.306	Poecilia_formosa
ENSRBIG00000039982	-	82	54.577	ENSPREG00000005955	-	89	54.225	Poecilia_reticulata
ENSRBIG00000039982	-	98	84.802	ENSPCAG00000007546	LARP1B	56	83.594	Procavia_capensis
ENSRBIG00000039982	-	100	91.343	ENSPCOG00000021874	LARP1B	100	91.343	Propithecus_coquereli
ENSRBIG00000039982	-	99	82.779	ENSPVAG00000005373	LARP1B	57	82.387	Pteropus_vampyrus
ENSRBIG00000039982	-	100	87.463	ENSRNOG00000038366	Larp1b	100	88.657	Rattus_norvegicus
ENSRBIG00000039982	-	100	98.069	ENSRROG00000030771	LARP1B	100	98.069	Rhinopithecus_roxellana
ENSRBIG00000039982	-	100	77.015	ENSRROG00000038525	-	96	77.015	Rhinopithecus_roxellana
ENSRBIG00000039982	-	98	84.545	ENSSHAG00000014474	LARP1B	77	84.047	Sarcophilus_harrisii
ENSRBIG00000039982	-	98	50.000	ENSSMAG00000006347	larp1b	54	50.276	Scophthalmus_maximus
ENSRBIG00000039982	-	98	72.656	ENSSPUG00000011837	LARP1B	73	72.656	Sphenodon_punctatus
ENSRBIG00000039982	-	98	50.000	ENSSPAG00000017772	larp1b	51	48.606	Stegastes_partitus
ENSRBIG00000039982	-	99	48.457	ENSSSCG00000040491	-	84	62.963	Sus_scrofa
ENSRBIG00000039982	-	98	88.754	ENSSSCG00000034280	LARP1B	99	85.742	Sus_scrofa
ENSRBIG00000039982	-	73	71.618	ENSTGUG00000002098	-	53	65.145	Taeniopygia_guttata
ENSRBIG00000039982	-	98	46.607	ENSTNIG00000012398	larp1b	57	48.050	Tetraodon_nigroviridis
ENSRBIG00000039982	-	99	79.142	ENSTTRG00000012984	LARP1B	56	78.363	Tursiops_truncatus
ENSRBIG00000039982	-	100	79.403	ENSUAMG00000016938	-	88	95.706	Ursus_americanus
ENSRBIG00000039982	-	99	89.258	ENSUMAG00000007373	LARP1B	56	89.258	Ursus_maritimus
ENSRBIG00000039982	-	99	77.539	ENSVPAG00000007223	LARP1B	56	77.539	Vicugna_pacos
ENSRBIG00000039982	-	98	90.881	ENSVVUG00000011307	LARP1B	100	89.608	Vulpes_vulpes
ENSRBIG00000039982	-	99	55.854	ENSXETG00000022512	larp1b	51	55.854	Xenopus_tropicalis
ENSRBIG00000039982	-	97	50.926	ENSXMAG00000008150	larp1b	50	49.381	Xiphophorus_maculatus