EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000040007 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 36588 bases
Position: chrMCGX01005043.1:1032635-1069222
Accession: 108536839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000032480	RRM_1	PF00076.22	4.4e-09	1	1
ENSRBIP00000032478	RRM_1	PF00076.22	4.5e-09	1	1
ENSRBIP00000032466	RRM_1	PF00076.22	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000056456	SCAF4-203	3231	-	ENSRBIP00000032480	1076 (aa)	-	A0A2K6M9N7
ENSRBIT00000056442	SCAF4-201	3387	-	ENSRBIP00000032466	1128 (aa)	-	A0A2K6M9L4
ENSRBIT00000056454	SCAF4-202	3360	XM_017883888	ENSRBIP00000032478	1119 (aa)	XP_017739377	A0A2K6M9N0

Gene Model

Click here to download ENSRBIG00000040007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000040007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000040007	SCAF4	99	96.053	ENSG00000156304	SCAF4	99	96.053	Homo_sapiens
ENSRBIG00000040007	SCAF4	61	93.151	ENSAMEG00000014987	SCAF4	100	89.224	Ailuropoda_melanoleuca
ENSRBIG00000040007	SCAF4	99	73.974	ENSAPLG00000002509	SCAF4	58	82.884	Anas_platyrhynchos
ENSRBIG00000040007	SCAF4	94	70.070	ENSACAG00000002569	SCAF4	52	80.226	Anolis_carolinensis
ENSRBIG00000040007	SCAF4	99	95.526	ENSANAG00000037494	SCAF4	99	95.526	Aotus_nancymaae
ENSRBIG00000040007	SCAF4	92	48.311	ENSAMXG00000008585	scaf4a	59	62.620	Astyanax_mexicanus
ENSRBIG00000040007	SCAF4	99	89.860	ENSBTAG00000018855	SCAF4	99	90.237	Bos_taurus
ENSRBIG00000040007	SCAF4	100	95.648	ENSCJAG00000008993	SCAF4	99	95.702	Callithrix_jacchus
ENSRBIG00000040007	SCAF4	61	94.368	ENSCAFG00000008863	SCAF4	99	92.049	Canis_familiaris
ENSRBIG00000040007	SCAF4	99	88.958	ENSCAFG00020026019	SCAF4	100	91.214	Canis_lupus_dingo
ENSRBIG00000040007	SCAF4	99	88.860	ENSCHIG00000008385	SCAF4	99	89.658	Capra_hircus
ENSRBIG00000040007	SCAF4	91	94.604	ENSTSYG00000011344	SCAF4	99	94.604	Carlito_syrichta
ENSRBIG00000040007	SCAF4	61	91.629	ENSCPOG00000012443	SCAF4	99	87.609	Cavia_porcellus
ENSRBIG00000040007	SCAF4	99	95.610	ENSCCAG00000033727	SCAF4	99	95.610	Cebus_capucinus
ENSRBIG00000040007	SCAF4	100	96.394	ENSCATG00000030379	SCAF4	100	96.394	Cercocebus_atys
ENSRBIG00000040007	SCAF4	58	92.496	ENSCLAG00000006298	SCAF4	100	89.323	Chinchilla_lanigera
ENSRBIG00000040007	SCAF4	99	96.410	ENSCSAG00000009438	SCAF4	99	96.410	Chlorocebus_sabaeus
ENSRBIG00000040007	SCAF4	99	96.491	ENSCANG00000029847	SCAF4	99	96.491	Colobus_angolensis_palliatus
ENSRBIG00000040007	SCAF4	95	91.933	ENSCGRG00001020821	Scaf4	99	80.897	Cricetulus_griseus_chok1gshd
ENSRBIG00000040007	SCAF4	95	91.933	ENSCGRG00000014360	Scaf4	100	82.588	Cricetulus_griseus_crigri
ENSRBIG00000040007	SCAF4	63	45.652	ENSCSEG00000012808	-	72	47.188	Cynoglossus_semilaevis
ENSRBIG00000040007	SCAF4	78	50.875	ENSCSEG00000019549	scaf4a	52	54.386	Cynoglossus_semilaevis
ENSRBIG00000040007	SCAF4	61	94.521	ENSDNOG00000019014	SCAF4	93	87.577	Dasypus_novemcinctus
ENSRBIG00000040007	SCAF4	91	86.039	ENSETEG00000000583	SCAF4	99	77.666	Echinops_telfairi
ENSRBIG00000040007	SCAF4	61	95.890	ENSEASG00005007756	SCAF4	99	92.240	Equus_asinus_asinus
ENSRBIG00000040007	SCAF4	61	96.043	ENSECAG00000014248	SCAF4	99	92.416	Equus_caballus
ENSRBIG00000040007	SCAF4	61	94.064	ENSFCAG00000002228	SCAF4	99	90.965	Felis_catus
ENSRBIG00000040007	SCAF4	61	94.064	ENSFDAG00000017780	SCAF4	100	87.522	Fukomys_damarensis
ENSRBIG00000040007	SCAF4	100	75.460	ENSGALG00000033965	SCAF4	58	82.567	Gallus_gallus
ENSRBIG00000040007	SCAF4	65	95.298	ENSGGOG00000015557	SCAF4	99	93.925	Gorilla_gorilla
ENSRBIG00000040007	SCAF4	61	92.237	ENSHGLG00000010582	SCAF4	99	88.773	Heterocephalus_glaber_female
ENSRBIG00000040007	SCAF4	61	92.237	ENSHGLG00100009441	SCAF4	100	88.773	Heterocephalus_glaber_male
ENSRBIG00000040007	SCAF4	94	94.521	ENSSTOG00000004450	SCAF4	100	84.838	Ictidomys_tridecemlineatus
ENSRBIG00000040007	SCAF4	99	87.775	ENSJJAG00000019447	Scaf4	99	87.820	Jaculus_jaculus
ENSRBIG00000040007	SCAF4	77	51.728	ENSLBEG00000014675	scaf4a	54	54.823	Labrus_bergylta
ENSRBIG00000040007	SCAF4	61	60.000	ENSLACG00000013913	SCAF4	59	67.508	Latimeria_chalumnae
ENSRBIG00000040007	SCAF4	56	50.241	ENSLOCG00000009162	scaf4a	58	67.085	Lepisosteus_oculatus
ENSRBIG00000040007	SCAF4	100	88.536	ENSLAFG00000010710	SCAF4	99	90.845	Loxodonta_africana
ENSRBIG00000040007	SCAF4	100	96.658	ENSMFAG00000037668	SCAF4	100	96.658	Macaca_fascicularis
ENSRBIG00000040007	SCAF4	99	96.245	ENSMMUG00000001712	SCAF4	99	96.245	Macaca_mulatta
ENSRBIG00000040007	SCAF4	100	96.485	ENSMNEG00000032966	SCAF4	100	96.485	Macaca_nemestrina
ENSRBIG00000040007	SCAF4	99	96.500	ENSMLEG00000039674	SCAF4	100	96.500	Mandrillus_leucophaeus
ENSRBIG00000040007	SCAF4	99	74.737	ENSMGAG00000014515	SCAF4	58	82.726	Meleagris_gallopavo
ENSRBIG00000040007	SCAF4	61	91.020	ENSMAUG00000013307	Scaf4	100	86.631	Mesocricetus_auratus
ENSRBIG00000040007	SCAF4	99	95.272	ENSMICG00000005256	SCAF4	99	95.272	Microcebus_murinus
ENSRBIG00000040007	SCAF4	95	91.781	ENSMOCG00000012087	Scaf4	94	89.392	Microtus_ochrogaster
ENSRBIG00000040007	SCAF4	61	85.152	ENSMODG00000021040	SCAF4	99	83.393	Monodelphis_domestica
ENSRBIG00000040007	SCAF4	95	91.945	MGP_CAROLIEiJ_G0020944	Scaf4	94	88.960	Mus_caroli
ENSRBIG00000040007	SCAF4	95	91.324	ENSMUSG00000022983	Scaf4	94	88.432	Mus_musculus
ENSRBIG00000040007	SCAF4	95	89.474	MGP_PahariEiJ_G0016649	Scaf4	95	87.786	Mus_pahari
ENSRBIG00000040007	SCAF4	93	88.000	MGP_SPRETEiJ_G0021850	Scaf4	94	89.032	Mus_spretus
ENSRBIG00000040007	SCAF4	61	95.441	ENSMPUG00000001078	SCAF4	99	91.388	Mustela_putorius_furo
ENSRBIG00000040007	SCAF4	99	76.111	ENSMLUG00000011472	SCAF4	77	81.567	Myotis_lucifugus
ENSRBIG00000040007	SCAF4	99	87.175	ENSNGAG00000005214	Scaf4	99	89.298	Nannospalax_galili
ENSRBIG00000040007	SCAF4	99	95.877	ENSNLEG00000003569	SCAF4	99	95.877	Nomascus_leucogenys
ENSRBIG00000040007	SCAF4	76	95.652	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSRBIG00000040007	SCAF4	98	90.832	ENSODEG00000002718	SCAF4	99	87.392	Octodon_degus
ENSRBIG00000040007	SCAF4	70	56.915	ENSONIG00000004687	scaf4a	60	55.828	Oreochromis_niloticus
ENSRBIG00000040007	SCAF4	61	88.333	ENSOCUG00000008336	SCAF4	99	87.128	Oryctolagus_cuniculus
ENSRBIG00000040007	SCAF4	51	57.438	ENSORLG00000003420	scaf4b	65	57.143	Oryzias_latipes
ENSRBIG00000040007	SCAF4	88	95.434	ENSOGAG00000014653	SCAF4	93	93.585	Otolemur_garnettii
ENSRBIG00000040007	SCAF4	99	88.502	ENSOARG00000013894	SCAF4	98	88.996	Ovis_aries
ENSRBIG00000040007	SCAF4	99	96.759	ENSPPAG00000028535	SCAF4	99	96.053	Pan_paniscus
ENSRBIG00000040007	SCAF4	61	93.912	ENSPPRG00000000635	SCAF4	99	91.037	Panthera_pardus
ENSRBIG00000040007	SCAF4	61	91.324	ENSPTIG00000021578	SCAF4	99	88.298	Panthera_tigris_altaica
ENSRBIG00000040007	SCAF4	99	96.759	ENSPTRG00000013848	SCAF4	99	96.053	Pan_troglodytes
ENSRBIG00000040007	SCAF4	99	96.335	ENSPANG00000017332	SCAF4	99	96.335	Papio_anubis
ENSRBIG00000040007	SCAF4	62	60.000	ENSPKIG00000022408	scaf4a	88	65.934	Paramormyrops_kingsleyae
ENSRBIG00000040007	SCAF4	61	72.617	ENSPSIG00000014242	SCAF4	57	84.135	Pelodiscus_sinensis
ENSRBIG00000040007	SCAF4	99	96.300	ENSPPYG00000011355	SCAF4	100	96.300	Pongo_abelii
ENSRBIG00000040007	SCAF4	82	93.750	ENSPCAG00000009998	SCAF4	94	84.454	Procavia_capensis
ENSRBIG00000040007	SCAF4	99	90.088	ENSPCOG00000018710	SCAF4	99	94.370	Propithecus_coquereli
ENSRBIG00000040007	SCAF4	99	89.571	ENSPVAG00000005220	SCAF4	99	90.476	Pteropus_vampyrus
ENSRBIG00000040007	SCAF4	98	83.060	ENSRNOG00000002104	Scaf4	94	83.777	Rattus_norvegicus
ENSRBIG00000040007	SCAF4	99	96.842	ENSRROG00000029488	SCAF4	100	96.112	Rhinopithecus_roxellana
ENSRBIG00000040007	SCAF4	61	85.562	ENSSHAG00000001581	SCAF4	99	83.184	Sarcophilus_harrisii
ENSRBIG00000040007	SCAF4	60	45.345	ENSSFOG00015006338	scaf4a	54	58.365	Scleropages_formosus
ENSRBIG00000040007	SCAF4	66	56.777	ENSSMAG00000003738	scaf4b	54	69.006	Scophthalmus_maximus
ENSRBIG00000040007	SCAF4	58	59.341	ENSSDUG00000012380	scaf4b	53	69.939	Seriola_dumerili
ENSRBIG00000040007	SCAF4	58	59.341	ENSSLDG00000023152	-	53	69.939	Seriola_lalandi_dorsalis
ENSRBIG00000040007	SCAF4	99	87.325	ENSSARG00000009994	SCAF4	99	88.116	Sorex_araneus
ENSRBIG00000040007	SCAF4	61	90.729	ENSSSCG00000021023	SCAF4	99	88.384	Sus_scrofa
ENSRBIG00000040007	SCAF4	69	78.976	ENSTGUG00000013464	SCAF4	57	82.724	Taeniopygia_guttata
ENSRBIG00000040007	SCAF4	52	56.115	ENSTRUG00000009536	-	64	56.221	Takifugu_rubripes
ENSRBIG00000040007	SCAF4	58	53.261	ENSTNIG00000016885	SCAF8	56	46.154	Tetraodon_nigroviridis
ENSRBIG00000040007	SCAF4	65	52.941	ENSTNIG00000009945	scaf4a	53	68.889	Tetraodon_nigroviridis
ENSRBIG00000040007	SCAF4	61	92.846	ENSTTRG00000010963	SCAF4	99	89.938	Tursiops_truncatus
ENSRBIG00000040007	SCAF4	61	90.411	ENSUAMG00000008860	SCAF4	99	89.673	Ursus_americanus
ENSRBIG00000040007	SCAF4	99	87.986	ENSUMAG00000016962	SCAF4	100	91.503	Ursus_maritimus
ENSRBIG00000040007	SCAF4	61	94.368	ENSVVUG00000002953	SCAF4	100	92.049	Vulpes_vulpes
ENSRBIG00000040007	SCAF4	99	55.443	ENSXETG00000007351	scaf4	75	64.706	Xenopus_tropicalis