EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000040505 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 8821 bases
Position: chrMCGX01002647.1:815059-823879
Accession: 108529984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000033529	LSM	PF01423.22	1e-19	1	1
ENSRBIP00000033527	LSM	PF01423.22	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000057510	SNRPB-202	693	XM_017872546	ENSRBIP00000033529	230 (aa)	XP_017728035	A0A2K6MCL2
ENSRBIT00000057508	SNRPB-201	720	-	ENSRBIP00000033527	239 (aa)	-	A0A2K6MCM1

Gene Model

Click here to download ENSRBIG00000040505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000040505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000040505	SNRPB	73	96.429	ENSRBIG00000041765	SNRPN	70	96.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000040505	SNRPB	100	99.583	ENSG00000125835	SNRPB	100	99.583	Homo_sapiens
ENSRBIG00000040505	SNRPB	78	93.333	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSRBIG00000040505	SNRPB	99	99.582	ENSAMEG00000011353	SNRPB	98	99.582	Ailuropoda_melanoleuca
ENSRBIG00000040505	SNRPB	76	93.103	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSRBIG00000040505	SNRPB	78	93.333	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSRBIG00000040505	SNRPB	78	93.333	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSRBIG00000040505	SNRPB	78	92.778	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSRBIG00000040505	SNRPB	70	96.250	ENSACAG00000002053	SNRPB	69	96.250	Anolis_carolinensis
ENSRBIG00000040505	SNRPB	99	91.304	ENSANAG00000036271	-	68	92.857	Aotus_nancymaae
ENSRBIG00000040505	SNRPB	100	99.583	ENSANAG00000024443	-	100	99.583	Aotus_nancymaae
ENSRBIG00000040505	SNRPB	78	93.333	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSRBIG00000040505	SNRPB	73	92.857	ENSAMXG00000029434	snrpb	70	94.048	Astyanax_mexicanus
ENSRBIG00000040505	SNRPB	100	99.134	ENSBTAG00000001038	SNRPB	100	99.134	Bos_taurus
ENSRBIG00000040505	SNRPB	93	90.654	ENSCJAG00000023097	-	70	93.452	Callithrix_jacchus
ENSRBIG00000040505	SNRPB	100	99.567	ENSCJAG00000020971	-	100	99.567	Callithrix_jacchus
ENSRBIG00000040505	SNRPB	100	99.567	ENSCAFG00000006693	-	100	99.567	Canis_familiaris
ENSRBIG00000040505	SNRPB	79	88.043	ENSCAFG00000031109	-	72	84.393	Canis_familiaris
ENSRBIG00000040505	SNRPB	100	99.583	ENSCAFG00020016981	-	100	99.583	Canis_lupus_dingo
ENSRBIG00000040505	SNRPB	100	99.134	ENSCHIG00000025449	-	100	99.134	Capra_hircus
ENSRBIG00000040505	SNRPB	97	76.889	ENSTSYG00000032303	-	55	79.333	Carlito_syrichta
ENSRBIG00000040505	SNRPB	100	99.567	ENSTSYG00000014498	-	100	99.567	Carlito_syrichta
ENSRBIG00000040505	SNRPB	99	99.582	ENSCAPG00000012669	SNRPB	100	99.565	Cavia_aperea
ENSRBIG00000040505	SNRPB	100	99.567	ENSCPOG00000039408	SNRPB	100	99.567	Cavia_porcellus
ENSRBIG00000040505	SNRPB	100	99.583	ENSCCAG00000026002	SNRPB	100	99.583	Cebus_capucinus
ENSRBIG00000040505	SNRPB	55	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSRBIG00000040505	SNRPB	100	99.567	ENSCATG00000030230	SNRPB	100	99.567	Cercocebus_atys
ENSRBIG00000040505	SNRPB	100	98.333	ENSCLAG00000012442	SNRPB	100	98.333	Chinchilla_lanigera
ENSRBIG00000040505	SNRPB	100	99.567	ENSCSAG00000010840	SNRPB	100	99.567	Chlorocebus_sabaeus
ENSRBIG00000040505	SNRPB	100	96.250	ENSCPBG00000026801	SNRPB	100	96.250	Chrysemys_picta_bellii
ENSRBIG00000040505	SNRPB	100	99.583	ENSCANG00000019461	SNRPB	100	99.583	Colobus_angolensis_palliatus
ENSRBIG00000040505	SNRPB	100	99.567	ENSCGRG00001023046	Snrpb	100	99.567	Cricetulus_griseus_chok1gshd
ENSRBIG00000040505	SNRPB	96	99.548	ENSCGRG00000010423	Snrpb	98	99.548	Cricetulus_griseus_crigri
ENSRBIG00000040505	SNRPB	79	93.407	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSRBIG00000040505	SNRPB	73	92.857	ENSDARG00000011125	snrpb	69	94.643	Danio_rerio
ENSRBIG00000040505	SNRPB	75	94.186	ENSDNOG00000007896	-	71	94.186	Dasypus_novemcinctus
ENSRBIG00000040505	SNRPB	100	99.583	ENSDNOG00000015545	-	100	99.583	Dasypus_novemcinctus
ENSRBIG00000040505	SNRPB	97	99.103	ENSDORG00000029558	Snrpb	100	99.130	Dipodomys_ordii
ENSRBIG00000040505	SNRPB	65	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSRBIG00000040505	SNRPB	73	77.381	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSRBIG00000040505	SNRPB	80	78.919	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSRBIG00000040505	SNRPB	100	99.134	ENSEASG00005012991	SNRPB	100	99.134	Equus_asinus_asinus
ENSRBIG00000040505	SNRPB	100	99.567	ENSECAG00000011944	SNRPB	100	99.567	Equus_caballus
ENSRBIG00000040505	SNRPB	98	99.558	ENSEEUG00000015568	SNRPB	82	97.845	Erinaceus_europaeus
ENSRBIG00000040505	SNRPB	63	95.862	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSRBIG00000040505	SNRPB	100	99.567	ENSFCAG00000034090	-	100	99.567	Felis_catus
ENSRBIG00000040505	SNRPB	70	96.875	ENSFALG00000004866	SNRPB	69	96.875	Ficedula_albicollis
ENSRBIG00000040505	SNRPB	100	99.567	ENSFDAG00000009937	SNRPB	100	99.567	Fukomys_damarensis
ENSRBIG00000040505	SNRPB	73	97.024	ENSGALG00000035421	SNRPN	70	97.024	Gallus_gallus
ENSRBIG00000040505	SNRPB	75	93.023	ENSGAFG00000019558	snrpb	72	94.012	Gambusia_affinis
ENSRBIG00000040505	SNRPB	79	91.758	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSRBIG00000040505	SNRPB	100	96.250	ENSGAGG00000001308	SNRPB	100	96.250	Gopherus_agassizii
ENSRBIG00000040505	SNRPB	100	99.567	ENSGGOG00000016138	SNRPB	100	99.567	Gorilla_gorilla
ENSRBIG00000040505	SNRPB	78	93.333	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSRBIG00000040505	SNRPB	65	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSRBIG00000040505	SNRPB	100	99.567	ENSHGLG00000016241	-	100	99.567	Heterocephalus_glaber_female
ENSRBIG00000040505	SNRPB	100	99.583	ENSHGLG00100012877	-	100	99.583	Heterocephalus_glaber_male
ENSRBIG00000040505	SNRPB	65	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSRBIG00000040505	SNRPB	79	93.407	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSRBIG00000040505	SNRPB	73	92.857	ENSIPUG00000024569	SNRPB	70	94.643	Ictalurus_punctatus
ENSRBIG00000040505	SNRPB	93	82.326	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSRBIG00000040505	SNRPB	100	97.917	ENSSTOG00000033664	-	100	97.917	Ictidomys_tridecemlineatus
ENSRBIG00000040505	SNRPB	100	99.567	ENSJJAG00000024170	Snrpb	100	99.567	Jaculus_jaculus
ENSRBIG00000040505	SNRPB	75	94.220	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSRBIG00000040505	SNRPB	79	93.407	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSRBIG00000040505	SNRPB	79	92.350	ENSLACG00000011459	SNRPB	70	93.452	Latimeria_chalumnae
ENSRBIG00000040505	SNRPB	73	94.048	ENSLOCG00000002687	snrpb	70	95.238	Lepisosteus_oculatus
ENSRBIG00000040505	SNRPB	99	95.614	ENSLAFG00000017588	SNRPB	99	95.614	Loxodonta_africana
ENSRBIG00000040505	SNRPB	100	99.567	ENSMFAG00000038756	SNRPB	100	99.567	Macaca_fascicularis
ENSRBIG00000040505	SNRPB	100	99.567	ENSMMUG00000010050	SNRPB	100	99.567	Macaca_mulatta
ENSRBIG00000040505	SNRPB	100	99.567	ENSMNEG00000027954	SNRPB	100	99.567	Macaca_nemestrina
ENSRBIG00000040505	SNRPB	100	99.583	ENSMLEG00000022346	SNRPB	100	99.583	Mandrillus_leucophaeus
ENSRBIG00000040505	SNRPB	78	93.296	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSRBIG00000040505	SNRPB	78	93.333	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSRBIG00000040505	SNRPB	100	99.134	ENSMICG00000016519	SNRPB	100	99.134	Microcebus_murinus
ENSRBIG00000040505	SNRPB	78	89.503	ENSMICG00000015983	-	78	90.000	Microcebus_murinus
ENSRBIG00000040505	SNRPB	60	82.014	ENSMOCG00000021362	-	58	75.540	Microtus_ochrogaster
ENSRBIG00000040505	SNRPB	100	99.134	ENSMOCG00000002892	-	100	99.134	Microtus_ochrogaster
ENSRBIG00000040505	SNRPB	79	92.818	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSRBIG00000040505	SNRPB	78	92.778	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSRBIG00000040505	SNRPB	100	99.134	MGP_CAROLIEiJ_G0024293	Snrpb	100	99.134	Mus_caroli
ENSRBIG00000040505	SNRPB	100	99.134	ENSMUSG00000027404	Snrpb	100	99.134	Mus_musculus
ENSRBIG00000040505	SNRPB	100	99.134	MGP_PahariEiJ_G0025738	Snrpb	100	99.134	Mus_pahari
ENSRBIG00000040505	SNRPB	100	99.134	MGP_SPRETEiJ_G0025213	Snrpb	100	99.134	Mus_spretus
ENSRBIG00000040505	SNRPB	100	99.567	ENSMPUG00000009283	SNRPB	100	99.567	Mustela_putorius_furo
ENSRBIG00000040505	SNRPB	100	96.250	ENSMLUG00000016951	SNRPB	100	96.250	Myotis_lucifugus
ENSRBIG00000040505	SNRPB	100	99.567	ENSNGAG00000012051	Snrpb	100	99.567	Nannospalax_galili
ENSRBIG00000040505	SNRPB	78	90.556	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSRBIG00000040505	SNRPB	100	99.583	ENSNLEG00000029067	SNRPB	100	99.583	Nomascus_leucogenys
ENSRBIG00000040505	SNRPB	97	96.889	ENSMEUG00000015625	SNRPB	100	96.889	Notamacropus_eugenii
ENSRBIG00000040505	SNRPB	100	95.000	ENSODEG00000016060	-	100	95.000	Octodon_degus
ENSRBIG00000040505	SNRPB	100	99.567	ENSODEG00000004305	-	100	99.567	Octodon_degus
ENSRBIG00000040505	SNRPB	78	93.333	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSRBIG00000040505	SNRPB	100	99.167	ENSOCUG00000014042	-	100	99.167	Oryctolagus_cuniculus
ENSRBIG00000040505	SNRPB	74	96.491	ENSOCUG00000022423	-	86	96.429	Oryctolagus_cuniculus
ENSRBIG00000040505	SNRPB	100	96.667	ENSOCUG00000028215	-	100	96.667	Oryctolagus_cuniculus
ENSRBIG00000040505	SNRPB	93	93.488	ENSOCUG00000021456	-	70	96.429	Oryctolagus_cuniculus
ENSRBIG00000040505	SNRPB	91	71.905	ENSOCUG00000026813	-	63	70.946	Oryctolagus_cuniculus
ENSRBIG00000040505	SNRPB	78	92.778	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSRBIG00000040505	SNRPB	100	99.583	ENSOGAG00000016149	SNRPB	100	99.583	Otolemur_garnettii
ENSRBIG00000040505	SNRPB	100	99.134	ENSOARG00000006740	SNRPB	100	99.134	Ovis_aries
ENSRBIG00000040505	SNRPB	100	99.567	ENSPPAG00000036314	SNRPB	100	99.567	Pan_paniscus
ENSRBIG00000040505	SNRPB	100	99.583	ENSPPRG00000003233	-	100	99.583	Panthera_pardus
ENSRBIG00000040505	SNRPB	99	99.582	ENSPTIG00000007468	SNRPB	99	99.582	Panthera_tigris_altaica
ENSRBIG00000040505	SNRPB	100	99.567	ENSPTRG00000013176	SNRPB	100	99.567	Pan_troglodytes
ENSRBIG00000040505	SNRPB	100	99.583	ENSPANG00000020362	SNRPB	100	99.583	Papio_anubis
ENSRBIG00000040505	SNRPB	73	92.262	ENSPKIG00000002865	snrpb	70	94.048	Paramormyrops_kingsleyae
ENSRBIG00000040505	SNRPB	99	96.234	ENSPSIG00000014125	SNRPB	98	96.234	Pelodiscus_sinensis
ENSRBIG00000040505	SNRPB	77	90.960	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSRBIG00000040505	SNRPB	100	99.567	ENSPEMG00000007948	Snrpb	100	99.567	Peromyscus_maniculatus_bairdii
ENSRBIG00000040505	SNRPB	99	97.490	ENSPCIG00000004694	SNRPB	99	97.490	Phascolarctos_cinereus
ENSRBIG00000040505	SNRPB	65	95.973	ENSPFOG00000011802	snrpb	63	95.973	Poecilia_formosa
ENSRBIG00000040505	SNRPB	82	77.249	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSRBIG00000040505	SNRPB	100	99.567	ENSPPYG00000010841	SNRPB	100	99.567	Pongo_abelii
ENSRBIG00000040505	SNRPB	100	99.567	ENSPCOG00000013686	SNRPB	100	99.567	Propithecus_coquereli
ENSRBIG00000040505	SNRPB	98	98.238	ENSPVAG00000017013	SNRPB	80	98.238	Pteropus_vampyrus
ENSRBIG00000040505	SNRPB	78	93.333	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSRBIG00000040505	SNRPB	73	92.857	ENSPNAG00000016126	snrpb	70	94.643	Pygocentrus_nattereri
ENSRBIG00000040505	SNRPB	100	99.567	ENSRNOG00000006961	Snrpb	100	99.567	Rattus_norvegicus
ENSRBIG00000040505	SNRPB	100	99.583	ENSRROG00000036094	SNRPB	100	99.583	Rhinopithecus_roxellana
ENSRBIG00000040505	SNRPB	100	99.583	ENSSBOG00000027310	SNRPB	100	99.583	Saimiri_boliviensis_boliviensis
ENSRBIG00000040505	SNRPB	100	97.917	ENSSHAG00000010394	SNRPB	100	97.917	Sarcophilus_harrisii
ENSRBIG00000040505	SNRPB	73	92.262	ENSSFOG00015002870	snrpb	70	93.452	Scleropages_formosus
ENSRBIG00000040505	SNRPB	79	92.857	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSRBIG00000040505	SNRPB	78	93.333	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSRBIG00000040505	SNRPB	78	93.333	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSRBIG00000040505	SNRPB	74	84.795	ENSSARG00000003084	SNRPB	73	84.795	Sorex_araneus
ENSRBIG00000040505	SNRPB	99	96.234	ENSSPUG00000015659	SNRPB	100	96.234	Sphenodon_punctatus
ENSRBIG00000040505	SNRPB	78	93.333	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSRBIG00000040505	SNRPB	100	78.788	ENSSSCG00000011966	-	70	73.214	Sus_scrofa
ENSRBIG00000040505	SNRPB	100	99.134	ENSSSCG00000040857	-	100	99.134	Sus_scrofa
ENSRBIG00000040505	SNRPB	74	82.353	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSRBIG00000040505	SNRPB	79	92.308	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSRBIG00000040505	SNRPB	79	92.308	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSRBIG00000040505	SNRPB	75	100.000	ENSUAMG00000005984	-	82	100.000	Ursus_americanus
ENSRBIG00000040505	SNRPB	60	99.270	ENSUMAG00000002123	-	64	97.842	Ursus_maritimus
ENSRBIG00000040505	SNRPB	64	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSRBIG00000040505	SNRPB	100	99.167	ENSVVUG00000025654	-	100	99.167	Vulpes_vulpes
ENSRBIG00000040505	SNRPB	97	79.736	ENSVVUG00000010086	-	71	81.548	Vulpes_vulpes
ENSRBIG00000040505	SNRPB	73	96.429	ENSXETG00000027266	snrpb	71	96.429	Xenopus_tropicalis
ENSRBIG00000040505	SNRPB	74	78.947	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus