EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000040889 (Gene tree)
Gene ID: -
Gene Symbol: TRIM39
Alias: RNF23
Full Name: ribonuclease P/MRP subunit p21
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 21254 bases
Position: chrMCGX01022385.1:980819-1002072
Accession: 108522567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000034388	Rpr2	PF04032.16	4.5e-17	1	1
ENSRBIP00000034383	Rpr2	PF04032.16	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000058385	TRIM39-203	1951	XM_017862841	ENSRBIP00000034398	451 (aa)	XP_017718330	A0A2K6MF30
ENSRBIT00000058375	TRIM39-202	534	XM_017862848	ENSRBIP00000034388	177 (aa)	XP_017718337	A0A2K6MF17
ENSRBIT00000058370	TRIM39-201	1512	-	ENSRBIP00000034383	503 (aa)	-	A0A2K6MF10
ENSRBIT00000058391	TRIM39-204	3602	XM_017862830	ENSRBIP00000034403	488 (aa)	XP_017718319	A0A2K6MF34
ENSRBIT00000058392	TRIM39-205	1926	-	ENSRBIP00000034404	483 (aa)	-	A0A2K6MF38
ENSRBIT00000058398	TRIM39-206	1557	-	ENSRBIP00000034410	518 (aa)	-	A0A2K6MFA6

Gene Model

Click here to download ENSRBIG00000040889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000040889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000040889	TRIM39	100	98.608	ENSANAG00000032075	TRIM39	100	98.608	Aotus_nancymaae
ENSRBIG00000040889	TRIM39	100	98.012	ENSCJAG00000020681	TRIM39	100	98.012	Callithrix_jacchus
ENSRBIG00000040889	TRIM39	100	98.410	ENSCCAG00000036784	TRIM39	100	98.410	Cebus_capucinus
ENSRBIG00000040889	TRIM39	100	99.602	ENSCATG00000044044	TRIM39	100	99.602	Cercocebus_atys
ENSRBIG00000040889	TRIM39	100	99.006	ENSGGOG00000016403	TRIM39	100	99.006	Gorilla_gorilla
ENSRBIG00000040889	TRIM39	100	99.801	ENSMFAG00000046182	TRIM39	100	99.801	Macaca_fascicularis
ENSRBIG00000040889	TRIM39	100	99.801	ENSMMUG00000011682	RPP21	100	99.801	Macaca_mulatta
ENSRBIG00000040889	TRIM39	100	99.602	ENSMNEG00000034999	TRIM39	100	99.602	Macaca_nemestrina
ENSRBIG00000040889	TRIM39	100	99.801	ENSMLEG00000034263	TRIM39	100	99.801	Mandrillus_leucophaeus
ENSRBIG00000040889	TRIM39	100	99.006	ENSNLEG00000005026	TRIM39	100	99.006	Nomascus_leucogenys
ENSRBIG00000040889	TRIM39	100	99.205	ENSPPAG00000040674	TRIM39	100	99.205	Pan_paniscus
ENSRBIG00000040889	TRIM39	100	99.205	ENSPTRG00000017923	TRIM39	100	99.205	Pan_troglodytes
ENSRBIG00000040889	TRIM39	100	99.602	ENSPANG00000000655	TRIM39	100	99.602	Papio_anubis
ENSRBIG00000040889	TRIM39	100	100.000	ENSRROG00000036496	TRIM39	100	100.000	Rhinopithecus_roxellana